breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
MC JC | 2,399,465 | Δ7 bp | coding (650‑656/939 nt) | lrhA ← | transcriptional regulator LrhA |
RA | 4,267,830 | G→A | G145D (GGC→GAC) | soxR → | redox‑sensitive transcriptional activator SoxR |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | NZ_CP009273 | 29220 | 29252 | 33 | 2 [1] | [0] 2 | dapB/carA | 4‑hydroxy‑tetrahydrodipicolinate reductase/glutamine‑hydrolyzing carbamoyl‑phosphate synthase small subunit |
* | * | ÷ | NZ_CP009273 | 41995 | 42018 | 24 | 2 [0] | [0] 2 | caiT/fixA | L‑carnitine/gamma‑butyrobetaine antiporter/electron transfer flavoprotein FixA |
* | * | ÷ | NZ_CP009273 | 80516 | 80592 | 77 | 2 [0] | [0] 2 | leuL/leuO | leu operon leader peptide/transcriptional regulator LeuO |
* | * | ÷ | NZ_CP009273 | 153516 | 153742 | 227 | 2 [1] | [1] 3 | [folK] | [folK] |
* | * | ÷ | NZ_CP009273 | 230589 | 230604 | 16 | 2 [1] | [0] 2 | gloB | hydroxyacylglutathione hydrolase |
* | * | ÷ | NZ_CP009273 | 233675 | 233744 | 70 | 2 [1] | [0] 2 | BW25113_RS01085/BW25113_RS01090 | tRNA‑Asp/lipoprotein |
* | * | ÷ | NZ_CP009273 | 234967 | 235058 | 92 | 2 [1] | [0] 2 | BW25113_RS01095 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 237286 | 237303 | 18 | 2 [1] | [1] 2 | ivy | Ivy family C‑type lysozyme inhibitor |
* | * | ÷ | NZ_CP009273 | 243099 | 243129 | 31 | 2 [0] | [1] 4 | dinJ/yafL | type II toxin‑antitoxin system antitoxin DinJ/C40 family peptidase |
* | * | ÷ | NZ_CP009273 | 248455 | 248465 | 11 | 2 [0] | [1] 4 | dinB/yafN | DNA polymerase IV/type I toxin‑antitoxin system antitoxin YafN |
* | * | ÷ | NZ_CP009273 | 249823 | 249831 | 9 | 2 [1] | [0] 2 | yafP/BW25113_RS01190 | GNAT family N‑acetyltransferase/RtcB family protein |
* | * | ÷ | NZ_CP009273 | 255892 | 255959 | 68 | 2 [1] | [1] 4 | phoE/proB | phosphoporin PhoE/glutamate 5‑kinase |
* | * | ÷ | NZ_CP009273 | 280873 | 280971 | 99 | 3 [1] | [0] 2 | [yagF] | [yagF] |
* | * | ÷ | NZ_CP009273 | 290235 | 290268 | 34 | 2 [0] | [1] 5 | BW25113_RS01425 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 356969 | 357576 | 608 | 2 [1] | [1] 2 | [lacA] | [lacA] |
* | * | ÷ | NZ_CP009273 | 380320 | 380383 | 64 | 2 [0] | [0] 2 | BW25113_RS01880/tauA | PIG‑L family deacetylase/taurine ABC transporter substrate‑binding protein |
* | * | ÷ | NZ_CP009273 | 380423 | 380458 | 36 | 2 [0] | [0] 3 | BW25113_RS01880/tauA | PIG‑L family deacetylase/taurine ABC transporter substrate‑binding protein |
* | * | ÷ | NZ_CP009273 | 385319 | 385360 | 42 | 2 [1] | [1] 3 | hemB/BW25113_RS01915 | porphobilinogen synthase/outer membrane autotransporter barrel domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 385397 | 385447 | 51 | 3 [1] | [0] 2 | hemB/BW25113_RS01915 | porphobilinogen synthase/outer membrane autotransporter barrel domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 396578 | 396680 | 103 | 7 [1] | [1] 3 | [BW25113_RS25915] | [BW25113_RS25915] |
* | * | ÷ | NZ_CP009273 | 403980 | 403990 | 11 | 4 [0] | [0] 2 | ppnP/BW25113_RS02035 | pyrimidine/purine nucleoside phosphorylase/DUF2773 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 447292 | 447311 | 20 | 2 [1] | [1] 2 | cyoA/ampG | cytochrome o ubiquinol oxidase subunit II/muropeptide MFS transporter AmpG |
* | * | ÷ | NZ_CP009273 | 463827 | 463837 | 11 | 2 [0] | [1] 3 | cof/decR | HMP‑PP phosphatase/DNA‑binding transcriptional regulator DecR |
* | * | ÷ | NZ_CP009273 | 475470 | 475510 | 41 | 2 [1] | [1] 2 | maa/hha | maltose O‑acetyltransferase/HHA domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 476545 | 476605 | 61 | 2 [0] | [0] 7 | tomB/acrB | Hha toxicity modulator TomB/efflux RND transporter permease AcrB |
* | * | ÷ | NZ_CP009273 | 518450 | 518504 | 55 | 2 [0] | [0] 2 | ybbP/rhsD | ABC transporter permease/rhs element protein RhsD |
* | * | ÷ | NZ_CP009273 | 518587 | 518682 | 96 | 2 [0] | [1] 2 | ybbP/rhsD | ABC transporter permease/rhs element protein RhsD |
* | * | ÷ | NZ_CP009273 | 523020 | 523112 | 93 | 2 [0] | [1] 2 | [ybbC] | [ybbC] |
* | * | ÷ | NZ_CP009273 | 523344 | 523383 | 40 | 3 [1] | [1] 2 | ybbC | YbbC/YhhH family protein |
* | * | ÷ | NZ_CP009273 | 524124 | 524200 | 77 | 3 [1] | [1] 3 | BW25113_RS24960 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 524303 | 524344 | 42 | 2 [0] | [1] 2 | BW25113_RS24960 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 541988 | 542010 | 23 | 4 [0] | [1] 2 | allD/fdrA | ureidoglycolate dehydrogenase/acyl‑CoA synthetase FdrA |
* | * | ÷ | NZ_CP009273 | 553523 | 553576 | 54 | 2 [1] | [0] 2 | folD/fimA | bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD/type 1 fimbrial major subunit FimA |
* | * | ÷ | NZ_CP009273 | 553622 | 553669 | 48 | 2 [0] | [1] 3 | [fimA] | [fimA] |
* | * | ÷ | NZ_CP009273 | 554180 | 554209 | 30 | 3 [1] | [0] 2 | fimA | type 1 fimbrial major subunit FimA |
* | * | ÷ | NZ_CP009273 | 559290 | 559310 | 21 | 2 [0] | [1] 3 | [sfmF]–[fimZ] | [sfmF],[fimZ] |
* | * | ÷ | NZ_CP009273 | 564125 | 564327 | 203 | 2 [1] | [1] 5 | BW25113_RS25485 | BW25113_RS25485 |
* | * | ÷ | NZ_CP009273 | 565405 | 565535 | 131 | 2 [1] | [0] 2 | ybcK | recombinase family protein |
* | * | ÷ | NZ_CP009273 | 566296 | 566330 | 35 | 5 [1] | [1] 3 | ybcK/ybcL | recombinase family protein/Raf kinase inhibitor‑like protein YbcL |
* | * | ÷ | NZ_CP009273 | 567059 | 567077 | 19 | 3 [0] | [0] 2 | ybcM | helix‑turn‑helix transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 567365 | 567381 | 17 | 2 [1] | [0] 2 | ybcM | helix‑turn‑helix transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 574422 | 574454 | 33 | 2 [1] | [0] 4 | bor/ybcV | serum resistance lipoprotein Bor/DUF1398 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 574703 | 574706 | 4 | 2 [0] | [0] 3 | ybcV | DUF1398 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 576175 | 576184 | 10 | 3 [1] | [0] 2 | ylcI/nohD | YlcI/YnfO family protein/DNA‑packaging protein |
* | * | ÷ | NZ_CP009273 | 578270 | 578283 | 14 | 2 [0] | [0] 2 | [BW25113_RS02910] | [BW25113_RS02910] |
* | * | ÷ | NZ_CP009273 | 578673 | 578683 | 11 | 3 [1] | [0] 2 | BW25113_RS26085/appY | tail fiber assembly protein/DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 578762 | 578874 | 113 | 2 [0] | [1] 3 | BW25113_RS26085/appY | tail fiber assembly protein/DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 578930 | 578989 | 60 | 3 [1] | [1] 3 | BW25113_RS26085/appY | tail fiber assembly protein/DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 579043 | 579106 | 64 | 2 [0] | [1] 3 | BW25113_RS26085/appY | tail fiber assembly protein/DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 579165 | 579194 | 30 | 2 [0] | [0] 2 | appY | DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 579521 | 579582 | 62 | 2 [1] | [1] 3 | appY | DNA‑binding transcriptional activator AppY |
* | * | ÷ | NZ_CP009273 | 579890 | 579927 | 38 | 2 [0] | [0] 2 | appY/ompT | DNA‑binding transcriptional activator AppY/omptin family outer membrane protease OmpT |
* | * | ÷ | NZ_CP009273 | 608122 | 608149 | 28 | 2 [1] | [0] 2 | fepA/fes | siderophore enterobactin receptor FepA/enterochelin esterase |
* | * | ÷ | NZ_CP009273 | 632261 | 632325 | 65 | 2 [0] | [0] 2 | ybdO | LysR family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 633116 | 633158 | 43 | 2 [0] | [1] 3 | ybdO/dsbG | LysR family transcriptional regulator/thiol:disulfide interchange protein DsbG |
* | * | ÷ | NZ_CP009273 | 647582 | 647632 | 51 | 2 [1] | [0] 2 | citC/dpiB | [citrate (pro‑3S)‑lyase] ligase/sensor histidine kinase DpiB |
* | * | ÷ | NZ_CP009273 | 652575 | 652598 | 24 | 2 [1] | [0] 2 | pagP/cspE | lipid IV(A) palmitoyltransferase PagP/transcription antiterminator/RNA stability regulator CspE |
* | * | ÷ | NZ_CP009273 | 656846 | 656903 | 58 | 2 [0] | [1] 4 | ybeF/lipB | YbeF family transcriptional regulator/lipoyl(octanoyl) transferase LipB |
* | * | ÷ | NZ_CP009273 | 672161 | 672171 | 11 | 2 [0] | [1] 2 | [ybeR] | [ybeR] |
* | * | ÷ | NZ_CP009273 | 678738 | 678743 | 6 | 2 [0] | [1] 3 | hscC | molecular chaperone HscC |
* | * | ÷ | NZ_CP009273 | 703470 | 703526 | 57 | 2 [1] | [1] 3 | glnS/chiP | glutamine‑‑tRNA ligase/chitoporin |
* | * | ÷ | NZ_CP009273 | 716384 | 716412 | 29 | 2 [1] | [0] 2 | BW25113_RS26090/kdpE | leader peptide SpeFL/two‑component system response regulator KdpE |
* | * | ÷ | NZ_CP009273 | 716509 | 716526 | 18 | 2 [0] | [0] 2 | [kdpE] | [kdpE] |
* | * | ÷ | NZ_CP009273 | 729464 | 729477 | 14 | 2 [0] | [0] 2 | BW25113_RS03630 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 731634 | 731744 | 111 | 3 [1] | [0] 2 | [BW25113_RS03640] | [BW25113_RS03640] |
* | * | ÷ | NZ_CP009273 | 731782 | 731815 | 34 | 2 [0] | [0] 2 | BW25113_RS03640/ybfQ | hypothetical protein/ISAs1 family transposase |
* | * | ÷ | NZ_CP009273 | 731856 | 731891–731878 | 23–36 | 2 [0] | [1] 3 | BW25113_RS03640/ybfQ | hypothetical protein/ISAs1 family transposase |
* | * | ÷ | NZ_CP009273 | 748309 | 748376 | 68 | 2 [0] | [0] 2 | ybgD/gltA | fimbrial protein/citrate synthase |
* | * | ÷ | NZ_CP009273 | 748506 | 748602 | 97 | 2 [0] | [0] 3 | ybgD/gltA | fimbrial protein/citrate synthase |
* | * | ÷ | NZ_CP009273 | 750287 | 750322 | 36 | 3 [1] | [1] 3 | BW25113_RS25495/sdhC | hypothetical protein/succinate dehydrogenase cytochrome b556 subunit |
* | * | ÷ | NZ_CP009273 | 761360 | 761410 | 51 | 2 [1] | [1] 4 | mngR/mngA | mannosyl‑D‑glycerate transport/metabolism system transcriptional repressor MngR/PTS 2‑O‑a‑mannosyl‑D‑glycerate transporter subunit IIABC |
* | * | ÷ | NZ_CP009273 | 766519 | 766559 | 41 | 2 [1] | [0] 2 | mngB/cydA | mannosylglycerate hydrolase/cytochrome ubiquinol oxidase subunit I |
* | * | ÷ | NZ_CP009273 | 816194 | 816228 | 35 | 2 [1] | [1] 2 | ybhL/ybhM | Bax inhibitor‑1/YccA family protein/Bax inhibitor‑1/YccA family protein |
* | * | ÷ | NZ_CP009273 | 844514 | 844595 | 82 | 3 [1] | [1] 3 | dps/rhtA | DNA starvation/stationary phase protection protein Dps/threonine/homoserine exporter RhtA |
* | * | ÷ | NZ_CP009273 | 869141 | 869180 | 40 | 3 [1] | [0] 3 | pdeI | EAL domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 896133 | 896170 | 38 | 2 [0] | [1] 5 | artJ/artM | ABC transporter substrate‑binding protein ArtJ/arginine ABC transporter permease ArtM |
* | * | ÷ | NZ_CP009273 | 902983 | 903053 | 71 | 2 [1] | [1] 2 | ybjT | SDR family oxidoreductase |
* | * | ÷ | NZ_CP009273 | 909277 | 909300 | 24 | 2 [1] | [1] 2 | hcp/lysO | hydroxylamine reductase/L‑lysine exporter LysO |
* | * | ÷ | NZ_CP009273 | 950054 | 950110 | 57 | 3 [1] | [1] 3 | focA/ycaO | formate transporter FocA/30S ribosomal protein S12 methylthiotransferase accessory factor YcaO |
* | * | ÷ | NZ_CP009273 | 955675 | 955706 | 32 | 2 [1] | [0] 2 | aroA/ycaL | 3‑phosphoshikimate 1‑carboxyvinyltransferase/metallopeptidase YcaL |
* | * | ÷ | NZ_CP009273 | 982640 | 982789 | 150 | 2 [1] | [1] 3 | ompF/asnS | porin OmpF/asparagine‑‑tRNA ligase |
* | * | ÷ | NZ_CP009273 | 993025 | 993142 | 118 | 3 [1] | [1] 2 | ssuE/elfA | NADPH‑dependent FMN reductase/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 993268 | 993278 | 11 | 2 [0] | [0] 2 | ssuE/elfA | NADPH‑dependent FMN reductase/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 993818 | 993832 | 15 | 2 [1] | [0] 2 | elfA | fimbrial protein |
* | * | ÷ | NZ_CP009273 | 1015861 | 1015878 | 18 | 3 [1] | [0] 2 | [sulA] | [sulA] |
* | * | ÷ | NZ_CP009273 | 1059458 | 1059497 | 40 | 2 [0] | [0] 2 | [yccE] | [yccE] |
* | * | ÷ | NZ_CP009273 | 1088104 | 1088110 | 7 | 2 [0] | [1] 2 | pgaA/dgcT | poly‑beta‑1,6 N‑acetyl‑D‑glucosamine export porin PgaA/GGDEF domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1098823 | 1098975 | 153 | 3 [1] | [1] 2 | csgD/csgB | biofilm master transcriptional regulator CsgD/curli minor subunit CsgB |
* | * | ÷ | NZ_CP009273 | 1099147 | 1099201 | 55 | 3 [1] | [1] 3 | csgD/csgB | biofilm master transcriptional regulator CsgD/curli minor subunit CsgB |
* | * | ÷ | NZ_CP009273 | 1164383 | 1164448 | 66 | 3 [1] | [1] 5 | comR/bhsA | TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA |
* | * | ÷ | NZ_CP009273 | 1165841 | 1165869 | 29 | 3 [1] | [0] 3 | ldtC/mfd | L,D‑transpeptidase LdtC/transcription‑repair coupling factor |
* | * | ÷ | NZ_CP009273 | 1193059 | 1193247 | 189 | 2 [1] | [0] 2 | BW25113_RS05920 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1205761 | 1205837 | 77 | 3 [0] | [1] 2 | [mcrA] | [mcrA] |
* | * | ÷ | NZ_CP009273 | 1206732 | 1206749 | 18 | 2 [0] | [0] 2 | mcrA/BW25113_RS23640 | 5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1206789 | 1206794 | 6 | 2 [0] | [0] 2 | mcrA/BW25113_RS23640 | 5‑methylcytosine‑specific endonuclease McrA/isocitrate/isopropylmalate family dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1207098 | 1207152 | 55 | 3 [1] | [1] 2 | [iraM] | [iraM] |
* | * | ÷ | NZ_CP009273 | 1207280 | 1207287 | 8 | 2 [0] | [0] 2 | iraM | anti‑adapter protein IraM |
* | * | ÷ | NZ_CP009273 | 1207479 | 1207585 | 107 | 5 [1] | [1] 2 | iraM/BW25113_RS25985 | anti‑adapter protein IraM/protein YmgK |
* | * | ÷ | NZ_CP009273 | 1207707 | 1207820 | 114 | 2 [0] | [0] 2 | BW25113_RS25985 | BW25113_RS25985 |
* | * | ÷ | NZ_CP009273 | 1207965 | 1207967 | 3 | 2 [0] | [1] 3 | BW25113_RS25985/BW25113_RS25535 | protein YmgK/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1208176 | 1208197 | 22 | 2 [0] | [1] 2 | ycgX | DUF1398 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1209600 | 1209662 | 63 | 3 [1] | [1] 2 | bluR/bluF | DNA‑binding transcriptional repressor BluR/blue light‑responsive regulator BluF |
* | * | ÷ | NZ_CP009273 | 1211123 | 1211170 | 48 | 2 [1] | [0] 3 | bluF/ycgZ | blue light‑responsive regulator BluF/regulatory protein YcgZ |
* | * | ÷ | NZ_CP009273 | 1211762 | 1211815 | 54 | 2 [0] | [0] 3 | [ymgA] | [ymgA] |
* | * | ÷ | NZ_CP009273 | 1214881 | 1214938 | 58 | 3 [1] | [1] 3 | BW25113_RS06070/BW25113_RS25990 | hypothetical protein/autotransporter outer membrane beta‑barrel domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1218637 | 1218716 | 80 | 2 [1] | [1] 2 | BW25113_RS06100/BW25113_RS23645 | hypothetical protein/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1225849 | 1225943 | 95 | 2 [1] | [1] 2 | [hlyE] | [hlyE] |
* | * | ÷ | NZ_CP009273 | 1251666 | 1251774 | 109 | 2 [0] | [1] 2 | ycgV/ychF | autotransporter outer membrane beta‑barrel domain‑containing protein/redox‑regulated ATPase YchF |
* | * | ÷ | NZ_CP009273 | 1275090 | 1275125 | 36 | 3 [1] | [0] 4 | narK/narG | nitrate transporter NarK/nitrate reductase subunit alpha |
* | * | ÷ | NZ_CP009273 | 1293782 | 1293787 | 6 | 3 [0] | [0] 2 | adhE/ychE | bifunctional acetaldehyde‑CoA/alcohol dehydrogenase/protein YchT |
* | * | ÷ | NZ_CP009273 | 1294930 | 1294977 | 48 | 4 [0] | [0] 2 | BW25113_RS25865 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1308121 | 1308196 | 76 | 2 [0] | [1] 2 | BW25113_RS25555/ompW | YkgJ family cysteine cluster protein/outer membrane protein OmpW |
* | * | ÷ | NZ_CP009273 | 1309492 | 1309565 | 74 | 2 [1] | [1] 2 | [yciF] | [yciF] |
* | * | ÷ | NZ_CP009273 | 1310408 | 1310458 | 51 | 2 [0] | [0] 2 | yciG/trpA | general stress protein/tryptophan synthase subunit alpha |
* | * | ÷ | NZ_CP009273 | 1310595 | 1310634 | 40 | 2 [1] | [0] 3 | yciG/trpA | general stress protein/tryptophan synthase subunit alpha |
* | * | ÷ | NZ_CP009273 | 1327926 | 1328014 | 89 | 2 [1] | [1] 3 | topA/cysB | type I DNA topoisomerase/HTH‑type transcriptional regulator CysB |
* | * | ÷ | NZ_CP009273 | 1329154 | 1329216 | 63 | 3 [1] | [1] 2 | cysB/ymiA | HTH‑type transcriptional regulator CysB/YmiA family putative membrane protein |
* | * | ÷ | NZ_CP009273 | 1338609 | 1338670 | 62 | 2 [1] | [1] 5 | yciT/BW25113_RS06720 | DNA‑binding transcriptional regulator YciT/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1341089 | 1341151 | 63 | 4 [1] | [0] 2 | BW25113_RS25050 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1362244 | 1362283 | 40 | 2 [0] | [1] 3 | pspF/pspA | phage shock protein operon transcriptional activator/phage shock protein PspA |
* | * | ÷ | NZ_CP009273 | 1390000 | 1390016 | 17 | 2 [1] | [1] 2 | ynaI | low conductance mechanosensitive channel YnaI |
* | * | ÷ | NZ_CP009273 | 1407378 | 1407383 | 6 | 2 [0] | [0] 3 | intR | site‑specific integrase |
* | * | ÷ | NZ_CP009273 | 1407791 | 1407801 | 11 | 2 [1] | [0] 2 | rcbA | double‑strand break reduction protein RcbA |
* | * | ÷ | NZ_CP009273 | 1417974 | 1418036 | 63 | 2 [0] | [0] 2 | BW25113_RS26130/trkG | hypothetical protein/Trk system potassium transporter TrkG |
* | * | ÷ | NZ_CP009273 | 1428687 | 1428687 | 1 | 2 [0] | [0] 2 | BW25113_RS25575/uspF | hypothetical protein/universal stress protein UspF |
* | * | ÷ | NZ_CP009273 | 1431297 | 1431371 | 75 | 2 [0] | [1] 5 | ompN/nifJ | porin OmpN/pyruvate:ferredoxin (flavodoxin) oxidoreductase |
* | * | ÷ | NZ_CP009273 | 1437096 | 1437180 | 85 | 2 [1] | [1] 2 | [ldhA] | [ldhA] |
* | * | ÷ | NZ_CP009273 | 1448028 | 1448038 | 11 | 2 [0] | [1] 2 | paaZ/paaA | phenylacetic acid degradation bifunctional protein PaaZ/1,2‑phenylacetyl‑CoA epoxidase subunit A |
* | * | ÷ | NZ_CP009273 | 1459333 | 1459559 | 227 | 2 [1] | [1] 3 | BW25113_RS25580 | BW25113_RS25580 |
* | * | ÷ | NZ_CP009273 | 1485766 | 1485806 | 41 | 2 [0] | [1] 4 | cybB/BW25113_RS07445 | cytochrome b561/periplasmic protein |
* | * | ÷ | NZ_CP009273 | 1489385 | 1489418 | 34 | 2 [0] | [1] 2 | ydcI/ydcJ | LysR substrate‑binding domain‑containing protein/VOC family protein |
* | * | ÷ | NZ_CP009273 | 1494791 | 1494846 | 56 | 2 [1] | [1] 3 | [tehA] | [tehA] |
* | * | ÷ | NZ_CP009273 | 1521134 | 1521169 | 36 | 3 [1] | [0] 2 | yncG/yncH | glutathione S‑transferase family protein/YncH family protein |
* | * | ÷ | NZ_CP009273 | 1521283 | 1521293 | 11 | 2 [0] | [0] 4 | yncH | YncH family protein |
* | * | ÷ | NZ_CP009273 | 1521872 | 1521981 | 110 | 2 [0] | [1] 2 | yncH/BW25113_RS07645 | YncH family protein/RHS repeat protein |
* | * | ÷ | NZ_CP009273 | 1524202 | 1524252 | 51 | 3 [1] | [0] 2 | BW25113_RS07645/BW25113_RS26145 | RHS repeat protein/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1524312 | 1524378 | 67 | 2 [0] | [1] 3 | BW25113_RS07645/BW25113_RS26145 | RHS repeat protein/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1524422 | 1524465 | 44 | 3 [1] | [0] 2 | BW25113_RS26145 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1524696 | 1524723 | 28 | 2 [1] | [0] 2 | BW25113_RS25600 | protein YncO |
* | * | ÷ | NZ_CP009273 | 1524865 | 1524908 | 44 | 3 [1] | [1] 2 | BW25113_RS07655 | ISAs1 family transposase |
* | * | ÷ | NZ_CP009273 | 1538801 | 1538825 | 25 | 2 [0] | [1] 2 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1539018 | 1539082 | 65 | 3 [1] | [0] 2 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1539131 | 1539134 | 4 | 2 [0] | [0] 2 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1539206 | 1539324 | 119 | 2 [0] | [1] 2 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1539486 | 1539515 | 30 | 2 [1] | [1] 2 | BW25113_RS07710 | leucine‑rich repeat domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1540393 | 1540480 | 88 | 2 [1] | [1] 2 | yddL/yddG | porin/aromatic amino acid efflux DMT transporter YddG |
* | * | ÷ | NZ_CP009273 | 1566365 | 1566467 | 103 | 3 [1] | [0] 4 | gadB/pqqL | glutamate decarboxylase/insulinase family protein |
* | * | ÷ | NZ_CP009273 | 1573662 | 1573698 | 37 | 2 [1] | [1] 2 | yddA/BW25113_RS25610 | ABC transporter ATP‑binding protein/permease/protein YneP |
* | * | ÷ | NZ_CP009273 | 1576860 | 1576864 | 5 | 5 [0] | [0] 2 | ydeN/ydeO | sulfatase/acid stress response transcriptional regulator YdeO |
* | * | ÷ | NZ_CP009273 | 1577976 | 1578041 | 66 | 2 [1] | [1] 2 | [safA] | [safA] |
* | * | ÷ | NZ_CP009273 | 1580830 | 1580846 | 17 | 6 [1] | [0] 2 | ydeP/ydeQ | acid resistance putative oxidoreductase YdeP/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 1580882 | 1581029 | 148 | 2 [0] | [0] 4 | ydeP/ydeQ | acid resistance putative oxidoreductase YdeP/fimbrial protein |
* | * | ÷ | NZ_CP009273 | 1581483 | 1581518 | 36 | 3 [1] | [0] 2 | ydeQ | fimbrial protein |
* | * | ÷ | NZ_CP009273 | 1592426 | 1592560 | 135 | 2 [0] | [1] 2 | BW25113_RS07915/lsrK | ECSE_1600 family autotransporter/autoinducer‑2 kinase |
* | * | ÷ | NZ_CP009273 | 1592678 | 1592693 | 16 | 2 [0] | [1] 2 | BW25113_RS07915/lsrK | ECSE_1600 family autotransporter/autoinducer‑2 kinase |
* | * | ÷ | NZ_CP009273 | 1618881 | 1618976 | 96 | 2 [1] | [0] 2 | ydeI/ydeJ | YdeI family stress tolerance OB fold protein/2‑oxo‑tetronate isomerase |
* | * | ÷ | NZ_CP009273 | 1626888 | 1626949 | 62 | 2 [1] | [1] 3 | ydfJ/BW25113_RS25615 | MHS family MFS transporter/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1627113 | 1627138 | 26 | 2 [0] | [1] 5 | ydfJ/BW25113_RS25615 | MHS family MFS transporter/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1631293 | 1631352 | 60 | 3 [1] | [1] 3 | [ydfO] | [ydfO] |
* | * | ÷ | NZ_CP009273 | 1631835 | 1631873 | 39 | 2 [0] | [1] 2 | [gnsB] | [gnsB] |
* | * | ÷ | NZ_CP009273 | 1631964 | 1632000 | 37 | 2 [1] | [0] 2 | gnsB | addiction module toxin, GnsA/GnsB family |
* | * | ÷ | NZ_CP009273 | 1632566 | 1632571 | 6 | 2 [1] | [0] 2 | ynfQ | cold‑shock protein |
* | * | ÷ | NZ_CP009273 | 1633005 | 1633083 | 79 | 2 [0] | [0] 4 | cspI/rzpQ | cold shock protein CspI/DUF2514 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1633156 | 1633271 | 116 | 2 [0] | [0] 2 | cspI/rzpQ | cold shock protein CspI/DUF2514 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1635023 | 1635037 | 15 | 2 [1] | [0] 2 | essD/ynfU | phage lysis protein EssD/putative zinc‑binding protein YnfU |
* | * | ÷ | NZ_CP009273 | 1635220 | 1635295 | 76 | 3 [1] | [1] 2 | [ynfU] | [ynfU] |
* | * | ÷ | NZ_CP009273 | 1641094 | 1641112 | 19 | 2 [1] | [1] 2 | flxA/BW25113_RS23105 | FlxA‑like family protein/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1652283 | 1652301 | 19 | 2 [0] | [0] 3 | ynfD/ynfE | DUF1161 domain‑containing protein/dimethyl sulfoxide reductase subunit A |
* | * | ÷ | NZ_CP009273 | 1663849 | 1663887 | 39 | 3 [1] | [0] 3 | [ynfL] | [ynfL] |
* | * | ÷ | NZ_CP009273 | 1699160 | 1699199 | 40 | 6 [0] | [1] 2 | blr/ydgT | division septum protein Blr/transcription modulator YdgT |
* | * | ÷ | NZ_CP009273 | 1715124 | 1715134 | 11 | 3 [0] | [0] 4 | slyA/ydhI | transcriptional regulator SlyA/DUF1656 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1748924 | 1749081 | 158 | 5 [1] | [0] 2 | ydhY/fumD | ferredoxin‑like protein/fumarate hydratase FumD |
* | * | ÷ | NZ_CP009273 | 1749433 | 1749443 | 11 | 3 [0] | [1] 2 | fumD/BW25113_RS26160 | fumarate hydratase FumD/protein YnhH |
* | * | ÷ | NZ_CP009273 | 1749652 | 1749701 | 50 | 2 [1] | [1] 2 | fumD/BW25113_RS26160 | fumarate hydratase FumD/protein YnhH |
* | * | ÷ | NZ_CP009273 | 1751436 | 1751479 | 44 | 2 [1] | [1] 3 | pykF/lpp | pyruvate kinase PykF/murein lipoprotein Lpp |
* | * | ÷ | NZ_CP009273 | 1772957 | 1773041 | 85 | 3 [1] | [0] 2 | ydiP | AraC family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 1783848 | 1783885 | 38 | 2 [1] | [1] 2 | [hemP] | [hemP] |
* | * | ÷ | NZ_CP009273 | 1797627 | 1797637 | 11 | 2 [1] | [0] 2 | espL1 | type III secretion system effector EspL1 |
* | * | ÷ | NZ_CP009273 | 1800462 | 1800566 | 105 | 4 [1] | [1] 2 | ydiY/pfkB | YdiY family protein/6‑phosphofructokinase II |
* | * | ÷ | NZ_CP009273 | 1806963 | 1806970 | 8 | 2 [0] | [0] 2 | BW25113_RS09050 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 1807515 | 1807564 | 50 | 2 [1] | [0] 2 | BW25113_RS09050/cedA | hypothetical protein/cell division activator CedA |
* | * | ÷ | NZ_CP009273 | 1815514 | 1815591 | 78 | 3 [1] | [1] 2 | [chbB] | [chbB] |
* | * | ÷ | NZ_CP009273 | 1820134 | 1820190 | 57 | 2 [0] | [1] 2 | spy/astE | ATP‑independent periplasmic protein‑refolding chaperone Spy/succinylglutamate desuccinylase |
* | * | ÷ | NZ_CP009273 | 1826267 | 1826292 | 26 | 2 [1] | [1] 4 | astC/xthA | succinylornithine/acetylornithine transaminase/exodeoxyribonuclease III |
* | * | ÷ | NZ_CP009273 | 1836608 | 1836610 | 3 | 2 [0] | [0] 2 | ynjH/gdhA | YnjH family protein/NADP‑specific glutamate dehydrogenase |
* | * | ÷ | NZ_CP009273 | 1839034 | 1839146 | 113 | 2 [1] | [1] 2 | [ynjI] | [ynjI] |
* | * | ÷ | NZ_CP009273 | 1860826 | 1860846 | 21 | 2 [1] | [0] 2 | mipA/yeaG | scaffolding protein MipA/protein kinase YeaG |
* | * | ÷ | NZ_CP009273 | 1864804 | 1864872 | 69 | 3 [1] | [1] 2 | cdgI | GGDEF domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 1888067 | 1888123 | 57 | 3 [0] | [1] 2 | yoaB/yoaC | RidA family protein/DUF1889 family protein |
* | * | ÷ | NZ_CP009273 | 1896142 | 1896164 | 23 | 2 [1] | [0] 2 | yoaE/manX | CNNM family cation transport protein YoaE/PTS mannose transporter subunit IIAB |
* | * | ÷ | NZ_CP009273 | 1899577 | 1899683 | 107 | 3 [1] | [1] 3 | yobD/mntP | DUF986 family protein/manganese efflux pump MntP |
* | * | ÷ | NZ_CP009273 | 1902212 | 1902307 | 96 | 2 [1] | [0] 2 | yobF/yebO | DUF2627 domain‑containing protein/YebO family protein |
* | * | ÷ | NZ_CP009273 | 1902343 | 1902420 | 78 | 2 [0] | [1] 3 | yobF/yebO | DUF2627 domain‑containing protein/YebO family protein |
* | * | ÷ | NZ_CP009273 | 1940352 | 1940444 | 93 | 3 [1] | [0] 2 | yobI | yobI |
* | * | ÷ | NZ_CP009273 | 1940501 | 1940520 | 20 | 2 [0] | [1] 3 | [yebB] | [yebB] |
* | * | ÷ | NZ_CP009273 | 1940885 | 1940898 | 14 | 2 [1] | [1] 2 | yebB | YebB family permuted papain‑like enzyme |
* | * | ÷ | NZ_CP009273 | 1952507 | 1952600 | 94 | 2 [0] | [0] 2 | torY/cutC | NapC/NirT family cytochrome c/copper homeostasis protein CutC |
* | * | ÷ | NZ_CP009273 | 1972752 | 1972774 | 23 | 35 [0] | [1] 2 | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
* | * | ÷ | NZ_CP009273 | 1972996 | 1973046 | 51 | 3 [1] | [0] 2 | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
* | * | ÷ | NZ_CP009273 | 1973094 | 1973133 | 40 | 2 [0] | [0] 2 | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
* | * | ÷ | NZ_CP009273 | 1981536 | 1981585 | 50 | 3 [1] | [1] 3 | azuC/yecR | stress response protein AzuC/YecR‑like lipofamily protein |
* | * | ÷ | NZ_CP009273 | 1982055 | 1982144 | 90 | 3 [0] | [1] 3 | yecR/ftnA | YecR‑like lipofamily protein/non‑heme ferritin |
* | * | ÷ | NZ_CP009273 | 1989121 | 1989165 | 45 | 2 [0] | [1] 3 | [BW25113_RS25650] | [BW25113_RS25650] |
* | * | ÷ | NZ_CP009273 | 1990353 | 1990448 | 96 | 2 [1] | [1] 4 | sdiA/yecC | transcriptional regulator SdiA/L‑cystine ABC transporter ATP‑binding protein YecC |
* | * | ÷ | NZ_CP009273 | 2004694 | 2004752 | 59 | 2 [1] | [0] 2 | [BW25113_RS10120] | [BW25113_RS10120] |
* | * | ÷ | NZ_CP009273 | 2005479 | 2005541 | 63 | 2 [0] | [1] 3 | BW25113_RS10120 | DUF5503 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2005764 | 2005780 | 17 | 3 [1] | [0] 2 | BW25113_RS10120 | DUF5503 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2027033 | 2027135 | 103 | 2 [1] | [1] 2 | drpB/ompC | cell division protein DrpB/porin OmpC |
* | * | ÷ | NZ_CP009273 | 2027304 | 2027531 | 228 | 5 [1] | [0] 2 | drpB/ompC | cell division protein DrpB/porin OmpC |
* | * | ÷ | NZ_CP009273 | 2034700 | 2034743 | 44 | 2 [1] | [1] 3 | msrQ/zinT | protein‑methionine‑sulfoxide reductase heme‑binding subunit MsrQ/metal‑binding protein ZinT |
* | * | ÷ | NZ_CP009273 | 2046746 | 2046764 | 19 | 2 [0] | [1] 3 | BW25113_RS10340 | glycosyltransferase family 9 protein |
* | * | ÷ | NZ_CP009273 | 2050159 | 2050287 | 129 | 2 [1] | [0] 2 | amn/yeeN | AMP nucleosidase/YebC/PmpR family DNA‑binding transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 2050992 | 2051153 | 162 | 2 [1] | [1] 2 | [yeeN] | [yeeN] |
* | * | ÷ | NZ_CP009273 | 2061986 | 2062130 | 145 | 2 [1] | [0] 4 | [BW25113_RS24005] | [BW25113_RS24005] |
* | * | ÷ | NZ_CP009273 | 2079069 | 2079150 | 82 | 3 [1] | [1] 2 | yeeE/plaP | thiosulfate utilization transporter TsuA/YeeE/putrescine/proton symporter PlaP |
* | * | ÷ | NZ_CP009273 | 2094944 | 2094978 | 35 | 3 [1] | [1] 2 | wbbL | N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL |
* | * | ÷ | NZ_CP009273 | 2096858 | 2096869 | 12 | 5 [1] | [0] 4 | wbbL | N‑acetylglucosaminyl‑diphospho‑decaprenol L‑rhamnosyltransferase WbbL |
* | * | ÷ | NZ_CP009273 | 2096932 | 2096933 | 2 | 2 [0] | [0] 2 | wbbK | glycosyltransferase family 1 protein |
* | * | ÷ | NZ_CP009273 | 2096974 | 2097009 | 36 | 2 [0] | [0] 2 | wbbK | glycosyltransferase family 1 protein |
* | * | ÷ | NZ_CP009273 | 2097154 | 2097184 | 31 | 2 [0] | [0] 5 | wbbK | glycosyltransferase family 1 protein |
* | * | ÷ | NZ_CP009273 | 2097340 | 2097375 | 36 | 2 [1] | [0] 2 | wbbK | glycosyltransferase family 1 protein |
* | * | ÷ | NZ_CP009273 | 2097426 | 2097616 | 191 | 3 [1] | [0] 2 | wbbK | glycosyltransferase family 1 protein |
* | * | ÷ | NZ_CP009273 | 2099374 | 2099379 | 6 | 2 [0] | [0] 2 | wbbI | beta‑1,6‑galactofuranosyltransferase |
* | * | ÷ | NZ_CP009273 | 2099548 | 2099687 | 140 | 2 [0] | [1] 2 | wzy | O16 family O‑antigen polymerase |
* | * | ÷ | NZ_CP009273 | 2100199 | 2100245 | 47 | 3 [1] | [1] 3 | wzy | O16 family O‑antigen polymerase |
* | * | ÷ | NZ_CP009273 | 2100667 | 2100682 | 16 | 2 [0] | [0] 2 | wzy | O16 family O‑antigen polymerase |
* | * | ÷ | NZ_CP009273 | 2100746 | 2100777 | 32 | 2 [0] | [0] 2 | glf | UDP‑galactopyranose mutase |
* | * | ÷ | NZ_CP009273 | 2102896 | 2102906 | 11 | 2 [0] | [1] 3 | wzx | O16 family O‑antigen flippase |
* | * | ÷ | NZ_CP009273 | 2103233 | 2103249 | 17 | 3 [1] | [0] 7 | rfbC | dTDP‑4‑dehydrorhamnose 3,5‑epimerase |
* | * | ÷ | NZ_CP009273 | 2131184 | 2131237 | 54 | 2 [1] | [0] 3 | wza/yegH | polysaccharide export protein Wza/TerC family protein |
* | * | ÷ | NZ_CP009273 | 2161747 | 2161775 | 29 | 2 [1] | [0] 2 | BW25113_RS10880 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2161811 | 2161889 | 79 | 2 [0] | [1] 2 | BW25113_RS10880/yegS | hypothetical protein/lipid kinase YegS |
* | * | ÷ | NZ_CP009273 | 2170711 | 2170751 | 41 | 3 [1] | [1] 2 | gatY/fbaB | tagatose‑bisphosphate aldolase subunit GatY/class I fructose‑bisphosphate aldolase |
* | * | ÷ | NZ_CP009273 | 2185801 | 2185954 | 154 | 2 [1] | [1] 2 | yehD/yehE | fimbrial protein/YehE family protein |
* | * | ÷ | NZ_CP009273 | 2222525 | 2222563 | 39 | 4 [1] | [0] 2 | [yohP] | [yohP] |
* | * | ÷ | NZ_CP009273 | 2243117 | 2243119 | 3 | 3 [0] | [0] 2 | yeiE/yeiH | DNA‑binding transcriptional regulator YeiE/YeiH family protein |
* | * | ÷ | NZ_CP009273 | 2253071 | 2253129 | 59 | 2 [1] | [1] 2 | psuK/fruA | pseudouridine kinase/PTS fructose transporter subunit IIBC |
* | * | ÷ | NZ_CP009273 | 2297183 | 2297358 | 176 | 2 [1] | [1] 3 | [BW25113_RS25870] | [BW25113_RS25870] |
* | * | ÷ | NZ_CP009273 | 2300374 | 2300381 | 8 | 2 [1] | [0] 2 | mqo/yojI | malate dehydrogenase (quinone)/microcin J25 efflux ABC transporter YojI |
* | * | ÷ | NZ_CP009273 | 2306470 | 2306524 | 55 | 2 [0] | [1] 2 | ompC/rcsD | porin OmpC/phosphotransferase RcsD |
* | * | ÷ | NZ_CP009273 | 2337753 | 2337869 | 117 | 3 [1] | [0] 2 | yfaL/nrdA | AIDA‑I family autotransporter adhesin YfaL/EhaC/ribonucleoside‑diphosphate reductase subunit alpha |
* | * | ÷ | NZ_CP009273 | 2357871 | 2357914 | 44 | 2 [0] | [1] 3 | yfaZ/nudI | YfaZ family protein/nucleoside triphosphatase NudI |
* | * | ÷ | NZ_CP009273 | 2359281 | 2359311 | 31 | 2 [0] | [0] 2 | ais/arnB | lipopolysaccharide core heptose(II)‑phosphate phosphatase Ais/UDP‑4‑amino‑4‑deoxy‑L‑arabinose aminotransferase |
* | * | ÷ | NZ_CP009273 | 2376484 | 2376484 | 1 | 2 [0] | [0] 2 | elaD | deubiquitinase ElaD |
* | * | ÷ | NZ_CP009273 | 2376892 | 2376962 | 71 | 3 [1] | [1] 3 | elaD | deubiquitinase ElaD |
* | * | ÷ | NZ_CP009273 | 2377317 | 2377329 | 13 | 2 [0] | [0] 2 | elaD | deubiquitinase ElaD |
* | * | ÷ | NZ_CP009273 | 2379266 | 2379353 | 88 | 2 [1] | [0] 2 | [yfbL] | [yfbL] |
* | * | ÷ | NZ_CP009273 | 2400573 | 2400645 | 73 | 3 [0] | [0] 2 | lrhA/alaA | transcriptional regulator LrhA/alanine transaminase AlaA |
* | * | ÷ | NZ_CP009273 | 2449291 | 2449518 | 228 | 2 [0] | [1] 3 | yfcV/sixA | fimbrial protein/phosphohistidine phosphatase SixA |
* | * | ÷ | NZ_CP009273 | 2457527 | 2457553 | 27 | 2 [0] | [0] 2 | [BW25113_RS12235] | [BW25113_RS12235] |
* | * | ÷ | NZ_CP009273 | 2457597 | 2457607 | 11 | 2 [0] | [0] 2 | BW25113_RS12235/mlaA | hypothetical protein/phospholipid‑binding lipoprotein MlaA |
* | * | ÷ | NZ_CP009273 | 2457650 | 2457757 | 108 | 2 [0] | [1] 4 | [mlaA] | [mlaA] |
* | * | ÷ | NZ_CP009273 | 2462809 | 2462996 | 188 | 6 [1] | [0] 2 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2463145 | 2463244 | 100 | 3 [1] | [1] 2 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2463575 | 2463787 | 213 | 2 [0] | [1] 2 | BW25113_RS12270 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2467444 | 2467497 | 54 | 2 [1] | [0] 8 | [BW25113_RS12305] | [BW25113_RS12305] |
* | * | ÷ | NZ_CP009273 | 2474235 | 2474266 | 32 | 4 [1] | [0] 2 | emrY | multidrug efflux MFS transporter permease subunit EmrY |
* | * | ÷ | NZ_CP009273 | 2476770 | 2476811 | 42 | 3 [0] | [1] 3 | emrK | multidrug efflux MFS transporter periplasmic adaptor subunit EmrK |
* | * | ÷ | NZ_CP009273 | 2488080 | 2488136 | 57 | 3 [1] | [0] 2 | yfdX/ypdI | YfdX family protein/colanic acid biosynthesis lipoprotein YpdI |
* | * | ÷ | NZ_CP009273 | 2488180 | 2488214 | 35 | 2 [0] | [1] 2 | ypdI | colanic acid biosynthesis lipoprotein YpdI |
* | * | ÷ | NZ_CP009273 | 2569299 | 2569353 | 55 | 2 [0] | [1] 3 | eutS/maeB | ethanolamine utilization microcompartment protein EutS/NADP‑dependent oxaloacetate‑decarboxylating malate dehydrogenase |
* | * | ÷ | NZ_CP009273 | 2571864 | 2571874 | 11 | 9 [0] | [0] 3 | maeB/tal | NADP‑dependent oxaloacetate‑decarboxylating malate dehydrogenase/transaldolase |
* | * | ÷ | NZ_CP009273 | 2576225 | 2576240 | 16 | 3 [0] | [0] 2 | ypfG/nudK | DUF1176 domain‑containing protein/GDP‑mannose pyrophosphatase NudK |
* | * | ÷ | NZ_CP009273 | 2584475 | 2584527 | 53 | 2 [0] | [1] 5 | ypfM/yffB | protein YpfM/ArsC family reductase |
* | * | ÷ | NZ_CP009273 | 2622460 | 2622540 | 81 | 2 [1] | [1] 6 | [BW25113_RS25940] | [BW25113_RS25940] |
* | * | ÷ | NZ_CP009273 | 2622984 | 2623080 | 97 | 2 [1] | [0] 3 | yfgG/yfgH | YfgG family protein/glycine zipper 2TM domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2693343 | 2693417 | 75 | 2 [1] | [0] 2 | yfhL/shoB | 4Fe‑4S dicluster ferredoxin YfhL/type I toxin‑antitoxin system toxin ShoB |
* | * | ÷ | NZ_CP009273 | 2719120 | 2719125 | 6 | 2 [0] | [0] 2 | kgtP/rrf | alpha‑ketoglutarate permease/5S ribosomal RNA |
* | * | ÷ | NZ_CP009273 | 2751087 | 2751125 | 39 | 3 [1] | [0] 2 | BW25113_RS13685 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2753213 | 2753221 | 9 | 3 [1] | [0] 3 | yfjI | YfjI family protein |
* | * | ÷ | NZ_CP009273 | 2753640 | 2753750 | 111 | 2 [1] | [1] 2 | yfjI | YfjI family protein |
* | * | ÷ | NZ_CP009273 | 2766669 | 2766787 | 119 | 3 [1] | [1] 2 | [BW25113_RS13770] | [BW25113_RS13770] |
* | * | ÷ | NZ_CP009273 | 2766935 | 2766980 | 46 | 3 [1] | [0] 2 | BW25113_RS13770 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2767751 | 2767808 | 58 | 2 [0] | [0] 3 | BW25113_RS13770 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2778170 | 2778188 | 19 | 2 [0] | [0] 2 | BW25113_RS25705 | DUF5507 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2778548 | 2778589 | 42 | 2 [0] | [0] 2 | BW25113_RS25705/BW25113_RS13825 | DUF5507 domain‑containing protein/tRNA‑Ile |
* | * | ÷ | NZ_CP009273 | 2779389 | 2779429 | 41 | 2 [0] | [0] 2 | BW25113_RS13825/BW25113_RS26005 | tRNA‑Ile/alpha‑amylase family glycosyl hydrolase |
* | * | ÷ | NZ_CP009273 | 2779831 | 2779959 | 129 | 2 [1] | [1] 2 | BW25113_RS26005 | alpha‑amylase family glycosyl hydrolase |
* | * | ÷ | NZ_CP009273 | 2781999 | 2782017 | 19 | 3 [1] | [0] 2 | [BW25113_RS26005] | [BW25113_RS26005] |
* | * | ÷ | NZ_CP009273 | 2790394 | 2790438 | 45 | 7 [0] | [0] 2 | yqaE/ygaV | YqaE/Pmp3 family membrane protein/metalloregulator ArsR/SmtB family transcription factor |
* | * | ÷ | NZ_CP009273 | 2791917 | 2792041 | 125 | 9 [1] | [1] 2 | stpA/alaE | DNA‑binding protein StpA/L‑alanine exporter AlaE |
* | * | ÷ | NZ_CP009273 | 2792311 | 2792428 | 118 | 2 [1] | [1] 4 | stpA/alaE | DNA‑binding protein StpA/L‑alanine exporter AlaE |
* | * | ÷ | NZ_CP009273 | 2819063 | 2819118 | 56 | 2 [1] | [0] 2 | mltB/srlA | lytic murein transglycosylase B/PTS glucitol/sorbitol transporter subunit IIC |
* | * | ÷ | NZ_CP009273 | 2825734 | 2825761 | 28 | 2 [0] | [1] 2 | norR/norV | nitric oxide reductase transcriptional regulator NorR/anaerobic nitric oxide reductase flavorubredoxin |
* | * | ÷ | NZ_CP009273 | 2877612 | 2877668 | 57 | 2 [1] | [0] 2 | casA/cas3 | type I‑E CRISPR‑associated protein Cse1/CasA/CRISPR‑associated helicase/endonuclease Cas3 |
* | * | ÷ | NZ_CP009273 | 2877704 | 2877803 | 100 | 2 [0] | [1] 2 | casA/cas3 | type I‑E CRISPR‑associated protein Cse1/CasA/CRISPR‑associated helicase/endonuclease Cas3 |
* | * | ÷ | NZ_CP009273 | 2892799 | 2892820 | 22 | 2 [1] | [1] 2 | ygcU/ygcW | FAD‑binding oxidoreductase/SDR family oxidoreductase |
* | * | ÷ | NZ_CP009273 | 2897127 | 2897223 | 97 | 3 [1] | [1] 2 | ygcE/queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
* | * | ÷ | NZ_CP009273 | 2897778 | 2897805 | 28 | 2 [1] | [0] 2 | ygcE/queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
* | * | ÷ | NZ_CP009273 | 2897880 | 2897909 | 30 | 2 [0] | [0] 2 | ygcE/queE | FGGY‑family carbohydrate kinase/7‑carboxy‑7‑deazaguanine synthase QueE |
* | * | ÷ | NZ_CP009273 | 2898909 | 2898985 | 77 | 3 [1] | [1] 2 | [BW25113_RS14445] | [BW25113_RS14445] |
* | * | ÷ | NZ_CP009273 | 2927169 | 2927206 | 38 | 3 [1] | [0] 2 | fucA/fucP | L‑fuculose‑phosphate aldolase/L‑fucose:H+ symporter permease |
* | * | ÷ | NZ_CP009273 | 2975654 | 2975774 | 121 | 4 [1] | [0] 2 | araE/kduD | arabinose‑proton symporter AraE/2‑dehydro‑3‑deoxy‑D‑gluconate 5‑dehydrogenase KduD |
* | * | ÷ | NZ_CP009273 | 2980529 | 2980538 | 10 | 2 [0] | [1] 2 | yqeG/yqeH | amino acid permease/helix‑turn‑helix transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 2981768 | 2981811 | 44 | 4 [0] | [1] 7 | yqeH/yqeI | helix‑turn‑helix transcriptional regulator/transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 2984421 | 2984454 | 34 | 2 [1] | [0] 2 | BW25113_RS14825/ygeG | hypothetical protein/tetratricopeptide repeat protein |
* | * | ÷ | NZ_CP009273 | 2984530 | 2984577 | 48 | 2 [0] | [0] 2 | BW25113_RS14825/ygeG | hypothetical protein/tetratricopeptide repeat protein |
* | * | ÷ | NZ_CP009273 | 2986844 | 2986870 | 27 | 2 [1] | [1] 3 | ygeH/BW25113_RS14840 | HilA family transcriptional regulator YgeH/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2987488 | 2987541 | 54 | 3 [0] | [0] 3 | BW25113_RS14845 | lytic transglycosylase domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 2988485 | 2988651 | 167 | 2 [0] | [1] 3 | BW25113_RS14850/BW25113_RS26010 | response regulator transcription factor/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 2999286 | 2999299 | 14 | 2 [0] | [1] 2 | ygeV/ygeW | sigma‑54‑dependent Fis family transcriptional regulator/knotted carbamoyltransferase YgeW |
* | * | ÷ | NZ_CP009273 | 3072818 | 3072909 | 92 | 2 [0] | [1] 3 | cmtB/tkt | PTS mannitol transporter subunit IIA/transketolase |
* | * | ÷ | NZ_CP009273 | 3081397 | 3081443 | 47 | 2 [0] | [1] 2 | metK/galP | methionine adenosyltransferase/galactose/proton symporter |
* | * | ÷ | NZ_CP009273 | 3106852 | 3106866 | 15 | 2 [1] | [0] 2 | yghG/pppA | type II secretion system pilot lipoprotein GspS‑beta/prepilin peptidase PppA |
* | * | ÷ | NZ_CP009273 | 3112611 | 3112621 | 11 | 3 [1] | [0] 2 | sslE/glcA | lipoprotein metalloprotease SslE/glycolate permease GlcA |
* | * | ÷ | NZ_CP009273 | 3112867 | 3112905 | 39 | 3 [1] | [1] 2 | sslE/glcA | lipoprotein metalloprotease SslE/glycolate permease GlcA |
* | * | ÷ | NZ_CP009273 | 3114660 | 3114683 | 24 | 3 [1] | [1] 2 | glcA/glcB | glycolate permease GlcA/malate synthase G |
* | * | ÷ | NZ_CP009273 | 3176981 | 3177036 | 56 | 2 [1] | [1] 2 | BW25113_RS25885/ribB | hypothetical protein/3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase |
* | * | ÷ | NZ_CP009273 | 3178531 | 3178556 | 26 | 2 [0] | [0] 2 | ubiK/ygiL | ubiquinone biosynthesis accessory factor UbiK/fimbrial‑like protein |
* | * | ÷ | NZ_CP009273 | 3178611 | 3178775 | 165 | 2 [0] | [1] 2 | [ygiL] | [ygiL] |
* | * | ÷ | NZ_CP009273 | 3246074 | 3246188 | 115 | 3 [0] | [1] 4 | yhaH/yhaI | DUF805 domain‑containing protein/DUF805 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 3246627 | 3246683 | 57 | 2 [1] | [0] 3 | [yhaJ] | [yhaJ] |
* | * | ÷ | NZ_CP009273 | 3259493 | 3259509 | 17 | 2 [0] | [1] 2 | tdcA | transcriptional regulator TdcA |
* | * | ÷ | NZ_CP009273 | 3260541 | 3260561 | 21 | 2 [0] | [1] 2 | tdcA/tdcR | transcriptional regulator TdcA/transcriptional activator TdcR |
* | * | ÷ | NZ_CP009273 | 3260754 | 3260768 | 15 | 3 [1] | [0] 2 | tdcR | transcriptional activator TdcR |
* | * | ÷ | NZ_CP009273 | 3261710 | 3261778 | 69 | 3 [1] | [0] 2 | [BW25113_RS16190]–[yhaC] | [BW25113_RS16190],[yhaC] |
* | * | ÷ | NZ_CP009273 | 3262583 | 3262613 | 31 | 2 [1] | [0] 2 | yhaC | YhaC family protein |
* | * | ÷ | NZ_CP009273 | 3262656 | 3262728 | 73 | 2 [0] | [0] 2 | yhaC | YhaC family protein |
* | * | ÷ | NZ_CP009273 | 3354244 | 3354306 | 63 | 2 [0] | [0] 4 | gltD/gltF | glutamate synthase subunit GltD/DUF1120 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 3354386 | 3354427 | 42 | 2 [0] | [1] 2 | gltD/gltF | glutamate synthase subunit GltD/DUF1120 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 3378679 | 3378783 | 105 | 2 [1] | [1] 2 | argR/yhcN | transcriptional regulator ArgR/peroxide/acid stress response protein YhcN |
* | * | ÷ | NZ_CP009273 | 3406981 | 3406998 | 18 | 2 [0] | [0] 2 | acrS/acrE | multidrug efflux transporter transcriptional repressor AcrS/multidrug efflux RND transporter periplasmic adaptor subunit AcrE |
* | * | ÷ | NZ_CP009273 | 3448785 | 3448888 | 104 | 2 [1] | [1] 4 | gspA/gspC | type II secretion system protein GspA/type II secretion system protein GspC |
* | * | ÷ | NZ_CP009273 | 3460432 | 3460448 | 17 | 2 [1] | [1] 2 | bfd/chiA | bacterioferritin‑associated ferredoxin/bifunctional chitinase/lysozyme |
* | * | ÷ | NZ_CP009273 | 3463312 | 3463387 | 76 | 2 [1] | [1] 2 | chiA/tuf | bifunctional chitinase/lysozyme/elongation factor Tu |
* | * | ÷ | NZ_CP009273 | 3575371 | 3575536 | 166 | 2 [0] | [1] 4 | hcp | Hcp1 family type VI secretion system effector |
* | * | ÷ | NZ_CP009273 | 3576436 | 3576517 | 82 | 2 [1] | [1] 3 | BW25113_RS17825 | YrhA family protein |
* | * | ÷ | NZ_CP009273 | 3577857 | 3577868 | 12 | 2 [1] | [0] 2 | BW25113_RS25760 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 3625537 | 3625557 | 21 | 4 [1] | [0] 2 | yhiJ | YhiJ/YhiL family protein |
* | * | ÷ | NZ_CP009273 | 3626524 | 3626560 | 37 | 2 [0] | [1] 4 | BW25113_RS18065 | YhiJ/YhiL family protein |
* | * | ÷ | NZ_CP009273 | 3627484 | 3627559 | 76 | 2 [0] | [1] 4 | BW25113_RS18065 | YhiJ/YhiL family protein |
* | * | ÷ | NZ_CP009273 | 3628487 | 3632454 | 3968 | 39 [0] | [1] 2 | [yhiM]–[pitA] | [yhiM],yhiN,[pitA] |
* | * | ÷ | NZ_CP009273 | 3632540 | 3639035 | 6496 | 2 [1] | [0] 2 | uspB–[rlmJ] | uspB,uspA,BW25113_RS26225,BW25113_RS26230,dtpB,rsmJ,prlC,[rlmJ] |
* | * | ÷ | NZ_CP009273 | 3639096 | 3639856 | 761 | 2 [0] | [0] 2 | [rlmJ]–[gorA] | [rlmJ],[gorA] |
* | * | ÷ | NZ_CP009273 | 3639918 | 3642285 | 2368 | 2 [0] | [1] 3 | [gorA]–arsR | [gorA],dinQ,arsR |
* | * | ÷ | NZ_CP009273 | 3642373 | 3642588 | 216 | 2 [0] | [0] 2 | arsB | arsenite/antimonite:H(+) antiporter ArsB |
* | * | ÷ | NZ_CP009273 | 3642632 | 3646531–3645396 | 2765–3900 | 2 [0] | [1] 3 | [arsB]–BW25113_RS18160 | [arsB],arsC,BW25113_RS18155,BW25113_RS18160 |
* | * | ÷ | NZ_CP009273 | 3648188 | 3648229 | 42 | 2 [0] | [0] 2 | dctR | LuxR C‑terminal‑related transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 3650231 | 3650241 | 11 | 5 [0] | [0] 4 | hdeA/hdeD | acid‑activated periplasmic chaperone HdeA/acid‑resistance protein HdeD |
* | * | ÷ | NZ_CP009273 | 3715553 | 3715609 | 57 | 2 [1] | [1] 3 | BW25113_RS25300/glyS | IS3‑like element IS150 family transposase/glycine‑‑tRNA ligase subunit beta |
* | * | ÷ | NZ_CP009273 | 3721192 | 3721235 | 44 | 2 [1] | [0] 2 | BW25113_RS18495/xylB | inner membrane protein YiaB/xylulokinase |
* | * | ÷ | NZ_CP009273 | 3751267 | 3751371 | 105 | 2 [1] | [1] 2 | yiaY/selB | L‑threonine dehydrogenase/selenocysteine‑specific translation elongation factor |
* | * | ÷ | NZ_CP009273 | 3763005 | 3763031 | 27 | 2 [0] | [0] 2 | BW25113_RS26240 | Imm57 family immunity protein |
* | * | ÷ | NZ_CP009273 | 3763101 | 3763104 | 4 | 2 [0] | [0] 2 | BW25113_RS26240 | Imm57 family immunity protein |
* | * | ÷ | NZ_CP009273 | 3763164 | 3763185 | 22 | 2 [0] | [0] 2 | BW25113_RS26240/yibH | Imm57 family immunity protein/HlyD family secretion protein |
* | * | ÷ | NZ_CP009273 | 3787080 | 3787106 | 27 | 2 [1] | [1] 2 | yibB/rfaD | protein YibB/ADP‑glyceromanno‑heptose 6‑epimerase |
* | * | ÷ | NZ_CP009273 | 3790351 | 3790454 | 104 | 3 [1] | [0] 2 | waaL | O‑antigen ligase |
* | * | ÷ | NZ_CP009273 | 3790504 | 3790536 | 33 | 2 [0] | [0] 2 | waaL | O‑antigen ligase |
* | * | ÷ | NZ_CP009273 | 3791617 | 3791621 | 5 | 2 [0] | [0] 2 | waaU | glycosyltransferase family 9 protein |
* | * | ÷ | NZ_CP009273 | 3791975 | 3791982 | 8 | 2 [1] | [0] 2 | waaU | glycosyltransferase family 9 protein |
* | * | ÷ | NZ_CP009273 | 3792520 | 3792696 | 177 | 2 [0] | [0] 2 | [waaU] | [waaU] |
* | * | ÷ | NZ_CP009273 | 3792783 | 3792784 | 2 | 2 [0] | [0] 2 | waaZ | 3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ |
* | * | ÷ | NZ_CP009273 | 3792820 | 3792866 | 47 | 2 [0] | [1] 5 | waaZ | 3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ |
* | * | ÷ | NZ_CP009273 | 3794217 | 3794256 | 40 | 2 [0] | [1] 3 | rfaY | lipopolysaccharide core heptose(II) kinase RfaY |
* | * | ÷ | NZ_CP009273 | 3794562 | 3794653 | 92 | 2 [0] | [0] 3 | rfaJ | lipopolysaccharide 1,2‑glucosyltransferase RfaJ |
* | * | ÷ | NZ_CP009273 | 3796327 | 3796372 | 46 | 2 [0] | [1] 3 | waaO | lipopolysaccharide 3‑alpha‑galactosyltransferase |
* | * | ÷ | NZ_CP009273 | 3797711 | 3797762 | 52 | 3 [1] | [0] 2 | rfaS | LPS core biosynthesis protein RfaS |
* | * | ÷ | NZ_CP009273 | 3797821 | 3797863 | 43 | 2 [0] | [1] 2 | rfaS | LPS core biosynthesis protein RfaS |
* | * | ÷ | NZ_CP009273 | 3798120 | 3798134 | 15 | 2 [0] | [1] 3 | rfaS | LPS core biosynthesis protein RfaS |
* | * | ÷ | NZ_CP009273 | 3798224 | 3798254 | 31 | 2 [1] | [0] 2 | rfaS | LPS core biosynthesis protein RfaS |
* | * | ÷ | NZ_CP009273 | 3798327 | 3798497 | 171 | 2 [0] | [1] 2 | [rfaS] | [rfaS] |
* | * | ÷ | NZ_CP009273 | 3830063 | 3830128 | 66 | 2 [1] | [1] 3 | BW25113_RS26245/setC | virulence RhuM family protein/sugar efflux transporter |
* | * | ÷ | NZ_CP009273 | 3837251 | 3837320 | 70 | 2 [1] | [1] 2 | adeQ/adeD | adenine permease AdeQ/adenine deaminase |
* | * | ÷ | NZ_CP009273 | 3943505 | 3943548 | 44 | 2 [0] | [1] 2 | yifB/ilvL | YifB family Mg chelatase‑like AAA ATPase/ilv operon leader peptide |
* | * | ÷ | NZ_CP009273 | 3996487 | 3996499 | 13 | 3 [1] | [1] 3 | BW25113_RS19825 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 4037398 | 4037473 | 76 | 2 [1] | [1] 2 | [dsbA] | [dsbA] |
* | * | ÷ | NZ_CP009273 | 4062728 | 4062777 | 50 | 2 [1] | [0] 2 | yihQ/yihR | sulfoquinovosidase/aldose‑1‑epimerase |
* | * | ÷ | NZ_CP009273 | 4080233 | 4080242 | 10 | 2 [1] | [1] 2 | fdhD/yiiG | formate dehydrogenase accessory sulfurtransferase FdhD/YiiG family protein |
* | * | ÷ | NZ_CP009273 | 4086311 | 4086322 | 12 | 4 [0] | [1] 2 | frvA/rhaM | PTS fructose transporter subunit IIA/L‑rhamnose mutarotase |
* | * | ÷ | NZ_CP009273 | 4102690 | 4102720 | 31 | 2 [1] | [1] 2 | yiiR/yiiS | DUF805 domain‑containing protein/DUF406 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 4205241 | 4205259 | 19 | 3 [1] | [0] 3 | metA/aceB | homoserine O‑succinyltransferase/malate synthase A |
* | * | ÷ | NZ_CP009273 | 4212433 | 4212514 | 82 | 2 [1] | [1] 2 | espL4/iclR | type III secretion system effector EspL4/glyoxylate bypass operon transcriptional repressor IclR |
* | * | ÷ | NZ_CP009273 | 4225500 | 4225530 | 31 | 2 [1] | [1] 2 | pgi/yjbE | glucose‑6‑phosphate isomerase/exopolysaccharide production protein YjbE |
* | * | ÷ | NZ_CP009273 | 4225623 | 4225767 | 145 | 2 [0] | [0] 2 | pgi/yjbE | glucose‑6‑phosphate isomerase/exopolysaccharide production protein YjbE |
* | * | ÷ | NZ_CP009273 | 4240749 | 4240866 | 118 | 2 [0] | [1] 3 | BW25113_RS20970 | SopA family protein |
* | * | ÷ | NZ_CP009273 | 4241401 | 4241459 | 59 | 2 [1] | [0] 4 | BW25113_RS20970 | SopA family protein |
* | * | ÷ | NZ_CP009273 | 4241548 | 4241622 | 75 | 2 [0] | [1] 3 | BW25113_RS20970 | SopA family protein |
* | * | ÷ | NZ_CP009273 | 4250368 | 4250380 | 13 | 2 [1] | [0] 2 | BW25113_RS21020 | DUF2713 domain‑containing protein |
* | * | ÷ | NZ_CP009273 | 4251277 | 4251317 | 41 | 2 [0] | [1] 5 | BW25113_RS21020/dusA | DUF2713 domain‑containing protein/tRNA dihydrouridine(20/20a) synthase DusA |
* | * | ÷ | NZ_CP009273 | 4258823 | 4258835 | 13 | 3 [1] | [0] 2 | BW25113_RS26020 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 4271646 | 4271679 | 34 | 2 [0] | [1] 2 | yjcE/espX5 | Na+/H+ antiporter/T3SS effector pentapeptide repeat protein EspX5 |
* | * | ÷ | NZ_CP009273 | 4272422 | 4272458 | 37 | 2 [1] | [1] 3 | espX5 | T3SS effector pentapeptide repeat protein EspX5 |
* | * | ÷ | NZ_CP009273 | 4272621 | 4272658 | 38 | 3 [1] | [0] 2 | espX5 | T3SS effector pentapeptide repeat protein EspX5 |
* | * | ÷ | NZ_CP009273 | 4272714 | 4272784 | 71 | 2 [0] | [1] 2 | espX5 | T3SS effector pentapeptide repeat protein EspX5 |
* | * | ÷ | NZ_CP009273 | 4272989 | 4273103 | 115 | 2 [0] | [0] 2 | [espX5] | [espX5] |
* | * | ÷ | NZ_CP009273 | 4294342 | 4294393 | 52 | 7 [0] | [1] 2 | ytcA/yjcS | YtcA family lipoprotein/alkyl sulfatase YjcS |
* | * | ÷ | NZ_CP009273 | 4296619 | 4296633 | 15 | 2 [1] | [1] 3 | yjcS/alsK | alkyl sulfatase YjcS/allose kinase |
* | * | ÷ | NZ_CP009273 | 4302868 | 4302934 | 67 | 2 [1] | [1] 2 | alsR/rpiB | als operon DNA‑binding transcriptional repressor AlsR/bifunctional allose‑6‑phosphate isomerase/ribose‑5‑phosphate isomerase RpiB |
* | * | ÷ | NZ_CP009273 | 4316722 | 4316787 | 66 | 2 [0] | [0] 2 | yjdM/crfC | zinc ribbon domain‑containing protein YjdM/clamp‑binding protein CrfC |
* | * | ÷ | NZ_CP009273 | 4327830 | 4327904 | 75 | 2 [0] | [1] 2 | adiY/adiA | DNA‑binding transcriptional activator AdiY/arginine decarboxylase |
* | * | ÷ | NZ_CP009273 | 4342756 | 4342766 | 11 | 2 [0] | [0] 2 | ghoT | type V toxin‑antitoxin system toxin GhoT |
* | * | ÷ | NZ_CP009273 | 4350032 | 4350120 | 89 | 4 [1] | [1] 2 | cadB/cadC | cadaverine/lysine antiporter/lysine decarboxylation/transport transcriptional activator CadC |
* | * | ÷ | NZ_CP009273 | 4364060 | 4364213 | 154 | 3 [1] | [1] 3 | yjeJ/epmB | YjeJ family protein/EF‑P beta‑lysylation protein EpmB |
* | * | ÷ | NZ_CP009273 | 4409595 | 4409605 | 11 | 6 [0] | [0] 2 | ulaG/ulaA | L‑ascorbate 6‑phosphate lactonase/PTS ascorbate transporter subunit IIC |
* | * | ÷ | NZ_CP009273 | 4417252 | 4417269 | 18 | 2 [1] | [1] 2 | yjfZ/BW25113_RS21850 | DUF2686 family protein/TetR/AcrR family transcriptional regulator |
* | * | ÷ | NZ_CP009273 | 4427375 | 4427405 | 31 | 3 [1] | [0] 2 | cysQ/BW25113_RS21900 | 3'(2'),5'‑bisphosphate nucleotidase CysQ/hypothetical protein |
* | * | ÷ | NZ_CP009273 | 4466642 | 4466897 | 256 | 2 [0] | [0] 2 | BW25113_RS22080 | hypothetical protein |
* | * | ÷ | NZ_CP009273 | 4487783 | 4487856 | 74 | 2 [0] | [1] 2 | BW25113_RS22170/BW25113_RS22180 | tyrosine‑type recombinase/integrase/IS3‑like element IS2 family transposase |
* | * | ÷ | NZ_CP009273 | 4493718 | 4493759 | 42 | 2 [1] | [0] 2 | insG/nanX | IS4‑like element IS4 family transposase/MFS transporter |
* | * | ÷ | NZ_CP009273 | 4494801 | 4494850 | 50 | 2 [0] | [0] 2 | nanX | MFS transporter |
* | * | ÷ | NZ_CP009273 | 4529466 | 4529532 | 67 | 2 [0] | [1] 2 | nanC/fimB | N‑acetylneuraminic acid outer membrane channel NanC/type 1 fimbria switch DNA invertase FimB |
* | * | ÷ | NZ_CP009273 | 4531438 | 4531532 | 95 | 3 [1] | [1] 4 | fimB/fimE | type 1 fimbria switch DNA invertase FimB/type 1 fimbria switch DNA invertase FimE |
* | * | ÷ | NZ_CP009273 | 4532453 | 4532498 | 46 | 2 [1] | [0] 14 | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
* | * | ÷ | NZ_CP009273 | 4532531 | 4532617 | 87 | 2 [1] | [0] 2 | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
* | * | ÷ | NZ_CP009273 | 4546339 | 4546425 | 87 | 2 [0] | [1] 2 | yjiC/idlP | YjfZ/YjiC family protein/iraD leader peptide IdlP |
* | * | ÷ | NZ_CP009273 | 4562031 | 4562116 | 86 | 2 [1] | [1] 2 | yjiS/yjiT | DUF1127 domain‑containing protein/protein YjiT |
* | * | ÷ | NZ_CP009273 | 4592979 | 4593041 | 63 | 3 [1] | [1] 2 | yjjP/yjjQ | threonine/serine exporter ThrE family protein/response regulator transcription factor |
* | * | ÷ | NZ_CP009273 | 4611532 | 4611568 | 37 | 2 [1] | [1] 2 | deoD/yjjJ | purine‑nucleoside phosphorylase/type II toxin‑antitoxin system HipA family toxin YjjJ |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NZ_CP009273 | 360104 = | NA (NA) | 36 (1.570) | 22/164 | 0.1 | NA | intergenic (‑35/+251) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein |
? | NZ_CP009273 | = 360286 | NA (NA) | intergenic (‑217/+69) | lacZ/BW25113_RS23320 | beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein | |||||
* | ? | NZ_CP009273 | 1203246 = | 9 (0.390) | 5 (0.270) | 4/132 | 1.3 | 35.4% | coding (290/630 nt) | BW25113_RS05990 | hypothetical protein |
? | NZ_CP009273 | 1205075 = | 11 (0.600) | coding (40/540 nt) | BW25113_RS06005 | phage tail protein | |||||
* | ? | NZ_CP009273 | = 1972751 | 0 (0.000) | 35 (1.520) | 17/164 | 0.3 | 100% | intergenic (‑297/‑483) | flhD/uspC | flagellar transcriptional regulator FlhD/universal stress protein UspC |
? | NZ_CP009273 | = 2283592 | NA (NA) | intergenic (‑68/‑387) | BW25113_RS11435/narP | IS5‑like element IS5 family transposase/nitrate/nitrite response regulator protein NarP | |||||
* | ? | NZ_CP009273 | 2282398 = | NA (NA) | 39 (1.700) | 12/164 | 0.5 | 100% | pseudogene (3/2532 nt) | yejO | autotransporter YejO |
? | NZ_CP009273 | = 3628486 | 0 (0.000) | coding (286/1053 nt) | yhiM | DUF2776 domain‑containing protein | |||||
* | ? | NZ_CP009273 | 4532499 = | 0 (0.000) | 12 (0.590) | 8/146 | 0.8 | 68.6% | intergenic (+49/‑433) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
? | NZ_CP009273 | 4532813 = | 11 (0.540) | intergenic (+363/‑119) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |