Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
17 4 5
18 4 5
19 4 5
20 4 5
4 16 20

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 27 57
Multiple Base Substitutions 0 0
Deletions 3 10
Insertions 2 3
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 32 70

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A17 F20 I1 R1 8 0 65.6 3244706 93.4% 3030555 134.0
A17 F32 I1 R1 4 0 43.9 2170362 93.3% 2024947 134.2
A17 F59 I1 R1 7 0 100.1 5087930 92.9% 4726686 132.0
A17 F78 I0 R1 655 0 32.3 1598088 93.5% 1494212 133.9
A17 F78 I1 R1 9 0 38.6 1823926 93.3% 1701722 140.1
A18 F18 I1 R1 4 0 25.1 1257950 92.6% 1164861 133.4
A18 F30 I1 R1 7 0 91.1 4372534 93.2% 4075201 139.0
A18 F49 I1 R1 6 0 58.4 2999582 92.3% 2768614 131.6
A18 F75 I0 R1 1242 0 81.3 3852684 94.3% 3633081 138.2
A18 F75 I3 R1 9 0 56.6 2796094 93.8% 2622736 134.1
A19 F19 I1 R1 5 0 38.1 1872856 93.1% 1743628 135.7
A19 F32 I1 R1 3 0 67.0 3326124 93.3% 3103273 134.3
A19 F50 I1 R1 5 0 69.0 3414384 93.2% 3182205 134.7
A19 F75 I0 R1 265 0 20.6 1018738 93.3% 950482 133.7
A19 F75 I3 R1 12 0 30.2 1412722 93.3% 1318069 141.4
A20 F20 I1 R1 4 0 89.6 4566530 92.6% 4228606 132.0
A20 F34 I1 R1 3 0 55.5 2640878 92.6% 2445453 140.6
A20 F50 I1 R1 8 0 314.8 14360826 94.2% 13527898 144.5
A20 F76 I0 R1 1136 0 49.2 2416972 93.3% 2255034 135.2
A20 F76 I3 R1 4 0 58.2 2676228 92.6% 2478187 145.5

Mutation Needle Plot

Mutation Targets

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