breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
RA | 748,772 | C→T | A385T (GCA→ACA) | gltA ← | citrate synthase |
MC JC | 1,612,767 | Δ11 bp | coding (389‑399/666 nt) | marC ← | UPF0056 family inner membrane protein |
RA | 1,613,342 | T→C | intergenic (‑177/‑35) | marC ← / → marR | UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance |
RA | 4,029,087 | A→T | noncoding (197/1542 nt) | rrsA → | 16S ribosomal RNA of rrnA operon |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP009273 | 360104 = | 57 (1.170) | 97 (1.990) | 59/398 | 0.0 | 64.2% | intergenic (‑38/+557) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |
? | CP009273 | = 360286 | 51 (1.040) | intergenic (‑220/+375) | lacZ/lacI | pseudogene, truncated/DNA‑binding transcriptional repressor |