breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutations
evidence position mutation annotation gene description
RA 49,791 G→A intergenic (+160/‑32) kefC → / → folA glutathione‑regulated potassium‑efflux system protein KefC/type 3 dihydrofolate reductase
RA 49,910 T→G W30G (TGG→GGG)  folA → type 3 dihydrofolate reductase
MC JC 2,399,465 Δ7 bp coding (650‑656/939 nt) lrhA ← transcriptional regulator LrhA
MC JC 3,390,478 Δ45 bp coding (633‑677/1470 nt) rng ← ribonuclease G
RA 3,631,618 Δ1 bp coding (617/1500 nt) pitA → inorganic phosphate transporter PitA

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 17150 17178 29 2 [1] [1] 2 mokC/nhaA type I toxin‑antitoxin system toxin MokC/Na+/H+ antiporter NhaA
* * ÷ NZ_CP009273 80540 80574 35 2 [1] [1] 2 leuL/leuO leu operon leader peptide/transcriptional regulator LeuO
* * ÷ NZ_CP009273 130637 130658 22 3 [1] [0] 3 acnB bifunctional aconitate hydratase 2/2‑methylisocitrate dehydratase
* * ÷ NZ_CP009273 234942 235204 263 2 [1] [1] 2 BW25113_RS01095 hypothetical protein
* * ÷ NZ_CP009273 247542 247565 24 3 [1] [0] 2 dinB DNA polymerase IV
* * ÷ NZ_CP009273 255309 255355 47 2 [1] [1] 2 phoE phosphoporin PhoE
* * ÷ NZ_CP009273 295816 295819 4 2 [1] [0] 4 paoC aldehyde oxidoreductase molybdenum‑binding subunit PaoC
* * ÷ NZ_CP009273 356967 357569 603 2 [1] [1] 2 lacA galactoside O‑acetyltransferase
* * ÷ NZ_CP009273 383771 383846 76 2 [1] [1] 3 tauD taurine dioxygenase
* * ÷ NZ_CP009273 385397 385407 11 2 [0] [0] 2 hemB/BW25113_RS01915 porphobilinogen synthase/outer membrane autotransporter barrel domain‑containing protein
* * ÷ NZ_CP009273 391566 391637 72 2 [1] [1] 6 ampH D‑alanyl‑D‑alanine‑ carboxypeptidase/endopeptidase AmpH
* * ÷ NZ_CP009273 396590 396664 75 2 [1] [1] 2 [BW25113_RS25915] [BW25113_RS25915]
* * ÷ NZ_CP009273 396782 396792 11 2 [0] [0] 2 BW25113_RS25915/iraP hypothetical protein/anti‑adapter protein IraP
* * ÷ NZ_CP009273 404561 404609 49 2 [1] [0] 2 [rdgC] [rdgC]
* * ÷ NZ_CP009273 415307 415345 39 3 [1] [1] 2 brnQ branched‑chain amino acid transporter carrier protein BrnQ
* * ÷ NZ_CP009273 417169 417212 44 2 [1] [0] 3 proY proline‑specific permease ProY
* * ÷ NZ_CP009273 421097 421136 40 3 [1] [1] 2 queA tRNA preQ1(34) S‑adenosylmethionine ribosyltransferase‑isomerase QueA
* * ÷ NZ_CP009273 428486 428556 71 2 [1] [1] 4 nrdR transcriptional regulator NrdR
* * ÷ NZ_CP009273 431958 431972 15 2 [1] [1] 2 thiL thiamine‑phosphate kinase
* * ÷ NZ_CP009273 434189 434223 35 2 [0] [1] 3 dxs 1‑deoxy‑D‑xylulose‑5‑phosphate synthase
* * ÷ NZ_CP009273 438940 438969 30 3 [1] [0] 4 yajL protein deglycase YajL
* * ÷ NZ_CP009273 442711 442785 75 3 [1] [1] 3 cyoE heme o synthase
* * ÷ NZ_CP009273 443933 443977 45 2 [1] [1] 2 cyoC cytochrome o ubiquinol oxidase subunit III
* * ÷ NZ_CP009273 463236 463244 9 2 [0] [1] 2 cof HMP‑PP phosphatase
* * ÷ NZ_CP009273 466130 466151 22 2 [0] [1] 2 mdlB SmdB family multidrug efflux ABC transporter permease/ATP‑binding protein
* * ÷ NZ_CP009273 477159 477183 25 2 [1] [1] 2 acrB efflux RND transporter permease AcrB
* * ÷ NZ_CP009273 501788 501817 30 2 [1] [1] 2 ushA bifunctional UDP‑sugar hydrolase/5'‑nucleotidase
* * ÷ NZ_CP009273 505839 505908 70 2 [1] [1] 5 copA copper‑exporting P‑type ATPase CopA
* * ÷ NZ_CP009273 508073 508137 65 2 [1] [1] 2 ybaT APC family permease
* * ÷ NZ_CP009273 514600 514630 31 2 [1] [1] 2 tesA multifunctional acyl‑CoA thioesterase I/protease I/lysophospholipase L1
* * ÷ NZ_CP009273 518436 518499 64 2 [1] [1] 2 ybbP/rhsD ABC transporter permease/rhs element protein RhsD
* * ÷ NZ_CP009273 519240 519280 41 2 [1] [1] 2 rhsD rhs element protein RhsD
* * ÷ NZ_CP009273 519911 519954 44 3 [1] [1] 3 rhsD rhs element protein RhsD
* * ÷ NZ_CP009273 524166 524188 23 3 [1] [1] 2 BW25113_RS24960 hypothetical protein
* * ÷ NZ_CP009273 525569 525592 24 2 [1] [1] 2 [mnmH] [mnmH]
* * ÷ NZ_CP009273 528894 528905 12 2 [1] [1] 5 allR HTH‑type transcriptional repressor AllR
* * ÷ NZ_CP009273 531066 531068 3 2 [0] [1] 2 gcl glyoxylate carboligase
* * ÷ NZ_CP009273 533594 533639 46 2 [1] [1] 2 ybbW putative allantoin permease
* * ÷ NZ_CP009273 534552 534581 30 4 [1] [1] 2 ybbW/allB putative allantoin permease/allantoinase AllB
* * ÷ NZ_CP009273 537860 537885 26 2 [0] [0] 4 glxK glycerate 3‑kinase
* * ÷ NZ_CP009273 541941 542044 104 4 [1] [1] 2 allD/fdrA ureidoglycolate dehydrogenase/acyl‑CoA synthetase FdrA
* * ÷ NZ_CP009273 545275 545283 9 2 [1] [0] 2 ylbF DUF2877 domain‑containing protein
* * ÷ NZ_CP009273 545341 545380 40 2 [0] [1] 3 ylbF DUF2877 domain‑containing protein
* * ÷ NZ_CP009273 553533 553540 8 2 [1] [1] 2 folD/fimA bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD/type 1 fimbrial major subunit FimA
* * ÷ NZ_CP009273 559290 559300 11 2 [0] [0] 2 sfmF fimbria assembly protein
* * ÷ NZ_CP009273 559391 559420 30 2 [0] [0] 2 fimZ fimbria biosynthesis transcriptional regulator FimZ
* * ÷ NZ_CP009273 565368 565466 99 2 [1] [1] 2 ybcK recombinase family protein
* * ÷ NZ_CP009273 569452 569466 15 2 [1] [0] 2 quuD antitermination protein QuuD
* * ÷ NZ_CP009273 569757 569803 47 2 [0] [1] 2 [quuD] [quuD]
* * ÷ NZ_CP009273 574425 574456 32 2 [1] [0] 2 bor/ybcV serum resistance lipoprotein Bor/DUF1398 domain‑containing protein
* * ÷ NZ_CP009273 578597 578652 56 2 [1] [1] 3 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 578741 578876 136 2 [1] [1] 2 BW25113_RS26085/appY tail fiber assembly protein/DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 579483 579588 106 2 [1] [1] 3 appY DNA‑binding transcriptional activator AppY
* * ÷ NZ_CP009273 587713 587747 35 2 [1] [1] 2 nrfB cyclic di‑3',5'‑guanylate‑activated glycosyltransferase NrfB
* * ÷ NZ_CP009273 595922 595959 38 2 [1] [0] 2 cusA Cu(+)/Ag(+) efflux RND transporter permease subunit CusA
* * ÷ NZ_CP009273 596110 596135 26 2 [1] [1] 3 cusA Cu(+)/Ag(+) efflux RND transporter permease subunit CusA
* * ÷ NZ_CP009273 598044 598044 1 2 [0] [0] 2 pheP phenylalanine transporter
* * ÷ NZ_CP009273 624383 624438 56 2 [1] [1] 2 entA 2,3‑dihydro‑2,3‑dihydroxybenzoate dehydrogenase EntA
* * ÷ NZ_CP009273 627625 627716 92 3 [1] [1] 3 [ybdD] [ybdD]
* * ÷ NZ_CP009273 628813 628818 6 2 [0] [1] 2 hcxA hydroxycarboxylate dehydrogenase HcxA
* * ÷ NZ_CP009273 630813 630831 19 2 [1] [1] 2 ybdM
ybdN		 ParB/RepB/Spo0J family partition protein
phosphoadenosine phosphosulfate reductase
* * ÷ NZ_CP009273 631941 631981 41 2 [1] [0] 2 ybdN phosphoadenosine phosphosulfate reductase
* * ÷ NZ_CP009273 632156 632196 41 2 [0] [1] 2 [ybdO] [ybdO]
* * ÷ NZ_CP009273 635246 635276 31 2 [1] [1] 2 ahpF alkyl hydroperoxide reductase subunit F
* * ÷ NZ_CP009273 647163 647200 38 3 [1] [0] 2 citC [citrate (pro‑3S)‑lyase] ligase
* * ÷ NZ_CP009273 651874 651950 77 3 [1] [1] 2 dcuC/pagP anaerobic C4‑dicarboxylate transporter DcuC/lipid IV(A) palmitoyltransferase PagP
* * ÷ NZ_CP009273 656066 656098 33 2 [1] [1] 3 ybeF YbeF family transcriptional regulator
* * ÷ NZ_CP009273 658421 658456 36 2 [1] [0] 4 dacA D‑alanyl‑D‑alanine carboxypeptidase DacA
* * ÷ NZ_CP009273 662103 662111 9 3 [0] [0] 2 mrdA peptidoglycan DD‑transpeptidase MrdA
* * ÷ NZ_CP009273 674247 674282 36 2 [0] [1] 2 djlB J domain‑containing protein
* * ÷ NZ_CP009273 680046 680090 45 3 [1] [1] 2 gltL glutamate/aspartate ABC transporter ATP‑binding protein GltL
* * ÷ NZ_CP009273 685011 685014 4 2 [0] [1] 2 lnt apolipoprotein N‑acyltransferase
* * ÷ NZ_CP009273 690872 690890 19 3 [1] [1] 2 ubiF 3‑demethoxyubiquinol 3‑hydroxylase
* * ÷ NZ_CP009273 697635 697712 78 2 [1] [1] 3 nagA N‑acetylglucosamine‑6‑phosphate deacetylase
* * ÷ NZ_CP009273 698061 698079 19 2 [0] [1] 2 nagA N‑acetylglucosamine‑6‑phosphate deacetylase
* * ÷ NZ_CP009273 716401 716533 133 2 [1] [1] 2 [kdpE] [kdpE]
* * ÷ NZ_CP009273 717594 717676 83 2 [1] [1] 2 kdpD two‑component system sensor histidine kinase KdpD
* * ÷ NZ_CP009273 719208 719273 66 3 [1] [1] 2 kdpD two‑component system sensor histidine kinase KdpD
* * ÷ NZ_CP009273 719364 719430 67 2 [1] [1] 2 kdpD two‑component system sensor histidine kinase KdpD
* * ÷ NZ_CP009273 723951 724075 125 2 [1] [1] 2 kdpA potassium‑transporting ATPase subunit KdpA
* * ÷ NZ_CP009273 724200 724241 42 2 [1] [0] 4 kdpF K(+)‑transporting ATPase subunit F
* * ÷ NZ_CP009273 724459 724512 54 2 [1] [1] 2 kdpF/ybfA K(+)‑transporting ATPase subunit F/YbfA family protein
* * ÷ NZ_CP009273 724617 724648 32 2 [1] [0] 2 ybfA YbfA family protein
* * ÷ NZ_CP009273 726243 726280–726256 14–38 2 [0] [1] 3 rhsC rhs element protein RhsC
* * ÷ NZ_CP009273 728115–728346 728346 1–232 2 [1] [1] 2 rhsC rhs element protein RhsC
* * ÷ NZ_CP009273 729528 729576 49 2 [1] [1] 2 [BW25113_RS03630] [BW25113_RS03630]
* * ÷ NZ_CP009273 732121 732149 29 2 [1] [0] 2 [ybfQ] [ybfQ]
* * ÷ NZ_CP009273 734121–734152 734196 45–76 2 [1] [1] 3 ybfD ISAs1 family transposase
* * ÷ NZ_CP009273 747332 747419 88 2 [1] [1] 2 ybgQ fimbrial biogenesis outer membrane usher protein
* * ÷ NZ_CP009273 748331 748431 101 2 [0] [1] 2 ybgD/gltA fimbrial protein/citrate synthase
* * ÷ NZ_CP009273 764139 764177 39 2 [0] [1] 2 mngB mannosylglycerate hydrolase
* * ÷ NZ_CP009273 772091 772122 32 2 [1] [0] 2 tolA cell envelope integrity protein TolA
* * ÷ NZ_CP009273 772534 772593 60 2 [1] [1] 2 tolA cell envelope integrity protein TolA
* * ÷ NZ_CP009273 780402 780454 53 2 [1] [1] 2 ybgS YbgS‑like family protein
* * ÷ NZ_CP009273 790976 791118 143 2 [1] [1] 3 modA molybdate ABC transporter substrate‑binding protein
* * ÷ NZ_CP009273 792290 792321 32 2 [1] [1] 2 modC molybdenum ABC transporter ATP‑binding protein ModC
* * ÷ NZ_CP009273 800537 800632 96 2 [1] [0] 2 ybhJ hydratase
* * ÷ NZ_CP009273 803007 803036 30 2 [1] [1] 2 ybhB kinase inhibitor
* * ÷ NZ_CP009273 805509 805513 5 2 [1] [0] 2 bioB biotin synthase BioB
* * ÷ NZ_CP009273 806757 806788 32 3 [1] [0] 2 bioF 8‑amino‑7‑oxononanoate synthase
* * ÷ NZ_CP009273 815878 815895 18 2 [1] [1] 2 ybhL Bax inhibitor‑1/YccA family protein
* * ÷ NZ_CP009273 818293 818355 63 3 [1] [1] 2 clsB cardiolipin synthase ClsB
* * ÷ NZ_CP009273 819311 819348 38 2 [0] [1] 2 ybhP endonuclease/exonuclease/phosphatase family protein
* * ÷ NZ_CP009273 826565 826575 11 3 [0] [0] 3 rhlE ATP‑dependent RNA helicase RhlE
* * ÷ NZ_CP009273 827575 827696 122 2 [1] [1] 3 [rhlE] [rhlE]
* * ÷ NZ_CP009273 832390 832451 62 3 [0] [1] 3 hcxB hydroxycarboxylate dehydrogenase HcXB
* * ÷ NZ_CP009273 835215 835260 46 5 [1] [1] 5 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 835421 835429 9 2 [0] [1] 3 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 836516 836531 16 2 [1] [0] 2 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 836578 836616 39 2 [0] [1] 2 fiu catecholate siderophore receptor Fiu
* * ÷ NZ_CP009273 838378 838454 77 2 [1] [0] 2 rlmF 23S rRNA (adenine(1618)‑N(6))‑methyltransferase RlmF
* * ÷ NZ_CP009273 838722 838735 14 2 [0] [0] 2 ybiO mechanosensitive channel protein
* * ÷ NZ_CP009273 838779 838785 7 2 [0] [0] 2 ybiO mechanosensitive channel protein
* * ÷ NZ_CP009273 839111 839153 43 2 [1] [1] 2 ybiO mechanosensitive channel protein
* * ÷ NZ_CP009273 840333 840363 31 2 [1] [1] 3 ybiO mechanosensitive channel protein
* * ÷ NZ_CP009273 841490 841535 46 3 [1] [1] 2 glnQ glutamine ABC transporter ATP‑binding protein GlnQ
* * ÷ NZ_CP009273 843750 843773 24 2 [1] [1] 2 glnH/dps glutamine ABC transporter substrate‑binding protein GlnH/DNA starvation/stationary phase protection protein Dps
* * ÷ NZ_CP009273 845033 845109 77 2 [1] [1] 2 rhtA threonine/homoserine exporter RhtA
* * ÷ NZ_CP009273 845707 845745 39 2 [1] [1] 2 rhtA/BW25113_RS25505 threonine/homoserine exporter RhtA/protein YliM
* * ÷ NZ_CP009273 846755 846778 24 2 [1] [0] 3 opgE phosphoethanolamine transferase
* * ÷ NZ_CP009273 853378 853388 11 2 [0] [0] 2 ybiU DUF1479 domain‑containing protein
* * ÷ NZ_CP009273 858205 858243 39 2 [0] [1] 2 ybiY glycyl‑radical enzyme activating protein
* * ÷ NZ_CP009273 864387 864397 11 2 [0] [0] 2 gsiA glutathione ABC transporter ATP‑binding protein GsiA
* * ÷ NZ_CP009273 873002 873023 22 3 [1] [0] 2 rimO 30S ribosomal protein S12 methylthiotransferase RimO
* * ÷ NZ_CP009273 878419 878429 11 4 [1] [1] 2 ybjG undecaprenyl‑diphosphate phosphatase
* * ÷ NZ_CP009273 881421 881430 10 2 [1] [1] 2 ybjI 5‑amino‑6‑(5‑phospho‑D‑ribitylamino)uracil phosphatase
* * ÷ NZ_CP009273 888575 888596 22 2 [1] [1] 2 ybjN YbjN domain‑containing protein
* * ÷ NZ_CP009273 892478 892548 71 3 [1] [1] 2 [potH]–[potI] [potH],[potI]
* * ÷ NZ_CP009273 892721 892773 53 2 [1] [1] 2 potI putrescine ABC transporter permease PotI
* * ÷ NZ_CP009273 896083 896170 88 2 [1] [1] 2 artJ/artM ABC transporter substrate‑binding protein ArtJ/arginine ABC transporter permease ArtM
* * ÷ NZ_CP009273 900206 900298 93 2 [1] [1] 3 ybjQ heavy metal‑binding domain‑containing protein
* * ÷ NZ_CP009273 900514 900522 9 3 [0] [1] 2 amiD N‑acetylmuramoyl‑L‑alanine amidase AmiD
* * ÷ NZ_CP009273 902993 903140 148 4 [1] [1] 3 ybjT SDR family oxidoreductase
* * ÷ NZ_CP009273 905303 905355 53 2 [1] [1] 2 poxB ubiquinone‑dependent pyruvate dehydrogenase
* * ÷ NZ_CP009273 915141 915203 63 2 [1] [1] 2 macA macrolide transporter subunit MacA
* * ÷ NZ_CP009273 929481 929562 82 2 [1] [1] 3 ftsK DNA translocase FtsK
* * ÷ NZ_CP009273 934671 934689 19 2 [0] [1] 2 rarA replication‑associated recombination protein RarA
* * ÷ NZ_CP009273 945454 945462 9 2 [1] [0] 2 ycaK NAD(P)H oxidoreductase
* * ÷ NZ_CP009273 950022 950187 166 2 [1] [1] 2 focA/ycaO formate transporter FocA/30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
* * ÷ NZ_CP009273 955327 955440 114 3 [1] [1] 2 aroA 3‑phosphoshikimate 1‑carboxyvinyltransferase
* * ÷ NZ_CP009273 968651 968768 118 2 [1] [1] 2 elyC envelope biogenesis factor ElyC
* * ÷ NZ_CP009273 968887 968912 26 2 [1] [1] 3 elyC/cmoM envelope biogenesis factor ElyC/tRNA uridine 5‑oxyacetic acid(34) methyltransferase CmoM
* * ÷ NZ_CP009273 969882 969926 45 2 [0] [1] 2 mukF chromosome partition protein MukF
* * ÷ NZ_CP009273 982601 982671 71 2 [0] [0] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 982903 982962 60 3 [0] [1] 2 ompF/asnS porin OmpF/asparagine‑‑tRNA ligase
* * ÷ NZ_CP009273 991832 991862 31 2 [1] [1] 2 ssuA aliphatic sulfonate ABC transporter substrate‑binding protein SsuA
* * ÷ NZ_CP009273 993083 993244 162 2 [1] [1] 2 ssuE/elfA NADPH‑dependent FMN reductase/fimbrial protein
* * ÷ NZ_CP009273 995499 995520 22 2 [0] [1] 2 elfC fimbrial biogenesis usher protein
* * ÷ NZ_CP009273 997227 997228 2 2 [1] [0] 3 elfC fimbrial biogenesis usher protein
* * ÷ NZ_CP009273 1010953 1011053 101 4 [1] [1] 2 pqiC/rmf membrane integrity‑associated transporter subunit PqiC/ribosome modulation factor
* * ÷ NZ_CP009273 1011456 1011504 49 3 [0] [1] 2 fabA bifunctional 3‑hydroxydecanoyl‑ACP dehydratase/trans‑2‑decenoyl‑ACP isomerase
* * ÷ NZ_CP009273 1014280 1014375 96 2 [1] [1] 2 matP macrodomain Ter protein MatP
* * ÷ NZ_CP009273 1016541 1016590 50 2 [1] [1] 2 sulA/sxy cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy
* * ÷ NZ_CP009273 1021077 1021117 41 4 [1] [0] 2 helD DNA helicase IV
* * ÷ NZ_CP009273 1026125 1026139 15 2 [1] [0] 4 tusE/yccA sulfurtransferase TusE/FtsH protease modulator YccA
* * ÷ NZ_CP009273 1028077 1028089 13 3 [0] [0] 2 hyaA hydrogenase 1 small subunit
* * ÷ NZ_CP009273 1031562 1031581 20 2 [0] [1] 3 hyaD hydrogenase 1 maturation protease
* * ÷ NZ_CP009273 1032004 1032021 18 3 [1] [1] 2 hyaE hydrogenase‑1 operon protein HyaE
* * ÷ NZ_CP009273 1032507 1032652 146 2 [1] [1] 2 hyaF hydrogenase expression/formation protein
* * ÷ NZ_CP009273 1046355 1046365 11 2 [0] [1] 2 BW25113_RS05135/cspH IS1‑like element IS1D family transposase/cold shock‑like protein CspH
* * ÷ NZ_CP009273 1058003 1058018 16 3 [1] [1] 3 [cbpM] [cbpM]
* * ÷ NZ_CP009273 1059173 1059202 30 2 [0] [1] 2 cbpA curved DNA‑binding protein
* * ÷ NZ_CP009273 1059293 1059323 31 2 [1] [1] 2 cbpA/yccE curved DNA‑binding protein/YccE family protein
* * ÷ NZ_CP009273 1059990 1060050 61 2 [0] [1] 3 yccE YccE family protein
* * ÷ NZ_CP009273 1060532 1060577 46 2 [1] [1] 2 yccE YccE family protein
* * ÷ NZ_CP009273 1065124 1065182 59 2 [1] [1] 2 rutG pyrimidine utilization transport protein G
* * ÷ NZ_CP009273 1067069 1067106 38 2 [1] [0] 4 rutD pyrimidine utilization protein D
* * ÷ NZ_CP009273 1067373 1067383 11 2 [0] [0] 2 rutC 3‑aminoacrylate deaminase
* * ÷ NZ_CP009273 1073050 1073066 17 2 [1] [1] 2 putA trifunctional transcriptional regulator/proline dehydrogenase/L‑glutamate gamma‑semialdehyde dehydrogenase
* * ÷ NZ_CP009273 1075020 1075066 47 2 [1] [1] 2 putP sodium/proline symporter PutP
* * ÷ NZ_CP009273 1084895 1084945 51 2 [1] [1] 3 pgaB poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase PgaB
* * ÷ NZ_CP009273 1085051 1085061 11 3 [0] [0] 2 pgaB poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase PgaB
* * ÷ NZ_CP009273 1088773 1088822 50 2 [1] [1] 2 dgcT GGDEF domain‑containing protein
* * ÷ NZ_CP009273 1091035 1091105 71 2 [0] [1] 2 BW25113_RS05355 ACP S‑malonyltransferase
* * ÷ NZ_CP009273 1093596 1093650 55 2 [1] [1] 3 ghrA glyoxylate/hydroxypyruvate reductase GhrA
* * ÷ NZ_CP009273 1093943 1093991 49 3 [1] [1] 2 ghrA glyoxylate/hydroxypyruvate reductase GhrA
* * ÷ NZ_CP009273 1098785 1099011 227 2 [1] [1] 2 csgD/csgB biofilm master transcriptional regulator CsgD/curli minor subunit CsgB
* * ÷ NZ_CP009273 1101126 1101169 44 5 [0] [1] 3 ymdA hypothetical protein
* * ÷ NZ_CP009273 1102052 1102140 89 3 [1] [1] 2 clsC cardiolipin synthase ClsC
* * ÷ NZ_CP009273 1103347 1103381 35 2 [1] [1] 2 mdoC glucans biosynthesis protein MdoC
* * ÷ NZ_CP009273 1103889 1103978 90 2 [1] [1] 2 mdoC glucans biosynthesis protein MdoC
* * ÷ NZ_CP009273 1107162 1107212 51 2 [1] [1] 2 mdoH glucans biosynthesis glucosyltransferase MdoH
* * ÷ NZ_CP009273 1112208 1112236 29 4 [1] [1] 2 lpxL/trhO kdo(2)‑lipid IV(A) lauroyltransferase/rhodanese‑related sulfurtransferase
* * ÷ NZ_CP009273 1115808 1115889 82 2 [0] [1] 2 solA N‑methyl‑L‑tryptophan oxidase
* * ÷ NZ_CP009273 1118282 1118333 52 2 [1] [1] 2 yceB lipoprotein
* * ÷ NZ_CP009273 1122514 1122537 24 3 [1] [1] 2 yceM Gfo/Idh/MocA family oxidoreductase
* * ÷ NZ_CP009273 1129767 1129872 106 2 [0] [1] 3 flgF flagellar basal‑body rod protein FlgF
* * ÷ NZ_CP009273 1145779 1145844 66 4 [0] [1] 2 fabD ACP S‑malonyltransferase
* * ÷ NZ_CP009273 1146253 1146331 79 3 [1] [1] 2 fabG 3‑oxoacyl‑ACP reductase FabG
* * ÷ NZ_CP009273 1147079 1147087 9 3 [0] [0] 2 acpP acyl carrier protein
* * ÷ NZ_CP009273 1164353 1164365 13 4 [1] [1] 2 comR/bhsA TetR family copper‑responsive transcriptional repressor ComR/multiple stress resistance protein BhsA
* * ÷ NZ_CP009273 1165588 1165666 79 2 [1] [0] 2 ldtC L,D‑transpeptidase LdtC
* * ÷ NZ_CP009273 1165735 1165854 120 3 [1] [1] 2 [ldtC] [ldtC]
* * ÷ NZ_CP009273 1166234 1166243 10 2 [0] [1] 2 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1168566 1168606 41 3 [0] [1] 3 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1169259 1169283 25 2 [0] [1] 2 mfd transcription‑repair coupling factor
* * ÷ NZ_CP009273 1180200 1180221 22 2 [1] [1] 3 potA spermidine/putrescine ABC transporter ATP‑binding protein PotA
* * ÷ NZ_CP009273 1182232 1182259 28 2 [1] [0] 2 pepT peptidase T
* * ÷ NZ_CP009273 1183130 1183214 85 2 [1] [0] 2 roxA [50S ribosomal protein L16]‑arginine 3‑hydroxylase
* * ÷ NZ_CP009273 1183304 1183319 16 2 [0] [0] 5 roxA [50S ribosomal protein L16]‑arginine 3‑hydroxylase
* * ÷ NZ_CP009273 1187343 1187407 65 2 [1] [1] 2 purB adenylosuccinate lyase
* * ÷ NZ_CP009273 1189185 1189245 61 2 [1] [0] 2 [mnmA] [mnmA]
* * ÷ NZ_CP009273 1191467 1191600 134 3 [1] [1] 2 icd NADP‑dependent isocitrate dehydrogenase
* * ÷ NZ_CP009273 1193084 1193242 159 2 [1] [0] 2 BW25113_RS05920 hypothetical protein
* * ÷ NZ_CP009273 1193290 1193305 16 2 [0] [1] 2 BW25113_RS05920 hypothetical protein
* * ÷ NZ_CP009273 1194104 1194217 114 3 [1] [0] 3 [lit] [lit]
* * ÷ NZ_CP009273 1204666 1204685 20 2 [0] [1] 2 BW25113_RS06005 phage tail protein
* * ÷ NZ_CP009273 1206476 1206703 228 3 [1] [1] 2 [mcrA] [mcrA]
* * ÷ NZ_CP009273 1207270 1207292 23 2 [1] [1] 2 iraM anti‑adapter protein IraM
* * ÷ NZ_CP009273 1207993 1208072 80 2 [1] [0] 2 [BW25113_RS25535] [BW25113_RS25535]
* * ÷ NZ_CP009273 1209566 1209678 113 3 [1] [1] 3 bluR/bluF DNA‑binding transcriptional repressor BluR/blue light‑responsive regulator BluF
* * ÷ NZ_CP009273 1209952 1210019 68 2 [1] [1] 2 bluF blue light‑responsive regulator BluF
* * ÷ NZ_CP009273 1212261 1212313 53 2 [0] [1] 2 BW25113_RS06060 hypothetical protein
* * ÷ NZ_CP009273 1218576 1218618 43 2 [1] [1] 2 BW25113_RS06100 hypothetical protein
* * ÷ NZ_CP009273 1218698 1218722 25 3 [1] [1] 2 [BW25113_RS23645] [BW25113_RS23645]
* * ÷ NZ_CP009273 1221246 1221300 55 2 [1] [1] 2 minC septum site‑determining protein MinC
* * ÷ NZ_CP009273 1222476 1222481 6 2 [0] [1] 3 ycgJ/pliG YcgJ family protein/PPC domain‑containing protein
* * ÷ NZ_CP009273 1225238 1225285 48 2 [1] [1] 3 hlyE hemolysin HlyE
* * ÷ NZ_CP009273 1225958 1226049 92 2 [1] [0] 2 hlyE/umuD hemolysin HlyE/translesion error‑prone DNA polymerase V autoproteolytic subunit
* * ÷ NZ_CP009273 1226157 1226210 54 2 [1] [0] 2 hlyE/umuD hemolysin HlyE/translesion error‑prone DNA polymerase V autoproteolytic subunit
* * ÷ NZ_CP009273 1226274 1226294 21 2 [0] [1] 2 umuD translesion error‑prone DNA polymerase V autoproteolytic subunit
* * ÷ NZ_CP009273 1229283 1229303 21 2 [1] [0] 2 nhaB Na(+)/H(+) antiporter NhaB
* * ÷ NZ_CP009273 1233591 1233733 143 3 [1] [0] 2 dadA D‑amino acid dehydrogenase
* * ÷ NZ_CP009273 1233979 1234041 63 2 [1] [1] 2 dadA D‑amino acid dehydrogenase
* * ÷ NZ_CP009273 1236136 1236139 4 2 [0] [1] 4 cvrA potassium/proton antiporter
* * ÷ NZ_CP009273 1237022 1237286 265 2 [1] [0] 2 cvrA potassium/proton antiporter
* * ÷ NZ_CP009273 1237424 1237467 44 2 [1] [0] 2 cvrA potassium/proton antiporter
* * ÷ NZ_CP009273 1237691 1237790 100 2 [1] [1] 2 ldcA muramoyltetrapeptide carboxypeptidase
* * ÷ NZ_CP009273 1240595 1240653 59 3 [1] [0] 2 [BW25113_RS06225] [BW25113_RS06225]
* * ÷ NZ_CP009273 1246938 1246953 16 2 [0] [0] 2 dhaR dihydroxyacetone kinase operon transcriptional regulator DhaR
* * ÷ NZ_CP009273 1251611 1251762 152 2 [1] [1] 2 ycgV/ychF autotransporter outer membrane beta‑barrel domain‑containing protein/redox‑regulated ATPase YchF
* * ÷ NZ_CP009273 1257257 1257278 22 2 [1] [0] 2 prs ribose‑phosphate diphosphokinase
* * ÷ NZ_CP009273 1263836 1263875 40 3 [1] [1] 2 kdsA 3‑deoxy‑8‑phosphooctulonate synthase
* * ÷ NZ_CP009273 1264120 1264183 64 2 [1] [0] 3 kdsA 3‑deoxy‑8‑phosphooctulonate synthase
* * ÷ NZ_CP009273 1264274 1264337 64 2 [1] [1] 2 kdsA 3‑deoxy‑8‑phosphooctulonate synthase
* * ÷ NZ_CP009273 1264490 1264520 31 2 [1] [1] 2 kdsA/BW25113_RS06330 3‑deoxy‑8‑phosphooctulonate synthase/type I toxin‑antitoxin system toxin Ldr family protein
* * ÷ NZ_CP009273 1268403 1268413 11 2 [0] [0] 4 chaC glutathione‑specific gamma‑glutamylcyclotransferase
* * ÷ NZ_CP009273 1270167 1270233 67 3 [1] [1] 2 ychO inverse autotransporter invasin YchO
* * ÷ NZ_CP009273 1270527 1270613 87 2 [1] [1] 2 ychO inverse autotransporter invasin YchO
* * ÷ NZ_CP009273 1272449 1272517 69 2 [1] [1] 2 narX nitrate/nitrite two‑component system sensor histidine kinase NarX
* * ÷ NZ_CP009273 1272852 1272958 107 2 [1] [1] 5 narX nitrate/nitrite two‑component system sensor histidine kinase NarX
* * ÷ NZ_CP009273 1276987 1276995 9 2 [1] [0] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1277051 1277156 106 2 [0] [1] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1278747 1278812 66 2 [1] [1] 2 narG nitrate reductase subunit alpha
* * ÷ NZ_CP009273 1280318 1280344 27 2 [1] [1] 2 narH nitrate reductase subunit beta
* * ÷ NZ_CP009273 1281659 1281674 16 2 [1] [0] 2 narI respiratory nitrate reductase subunit gamma
* * ÷ NZ_CP009273 1282295 1282372 78 3 [1] [0] 2 [BW25113_RS23085]–[BW25113_RS23090] [BW25113_RS23085],[BW25113_RS23090]
* * ÷ NZ_CP009273 1282470 1282485 16 2 [1] [1] 2 [BW25113_RS23090] [BW25113_RS23090]
* * ÷ NZ_CP009273 1282960 1283062 103 2 [1] [1] 3 [BW25113_RS06420] [BW25113_RS06420]
* * ÷ NZ_CP009273 1287822 1287859 38 2 [0] [1] 2 galU/hns UTP‑‑glucose‑1‑phosphate uridylyltransferase GalU/DNA‑binding transcriptional regulator H‑NS
* * ÷ NZ_CP009273 1288643 1288703 61 2 [0] [1] 3 hns/tdk DNA‑binding transcriptional regulator H‑NS/thymidine kinase
* * ÷ NZ_CP009273 1291539 1291595 57 2 [1] [1] 2 adhE bifunctional acetaldehyde‑CoA/alcohol dehydrogenase
* * ÷ NZ_CP009273 1292253 1292272 20 2 [1] [1] 2 adhE bifunctional acetaldehyde‑CoA/alcohol dehydrogenase
* * ÷ NZ_CP009273 1293204 1293275 72 2 [1] [1] 2 adhE bifunctional acetaldehyde‑CoA/alcohol dehydrogenase
* * ÷ NZ_CP009273 1294613 1294660 48 2 [1] [1] 2 ychE NAAT family transporter YchE
* * ÷ NZ_CP009273 1294877 1294928 52 2 [0] [1] 3 BW25113_RS25865 hypothetical protein
* * ÷ NZ_CP009273 1300599 1300626 28 2 [1] [1] 2 oppF murein tripeptide/oligopeptide ABC transporter ATP‑binding protein OppF
* * ÷ NZ_CP009273 1304065 1304140 76 2 [1] [1] 2 kch voltage‑gated potassium channel protein
* * ÷ NZ_CP009273 1304383 1304433 51 2 [1] [1] 2 kch voltage‑gated potassium channel protein
* * ÷ NZ_CP009273 1305587 1305644 58 2 [0] [1] 2 tonB TonB system transport protein TonB
* * ÷ NZ_CP009273 1306223 1306238 16 3 [1] [1] 2 yciA acyl‑CoA thioester hydrolase YciA
* * ÷ NZ_CP009273 1306770 1306837 68 2 [1] [1] 2 yciB septation protein A
* * ÷ NZ_CP009273 1309448 1309468 21 3 [1] [1] 2 yciE ferritin‑like domain‑containing protein
* * ÷ NZ_CP009273 1309559 1309624 66 2 [1] [1] 2 yciF ferritin‑like domain‑containing protein
* * ÷ NZ_CP009273 1310191 1310340 150 2 [1] [0] 2 [yciG] [yciG]
* * ÷ NZ_CP009273 1310394 1310443 50 2 [0] [0] 2 yciG/trpA general stress protein/tryptophan synthase subunit alpha
* * ÷ NZ_CP009273 1310675 1310708 34 3 [1] [0] 2 trpA tryptophan synthase subunit alpha
* * ÷ NZ_CP009273 1314613 1314666 54 2 [0] [0] 2 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD
* * ÷ NZ_CP009273 1316235 1316267 33 2 [1] [1] 2 trpE anthranilate synthase component I
* * ÷ NZ_CP009273 1319895 1319938 44 2 [0] [1] 2 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1320529 1320589 61 3 [1] [0] 3 yciQ DUF2207 domain‑containing protein
* * ÷ NZ_CP009273 1323507 1323552 46 3 [1] [1] 2 yciK/sohB YciK family oxidoreductase/protease SohB
* * ÷ NZ_CP009273 1323671 1323747 77 2 [1] [0] 4 sohB protease SohB
* * ÷ NZ_CP009273 1324827 1324883 57 2 [1] [1] 2 yciN YciN family protein
* * ÷ NZ_CP009273 1326230 1326264 35 3 [1] [1] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1326422 1326446 25 2 [1] [1] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1327639 1327854 216 2 [1] [1] 2 topA type I DNA topoisomerase
* * ÷ NZ_CP009273 1331159 1331208 50 2 [1] [1] 2 acnA aconitate hydratase AcnA
* * ÷ NZ_CP009273 1334294 1334392 99 2 [1] [1] 4 [pgpB] [pgpB]
* * ÷ NZ_CP009273 1334483 1334514 32 2 [1] [1] 2 [lapA] [lapA]
* * ÷ NZ_CP009273 1335945 1336049 105 2 [1] [1] 2 [lapB] [lapB]
* * ÷ NZ_CP009273 1336407 1336468 62 3 [1] [1] 2 pyrF orotidine‑5'‑phosphate decarboxylase
* * ÷ NZ_CP009273 1343879 1343887 9 3 [1] [0] 3 yciW CMD domain‑containing protein
* * ÷ NZ_CP009273 1344482 1344497 16 4 [1] [0] 2 yciW/fabI CMD domain‑containing protein/enoyl‑ACP reductase FabI
* * ÷ NZ_CP009273 1345636 1345669 34 2 [1] [1] 2 [ycjD] [ycjD]
* * ÷ NZ_CP009273 1349521 1349521 1 2 [0] [0] 2 sapB putrescine ABC transporter permease SapB
* * ÷ NZ_CP009273 1350802 1350814 13 2 [0] [1] 2 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1350990 1351037 48 2 [1] [1] 6 sapA peptide ABC transporter substrate‑binding protein SapA
* * ÷ NZ_CP009273 1354052 1354077 26 2 [1] [0] 2 puuA glutamate‑putrescine ligase
* * ÷ NZ_CP009273 1356889 1356944 56 2 [0] [1] 2 puuR/puuC HTH‑type transcriptional regulator PuuR/aldehyde dehydrogenase PuuC
* * ÷ NZ_CP009273 1357566 1357626 61 2 [1] [1] 2 puuC aldehyde dehydrogenase PuuC
* * ÷ NZ_CP009273 1360755 1360764 10 2 [1] [1] 2 puuE 4‑aminobutyrate transaminase
* * ÷ NZ_CP009273 1362014 1362046 33 3 [1] [1] 2 pspF phage shock protein operon transcriptional activator
* * ÷ NZ_CP009273 1362152 1362195 44 3 [1] [1] 2 [pspF] [pspF]
* * ÷ NZ_CP009273 1362286 1362351 66 2 [1] [1] 2 [pspA] [pspA]
* * ÷ NZ_CP009273 1368010 1368050 41 2 [1] [0] 2 ycjO sugar ABC transporter permease
* * ÷ NZ_CP009273 1368096 1368132 37 2 [0] [1] 2 ycjO sugar ABC transporter permease
* * ÷ NZ_CP009273 1369120 1369160 41 2 [1] [1] 2 ycjP carbohydrate ABC transporter permease
* * ÷ NZ_CP009273 1373025 1373066 42 2 [1] [0] 2 ycjT kojibiose phosphorylase
* * ÷ NZ_CP009273 1378992 1379031 40 2 [1] [1] 3 ycjX YcjX family protein
* * ÷ NZ_CP009273 1386218 1386230 13 2 [1] [0] 3 ycjY/pgrR alpha/beta hydrolase/DNA‑binding transcriptional regulator PgrR
* * ÷ NZ_CP009273 1392235 1392279 45 3 [1] [1] 2 uspE universal stress protein UspE
* * ÷ NZ_CP009273 1396374 1396405 32 3 [1] [1] 2 abgB p‑aminobenzoyl‑glutamate hydrolase subunit AbgB
* * ÷ NZ_CP009273 1399836 1399856 21 2 [1] [1] 2 abgR LysR family transcriptional regulator
* * ÷ NZ_CP009273 1410153 1410165 13 2 [1] [1] 3 recE exodeoxyribonuclease VIII
* * ÷ NZ_CP009273 1411889 1411975 87 2 [0] [1] 2 racC protein RacC
* * ÷ NZ_CP009273 1417954 1417996 43 2 [1] [1] 3 BW25113_RS26130/trkG hypothetical protein/Trk system potassium transporter TrkG
* * ÷ NZ_CP009273 1421033 1421043 11 2 [1] [1] 2 ynaA phage tail length tape measure family protein
* * ÷ NZ_CP009273 1431318 1431366 49 2 [1] [1] 2 ompN/nifJ porin OmpN/pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1434896 1434933 38 2 [0] [1] 2 nifJ pyruvate:ferredoxin (flavodoxin) oxidoreductase
* * ÷ NZ_CP009273 1437126 1437186 61 2 [1] [1] 3 ldhA/ydbH D‑lactate dehydrogenase/YdbH family protein
* * ÷ NZ_CP009273 1442920 1442930 11 3 [0] [1] 4 feaB phenylacetaldehyde dehydrogenase
* * ÷ NZ_CP009273 1459379 1459441 63 2 [1] [1] 2 [BW25113_RS25580] [BW25113_RS25580]
* * ÷ NZ_CP009273 1496452 1496543 92 2 [1] [1] 2 tehB/ydcL tellurite resistance methyltransferase TehB/DUF3313 domain‑containing protein
* * ÷ NZ_CP009273 1513809 1513821 13 2 [1] [1] 2 curA NADPH‑dependent curcumin/dihydrocurcumin reductase
* * ÷ NZ_CP009273 1524590 1524664 75 2 [0] [1] 2 BW25113_RS25600 protein YncO
* * ÷ NZ_CP009273 1559326 1559341 16 2 [0] [1] 2 dosP oxygen‑sensing cyclic‑di‑GMP phosphodiesterase
* * ÷ NZ_CP009273 1577951 1577998 48 3 [0] [0] 2 ydeO/safA acid stress response transcriptional regulator YdeO/two‑component system connector SafA
* * ÷ NZ_CP009273 1592543 1592604 62 2 [0] [1] 2 BW25113_RS07915/lsrK ECSE_1600 family autotransporter/autoinducer‑2 kinase
* * ÷ NZ_CP009273 1618943 1619013 71 2 [0] [1] 2 ydeI/ydeJ YdeI family stress tolerance OB fold protein/2‑oxo‑tetronate isomerase
* * ÷ NZ_CP009273 1631988 1632043 56 3 [1] [0] 2 [gnsB] [gnsB]
* * ÷ NZ_CP009273 1677521 1677541 21 3 [1] [1] 3 rstB two‑component system sensor histidine kinase RstB
* * ÷ NZ_CP009273 1703176 1703192 17 2 [1] [1] 2 rsxC electron transport complex subunit RsxC
* * ÷ NZ_CP009273 1748968 1749015 48 2 [0] [1] 2 ydhY/fumD ferredoxin‑like protein/fumarate hydratase FumD
* * ÷ NZ_CP009273 1786643 1786676 34 2 [1] [1] 2 nlpC NlpC/P60 family protein
* * ÷ NZ_CP009273 1787582 1787619 38 2 [0] [1] 2 btuD vitamin B12 ABC transporter ATP‑binding protein BtuD
* * ÷ NZ_CP009273 1800462 1800530 69 2 [1] [1] 2 ydiY/pfkB YdiY family protein/6‑phosphofructokinase II
* * ÷ NZ_CP009273 1829683 1829701 19 2 [0] [1] 2 ydjZ TVP38/TMEM64 family protein
* * ÷ NZ_CP009273 1882674 1882779 106 3 [1] [1] 2 fadD long‑chain‑fatty‑acid‑‑CoA ligase FadD
* * ÷ NZ_CP009273 1888046 1888147 102 3 [1] [1] 2 yoaB/yoaC RidA family protein/DUF1889 family protein
* * ÷ NZ_CP009273 1912092 1912110 19 3 [1] [1] 2 yebT lipid‑binding membrane homeostasis protein YebT
* * ÷ NZ_CP009273 1982064 1982153 90 2 [1] [1] 2 yecR/ftnA YecR‑like lipofamily protein/non‑heme ferritin
* * ÷ NZ_CP009273 2050711 2050743 33 2 [1] [1] 2 yeeN YebC/PmpR family DNA‑binding transcriptional regulator
* * ÷ NZ_CP009273 2051091 2051127 37 2 [1] [1] 2 yeeN/BW25113_RS10360 YebC/PmpR family DNA‑binding transcriptional regulator/tRNA‑Asn
* * ÷ NZ_CP009273 2083503 2083524 22 3 [1] [1] 2 hisL his operon leader peptide
* * ÷ NZ_CP009273 2084040 2084089 50 2 [0] [1] 2 hisG ATP phosphoribosyltransferase
* * ÷ NZ_CP009273 2097064 2097088 25 2 [0] [1] 2 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2097368 2097413 46 2 [1] [0] 2 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2097483 2097575 93 2 [0] [1] 2 wbbK glycosyltransferase family 1 protein
* * ÷ NZ_CP009273 2100135 2100235 101 2 [1] [1] 2 wzy O16 family O‑antigen polymerase
* * ÷ NZ_CP009273 2100464 2100500 37 3 [1] [1] 2 wzy O16 family O‑antigen polymerase
* * ÷ NZ_CP009273 2100792 2100838 47 2 [0] [1] 2 glf UDP‑galactopyranose mutase
* * ÷ NZ_CP009273 2103103 2103150 48 2 [1] [1] 2 rfbC dTDP‑4‑dehydrorhamnose 3,5‑epimerase
* * ÷ NZ_CP009273 2112195 2112207 13 2 [1] [0] 2 wzxC colanic acid undecaprenyl disphosphate flippase WzxC
* * ÷ NZ_CP009273 2118178 2118216 39 2 [1] [1] 2 wcaI colanic acid biosynthesis fucosyltransferase WcaI
* * ÷ NZ_CP009273 2135282 2135286 5 2 [0] [1] 3 dcd dCTP deaminase
* * ÷ NZ_CP009273 2143844 2143890 47 2 [0] [0] 2 yegI protein kinase YegI
* * ÷ NZ_CP009273 2158048 2158087 40 2 [1] [1] 2 baeR two‑component system response regulator BaeR
* * ÷ NZ_CP009273 2170678 2170753 76 3 [1] [1] 2 [gatY] [gatY]
* * ÷ NZ_CP009273 2192973 2193051 79 2 [1] [1] 2 BW25113_RS25680 WGR and DUF4132 domain‑containing protein
* * ÷ NZ_CP009273 2211984 2212023 40 2 [1] [0] 2 yehY glycine betaine ABC transporter permease YehY
* * ÷ NZ_CP009273 2224774 2224839 66 2 [1] [0] 2 yohK CidB/LrgB family autolysis modulator
* * ÷ NZ_CP009273 2266664 2266760 97 2 [1] [1] 2 yejA extracellular solute‑binding protein
* * ÷ NZ_CP009273 2269026 2269030 5 2 [1] [0] 2 yejE ABC transporter permease
* * ÷ NZ_CP009273 2287083 2287104 22 2 [1] [1] 2 ccmF cytochrome c‑type biogenesis heme lyase CcmF
* * ÷ NZ_CP009273 2297185 2297210 26 2 [0] [1] 2 BW25113_RS25870 hypothetical protein
* * ÷ NZ_CP009273 2337281 2337326 46 2 [1] [1] 2 yfaL AIDA‑I family autotransporter adhesin YfaL/EhaC
* * ÷ NZ_CP009273 2337801 2337885 85 3 [1] [1] 3 yfaL/nrdA AIDA‑I family autotransporter adhesin YfaL/EhaC/ribonucleoside‑diphosphate reductase subunit alpha
* * ÷ NZ_CP009273 2345994 2346093 100 2 [1] [1] 2 glpT/glpA glycerol‑3‑phosphate transporter/anaerobic glycerol‑3‑phosphate dehydrogenase subunit A
* * ÷ NZ_CP009273 2348158 2348205 48 2 [1] [1] 2 glpB glycerol‑3‑phosphate dehydrogenase subunit GlpB
* * ÷ NZ_CP009273 2356752 2356797 46 3 [1] [1] 2 yfaY nicotinamide mononucleotide deamidase‑related protein YfaY
* * ÷ NZ_CP009273 2357862 2357926 65 2 [1] [1] 2 yfaZ/nudI YfaZ family protein/nucleoside triphosphatase NudI
* * ÷ NZ_CP009273 2367249 2367261 13 2 [1] [1] 2 menE o‑succinylbenzoate‑‑CoA ligase
* * ÷ NZ_CP009273 2368222 2368240 19 2 [1] [0] 2 menE o‑succinylbenzoate‑‑CoA ligase
* * ÷ NZ_CP009273 2370696 2370757 62 2 [1] [1] 2 menH 2‑succinyl‑6‑hydroxy‑2, 4‑cyclohexadiene‑1‑carboxylate synthase
* * ÷ NZ_CP009273 2456452 2456489 38 2 [0] [1] 3 fadL/BW25113_RS12235 long‑chain fatty acid transporter FadL/hypothetical protein
* * ÷ NZ_CP009273 2456626 2456688 63 2 [1] [0] 3 BW25113_RS12235 hypothetical protein
* * ÷ NZ_CP009273 2457469 2457525 57 2 [1] [1] 2 BW25113_RS12235 hypothetical protein
* * ÷ NZ_CP009273 2462818 2463180 363 4 [1] [0] 2 BW25113_RS12270 hypothetical protein
* * ÷ NZ_CP009273 2518587 2518607 21 2 [1] [1] 2 BW25113_RS12560 outer membrane protein
* * ÷ NZ_CP009273 2531914 2531968–2531962 49–55 2 [1] [1] 2 yfeS/cysM WGR domain‑containing protein/cysteine synthase B
* * ÷ NZ_CP009273 2557641 2557664 24 2 [1] [0] 2 BW25113_RS12770 hypothetical protein
* * ÷ NZ_CP009273 2563446 2563474 29 3 [1] [0] 2 eutJ ethanolamine utilization protein EutJ
* * ÷ NZ_CP009273 2588974 2589012 39 2 [0] [0] 2 tmcA tRNA cytosine(34) acetyltransferase TmcA
* * ÷ NZ_CP009273 2616218 2616287 70 2 [1] [1] 2 [purN] [purN]
* * ÷ NZ_CP009273 2617867 2617898 32 2 [1] [1] 3 ppk1 polyphosphate kinase 1
* * ÷ NZ_CP009273 2622940 2623042 103 3 [1] [1] 3 yfgG/yfgH YfgG family protein/glycine zipper 2TM domain‑containing protein
* * ÷ NZ_CP009273 2640208 2640250 43 2 [1] [1] 2 pbpC peptidoglycan glycosyltransferase PbpC
* * ÷ NZ_CP009273 2681150 2681175 26 3 [0] [1] 2 glrR two‑component system response regulator GlrR
* * ÷ NZ_CP009273 2686070 2686120 51 3 [1] [0] 2 purL phosphoribosylformylglycinamidine synthase
* * ÷ NZ_CP009273 2687265 2687283 19 2 [1] [1] 2 purL phosphoribosylformylglycinamidine synthase
* * ÷ NZ_CP009273 2693999 2694011 13 2 [1] [0] 2 acpS holo‑ACP synthase
* * ÷ NZ_CP009273 2696976 2697018 43 2 [1] [1] 2 rnc ribonuclease III
* * ÷ NZ_CP009273 2699394 2699432 39 2 [1] [0] 2 lepA translation elongation factor 4
* * ÷ NZ_CP009273 2704242 2704274 33 2 [1] [1] 2 nadB L‑aspartate oxidase
* * ÷ NZ_CP009273 2715374 2715472 99 2 [1] [1] 2 pat protein lysine acetyltransferase
* * ÷ NZ_CP009273 2727825 2727828 4 2 [0] [1] 2 pgeF purine nucleoside phosphorylase YfiH
* * ÷ NZ_CP009273 2767253 2767365 113 2 [1] [1] 2 BW25113_RS13770 hypothetical protein
* * ÷ NZ_CP009273 2768173 2768299 127 2 [1] [1] 3 BW25113_RS13770 hypothetical protein
* * ÷ NZ_CP009273 2786833 2786850 18 2 [0] [1] 2 gabT 4‑aminobutyrate‑‑2‑oxoglutarate transaminase
* * ÷ NZ_CP009273 2877647 2877673 27 2 [0] [1] 3 casA/cas3 type I‑E CRISPR‑associated protein Cse1/CasA/CRISPR‑associated helicase/endonuclease Cas3
* * ÷ NZ_CP009273 2886166 2886168 3 2 [0] [0] 2 ygcN FAD‑dependent oxidoreductase
* * ÷ NZ_CP009273 2934456 2934459 4 2 [0] [0] 3 rlmM 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM
* * ÷ NZ_CP009273 2980640 2980666 27 2 [1] [0] 2 yqeG/yqeH amino acid permease/helix‑turn‑helix transcriptional regulator
* * ÷ NZ_CP009273 2987466 2987513 48 2 [0] [1] 2 BW25113_RS14845 lytic transglycosylase domain‑containing protein
* * ÷ NZ_CP009273 2988485 2988545 61 2 [0] [0] 2 BW25113_RS14850/BW25113_RS26010 response regulator transcription factor/hypothetical protein
* * ÷ NZ_CP009273 3046713 3046765 53 2 [1] [1] 4 ubiH 2‑octaprenyl‑6‑methoxyphenyl hydroxylase
* * ÷ NZ_CP009273 3053578 3053637 60 3 [1] [1] 3 argP DNA‑binding transcriptional regulator ArgP
* * ÷ NZ_CP009273 3165523 3165557 35 4 [1] [1] 2 ygiZ DUF2645 family protein
* * ÷ NZ_CP009273 3166364 3166373 10 2 [1] [0] 3 mdaB NADPH:quinone oxidoreductase MdaB
* * ÷ NZ_CP009273 3354257 3354288 32 2 [1] [0] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein
* * ÷ NZ_CP009273 3354473 3354493 21 2 [0] [1] 2 gltD/gltF glutamate synthase subunit GltD/DUF1120 domain‑containing protein
* * ÷ NZ_CP009273 3460343 3460353 11 2 [0] [1] 3 [bfd] [bfd]
* * ÷ NZ_CP009273 3577907 3577985 79 2 [0] [1] 2 [BW25113_RS25760] [BW25113_RS25760]
* * ÷ NZ_CP009273 3617288 3617288 1 2 [0] [0] 2 BW25113_RS18035 lyase
* * ÷ NZ_CP009273 3623932 3623954 23 2 [1] [1] 2 yhiI HlyD family efflux transporter periplasmic adaptor subunit
* * ÷ NZ_CP009273 3644661 3644682 22 2 [1] [1] 2 BW25113_RS18155 hypothetical protein
* * ÷ NZ_CP009273 3751302 3751377 76 2 [0] [1] 2 [selB] [selB]
* * ÷ NZ_CP009273 3763218 3763263 46 2 [1] [0] 2 BW25113_RS26240/yibH Imm57 family immunity protein/HlyD family secretion protein
* * ÷ NZ_CP009273 3792671 3792691 21 3 [1] [0] 2 [waaU] [waaU]
* * ÷ NZ_CP009273 3792839 3792904 66 2 [1] [1] 4 waaZ 3‑deoxy‑D‑manno‑oct‑2‑ulosonate III transferase WaaZ
* * ÷ NZ_CP009273 3794730 3794745 16 2 [0] [1] 2 rfaJ lipopolysaccharide 1,2‑glucosyltransferase RfaJ
* * ÷ NZ_CP009273 3796264 3796325 62 2 [1] [1] 2 waaO lipopolysaccharide 3‑alpha‑galactosyltransferase
* * ÷ NZ_CP009273 3797716 3797747 32 2 [1] [1] 2 rfaS LPS core biosynthesis protein RfaS
* * ÷ NZ_CP009273 3881620 3881717 98 3 [1] [1] 2 mnmE/tnaC tRNA uridine‑5‑carboxymethylaminomethyl(34) synthesis GTPase MnmE/tryptophanase leader peptide
* * ÷ NZ_CP009273 3942080 3942117 38 2 [1] [1] 2 yifB YifB family Mg chelatase‑like AAA ATPase
* * ÷ NZ_CP009273 4016755 4016775 21 2 [0] [1] 2 tatC Sec‑independent protein translocase subunit TatC
* * ÷ NZ_CP009273 4085291 4085308 18 2 [1] [0] 2 frvB PTS fructose‑like transporter subunit IIBC
* * ÷ NZ_CP009273 4123587 4123648 62 2 [0] [1] 3 metF/katG methylenetetrahydrofolate reductase/catalase/peroxidase HPI
* * ÷ NZ_CP009273 4212412 4212509 98 3 [1] [1] 2 [espL4] [espL4]
* * ÷ NZ_CP009273 4241448 4241500 53 2 [1] [1] 2 BW25113_RS20970 SopA family protein
* * ÷ NZ_CP009273 4261907 4261930 24 2 [1] [1] 2 uvrA excinuclease ABC subunit UvrA
* * ÷ NZ_CP009273 4294335 4294352 18 3 [1] [1] 2 ytcA/yjcS YtcA family lipoprotein/alkyl sulfatase YjcS
* * ÷ NZ_CP009273 4305516 4305575 60 3 [1] [1] 2 phnN ribose 1,5‑bisphosphokinase
* * ÷ NZ_CP009273 4364125 4364146 22 2 [1] [0] 2 yjeJ/epmB YjeJ family protein/EF‑P beta‑lysylation protein EpmB
* * ÷ NZ_CP009273 4417277 4417389 113 3 [1] [1] 2 yjfZ/BW25113_RS21850 DUF2686 family protein/TetR/AcrR family transcriptional regulator
* * ÷ NZ_CP009273 4465244 4465254 11 2 [1] [1] 2 [BW25113_RS22080] [BW25113_RS22080]
* * ÷ NZ_CP009273 4476480 4476493 14 2 [0] [1] 2 lptF LPS export ABC transporter permease LptF
* * ÷ NZ_CP009273 4529482 4529508 27 2 [1] [0] 2 nanC/fimB N‑acetylneuraminic acid outer membrane channel NanC/type 1 fimbria switch DNA invertase FimB
* * ÷ NZ_CP009273 4546382 4546391 10 3 [0] [0] 2 yjiC/idlP YjfZ/YjiC family protein/iraD leader peptide IdlP

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP009273 360104 =NA (NA)30 (2.690) 20/168 0.0 63.8% intergenic (‑35/+251) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
?NZ_CP009273 = 360286 17 (1.520)intergenic (‑217/+69) lacZ/BW25113_RS23320 beta‑galactosidase/relaxase/mobilization nuclease domain‑containing protein
* ? NZ_CP009273 = 45325075 (0.450)4 (0.400) 4/150 0.6 55.3% intergenic (+57/‑425) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA
?NZ_CP009273 = 4532803 2 (0.200)intergenic (+353/‑129) fimE/fimA type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA