breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | ||||||
---|---|---|---|---|---|---|
evidence | position | mutation | freq | annotation | gene | description |
RA | 6,332 | C→A | 6.3% | R17R (CGG→CGT) | trmE ← | GTPase |
RA | 6,339 | T→A | 8.0% | Q15L (CAG→CTG) | trmE ← | GTPase |
RA | 6,346 | T→G | 5.7% | T13P (ACG→CCG) | trmE ← | GTPase |
RA | 65,069 | G→T | 5.7% | G43C (GGC→TGC) | betA‑I → | choline dehydrogenase |
RA | 195,424 | G→A | 9.9% | V310V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
RA | 195,505 | C→G | 12.2% | A337A (GCC→GCG) | PP_0168 → | putative surface adhesion protein |
RA | 195,559 | C→A | 28.6% | T355T (ACC→ACA) | PP_0168 → | putative surface adhesion protein |
RA | 195,589 | T→C | 11.2% | N365N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
RA | 195,634 | C→T | 28.0% | T380T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
RA | 195,685 | T→C | 11.2% | T397T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 195,724 | A→G | 9.7% | V410V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
RA | 195,732 | A→C | 18.2% | N413T (AAC→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 195,766 | G→C | 9.2% | A424A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
RA | 195,769 | T→C | 11.5% | G425G (GGT→GGC) | PP_0168 → | putative surface adhesion protein |
RA | 195,826 | C→T | 10.0% | G444G (GGC→GGT) | PP_0168 → | putative surface adhesion protein |
RA | 195,852 | G→A | 10.2% | S453N (AGC→AAC) | PP_0168 → | putative surface adhesion protein |
RA | 195,895 | G→C | 8.6% | T467T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,027 | T→C | 11.1% | T511T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,132 | G→C | 13.4% | T546T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,195 | G→C | 6.1% | T567T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,234 | T→C | 12.6% | T580T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,285 | T→C | 7.8% | T597T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,306 | T→C | 22.4% | N604N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
RA | 196,327 | A→C | 17.4% | T611T (ACA→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,351 | C→G | 24.7% | T619T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
RA | 196,390 | T→C | 20.6% | D632D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
RA | 196,489 | T→C | 18.7% | N665N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
RA | 196,495 | G→C | 16.8% | T667T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,579 | G→A | 35.3% | V695V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
RA | 196,627 | A→C | 21.7% | T711T (ACA→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,672 | G→A | 16.7% | K726K (AAG→AAA) | PP_0168 → | putative surface adhesion protein |
RA | 196,705 | G→C | 11.0% | A737A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
RA | 196,759 | T→C | 25.3% | T755T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,885 | C→T | 18.2% | T797T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
RA | 196,924 | G→A | 13.3% | V810V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
RA | 196,927 | A→C | 18.5% | T811T (ACA→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 196,951 | C→G | 11.1% | T819T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
RA | 196,972 | G→A | 18.1% | K826K (AAG→AAA) | PP_0168 → | putative surface adhesion protein |
RA | 196,990 | T→C | 9.2% | D832D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
RA | 197,032 | C→T | 6.1% | T846T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
RA | 197,089 | T→C | 19.5% | N865N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
RA | 197,128 | T→C | 8.0% | D878D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
RA | 197,129 | G→A | 7.0% | A879T (GCC→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 197,134 | C→T | 9.5% | T880T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
RA | 197,179 | A→G | 18.7% | V895V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
RA | 197,185 | C→T | 5.5% | T897T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
RA | 197,479 | G→A | 7.6% | V995V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
RA | 197,496 | T→C | 14.6% | I1001T (ATC→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 197,590 | T→C | 13.5% | D1032D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
RA | 197,632 | T→C | 28.4% | T1046T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 197,695 | G→C | 9.7% | T1067T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
RA | 197,866 | G→C | 21.1% | A1124A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
RA | 197,869 | T→C | 18.3% | G1125G (GGT→GGC) | PP_0168 → | putative surface adhesion protein |
RA | 199,360 | T→C | 9.4% | A1622A (GCT→GCC) | PP_0168 → | putative surface adhesion protein |
RA | 199,477 | T→C | 6.6% | A1661A (GCT→GCC) | PP_0168 → | putative surface adhesion protein |
RA | 199,480 | T→C | 12.2% | G1662G (GGT→GGC) | PP_0168 → | putative surface adhesion protein |
RA | 199,550 | T→C | 15.2% | L1686L (TTG→CTG) | PP_0168 → | putative surface adhesion protein |
RA | 199,744 | T→C | 6.4% | N1750N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
RA | 199,915 | T→C | 7.0% | F1807F (TTT→TTC) | PP_0168 → | putative surface adhesion protein |
RA | 200,338 | G→C | 7.0% | V1948V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
RA | 200,386 | C→T | 6.5% | D1964D (GAC→GAT) | PP_0168 → | putative surface adhesion protein |
RA | 200,650 | T→C | 7.4% | D2052D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
RA | 201,859 | G→C | 7.1% | A2455A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
RA | 202,117 | T→C | 11.0% | S2541S (AGT→AGC) | PP_0168 → | putative surface adhesion protein |
RA | 203,674 | T→C | 6.7% | D3060D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
RA | 203,677 | T→C | 5.8% | G3061G (GGT→GGC) | PP_0168 → | putative surface adhesion protein |
RA | 205,651 | C→G | 6.6% | V3719V (GTC→GTG) | PP_0168 → | putative surface adhesion protein |
RA | 205,795 | T→A | 7.2% | A3767A (GCT→GCA) | PP_0168 → | putative surface adhesion protein |
RA | 205,801 | C→G | 5.1% | V3769V (GTC→GTG) | PP_0168 → | putative surface adhesion protein |
RA | 206,311 | G→C | 6.6% | V3939V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
RA | 211,096 | C→G | 7.8% | V5534V (GTC→GTG) | PP_0168 → | putative surface adhesion protein |
RA | 213,079 | C→T | 8.4% | G6195G (GGC→GGT) | PP_0168 → | putative surface adhesion protein |
RA | 213,601 | G→C | 5.4% | V6369V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
RA | 214,075 | G→A | 6.9% | P6527P (CCG→CCA) | PP_0168 → | putative surface adhesion protein |
RA | 215,377 | C→T | 6.0% | A6961A (GCC→GCT) | PP_0168 → | putative surface adhesion protein |
RA | 215,383 | A→G | 8.1% | E6963E (GAA→GAG) | PP_0168 → | putative surface adhesion protein |
RA | 278,742:1 | +A | 100% | intergenic (‑237/+77) | PP_0224 ← / ← sctC | Monooxygenase, DszC family/sulfur compound ABC transporter ‑ ATP‑binding subunit |
JC | 303,121 | +GCT | 41.7% | coding (1286/1314 nt) | envZ → | Osmolarity sensor protein EnvZ |
RA | 307,865:1 | +C | 100% | intergenic (+880/‑989) | hslO → / → PP_0254 | 33 kDa chaperonin/conserved protein of unknown function |
RA | 336,124:1 | +T | 100% | coding (209/237 nt) | PP_0278 → | conserved protein of unknown function |
RA | 353,067 | A→G | 100% | intergenic (+34/+84) | hisF → / ← cbcV | Imidazole glycerol phosphate synthase subunit HisF/choline / betaine / carnitine ABC transporter ‑ ATP binding subunit |
RA | 499,203 | A→G | 100% | intergenic (+47/‑249) | uhpA → / → PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
RA | 699,722 | A→G | 50.8% | intergenic (+115/‑129) | PP_t06 → / → PP_23SD | tRNA‑Ala/23S ribosomal RNA |
RA | 1,070,246:1 | +GA | 100% | intergenic (+46/+96) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger related‑protein |
RA | 1,126,645:1 | +C | 100% | intergenic (‑99/+50) | tdcG‑II ← / ← gcvP‑I | L‑serine dehydratase/glycine dehydrogenase |
JC | 1,195,377 | 30 bp→17 bp | 9.3% | coding (1516‑1545/1653 nt) | uxpA → | Lipoprotein UxpA |
RA | 1,327,121 | C→T | 59.9% | intergenic (+97/‑196) | PP_16SE → / → PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
RA | 1,349,365 | C→A | 5.6% | D20Y (GAC→TAC) | PP_1174 ← | conserved protein of unknown function |
RA | 1,419,548:1 | +C | 100% | intergenic (‑37/+99) | PP_1242 ← / ← PP_1244 | conserved protein of unknown function/conserved protein of unknown function |
RA | 1,499,480 | 2 bp→AC | 100% | intergenic (+57/‑106) | trpS → / → zapE | Tryptophan‑‑tRNA ligase/putative enzyme with nucleoside triphosphate hydrolase domain |
RA | 1,499,498 | 1 bp→CG | 100% | intergenic (+75/‑89) | trpS → / → zapE | Tryptophan‑‑tRNA ligase/putative enzyme with nucleoside triphosphate hydrolase domain |
RA | 1,499,506:1 | +C | 100% | intergenic (+83/‑81) | trpS → / → zapE | Tryptophan‑‑tRNA ligase/putative enzyme with nucleoside triphosphate hydrolase domain |
RA | 1,530,160 | C→T | 100% | R395C (CGT→TGT) noncoding (49/244 nt) |
ftsZ → PP_mr19 → |
Cell division protein FtsZ Xoo8 ncRNA |
JC | 1,531,732 | Δ107 bp | 23.3% | coding (38‑144/630 nt) | PP_1344 ← | conserved protein of unknown function |
RA | 1,617,782 | C→G | 11.3% | intergenic (‑37/+136) | PP_1417 ← / ← PP_1418 | putative Tricarboxylate transport protein TctB/putative Tricarboxylate transport protein TctC |
JC | 1,780,067 | Δ62 bp | 17.4% | intergenic (+26/+19) | PP_1587 → / ← dapC | NhaP‑type Na+/H+ and K+/H+ antiporters/N‑succinyl‑L,L‑diaminopimelate aminotransferase alternative |
RA | 1,844,166 | T→A | 100% | K210* (AAG→TAG) | gacS ← | Sensor protein GacS |
JC | 1,930,392 | Δ63 bp | 5.8% | [apeB] | [apeB] | |
RA | 1,932,638:1 | +C | 100% | intergenic (‑105/+45) | rluA ← / ← minE | 23S rRNA (746) and tRNA (32) pseudouridine synthase/Cell division topological specificity factor |
RA | 1,962,159:1 | +C | 7.4% | coding (422/1833 nt) | PP_1760 → | ABC transporter, ATP‑binding protein |
RA | 2,087,428 | G→A | 9.6% | intergenic (+241/+677) | PP_1865 → / ← aroH | transposase/Phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
RA | 2,550,125 | G→A | 56.2% | noncoding (1436/1522 nt) | PP_16SF → | 16S ribosomal RNA |
JC | 2,958,772 | Δ61 bp | 7.0% | intergenic (+38/+44) | PP_2589 → / ← PP_2590 | Aldehyde dehydrogenase family protein/Outer membrane ferric siderophore receptor |
RA | 3,142,272 | C→T | 100% | A74V (GCG→GTG) | PP_2758 → | putative Ribose ABC transporter, periplasmic ribose‑binding protein |
RA | 3,319,193 | G→A | 16.7% | intergenic (‑157/+35) | treSA ← / ← PP_2919 | trehalose synthase A/Transcriptional regulator, LysR family |
RA | 3,845,703:1 | +G | 100% | intergenic (‑70/+28) | PP_3394 ← / ← PP_3395 | putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/Transcriptional regulator, LysR family |
RA | 3,951,159 | T→C | 100% | intergenic (‑123/+72) | PP_3486 ← / ← PP_3487 | putative cytochrome c/conserved exported protein of unknown function |
RA | 3,951,161 | A→T | 100% | intergenic (‑125/+70) | PP_3486 ← / ← PP_3487 | putative cytochrome c/conserved exported protein of unknown function |
RA | 4,022,806 | C→G | 7.0% | intergenic (‑501/+167) | PP_3547 ← / ← emrB | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit |
RA | 4,022,807 | C→G | 6.9% | intergenic (‑502/+166) | PP_3547 ← / ← emrB | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit |
RA | 4,348,705 | A→G | 48.5% | intergenic (‑70/+404) | PP_3820 ← / ← galU | Group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
RA | 4,586,030 | 2 bp→TC | 100% | intergenic (+113/+101) | PP_4061 → / ← PP_4063 | conserved protein of unknown function/putative Long‑chain‑fatty‑acid‑CoA ligase |
RA | 4,586,033:1 | +G | 100% | intergenic (+116/+99) | PP_4061 → / ← PP_4063 | conserved protein of unknown function/putative Long‑chain‑fatty‑acid‑CoA ligase |
RA | 4,586,056:1 | +C | 100% | intergenic (+139/+76) | PP_4061 → / ← PP_4063 | conserved protein of unknown function/putative Long‑chain‑fatty‑acid‑CoA ligase |
RA | 4,740,805 | Δ1 bp | 100% | intergenic (+42/+711) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,740,816 | T→G | 100% | intergenic (+53/+700) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,740,819 | 2 bp→CT | 100% | intergenic (+56/+696) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,228:1 | +C | 27.3% | intergenic (+465/+288) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,229 | A→C | 72.7% | intergenic (+466/+287) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,230 | A→G | 27.3% | intergenic (+467/+286) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,231 | C→G | 70.9% | intergenic (+468/+285) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,232 | C→T | 29.1% | intergenic (+469/+284) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,234 | C→T | 69.1% | intergenic (+471/+282) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,235 | C→T | 30.9% | intergenic (+472/+281) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,236 | G→T | 69.0% | intergenic (+473/+280) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,237 | C→G | 69.1% | intergenic (+474/+279) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,238 | C→G | 30.9% | intergenic (+475/+278) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,239 | A→G | 69.1% | intergenic (+476/+277) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,240 | A→C | 30.9% | intergenic (+477/+276) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,241 | C→T | 30.9% | intergenic (+478/+275) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,243 | G→T | 67.2% | intergenic (+480/+273) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,244 | C→G | 67.3% | intergenic (+481/+272) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,245 | A→C | 67.3% | intergenic (+482/+271) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,254:1 | +T | 17.2% | intergenic (+491/+262) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,255 | C→T | 82.8% | intergenic (+492/+261) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,257 | A→C | 82.7% | intergenic (+494/+259) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,258 | A→G | 17.2% | intergenic (+495/+258) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,260 | C→G | 82.7% | intergenic (+497/+256) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,261 | A→C | 82.8% | intergenic (+498/+255) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,263 | A→C | 100% | intergenic (+500/+253) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,272 | A→G | 100% | intergenic (+509/+244) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,274 | A→C | 100% | intergenic (+511/+242) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,276 | G→C | 100% | intergenic (+513/+240) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,278 | C→T | 100% | intergenic (+515/+238) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,283:1 | +T | 100% | intergenic (+520/+233) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,289 | C→G | 100% | intergenic (+526/+227) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,292 | C→T | 100% | intergenic (+529/+224) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,294 | C→G | 100% | intergenic (+531/+222) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,296 | A→C | 100% | intergenic (+533/+220) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
RA | 4,741,298 | C→T | 100% | intergenic (+535/+218) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
JC | 4,775,320 | Δ160 bp | 5.6% | coding (3788‑3947/10413 nt) | pvdD ← | non‑ribosomal peptide synthetase |
RA | 4,808,173 | G→A | 30.6% | intergenic (‑282/‑273) | PP_4234 ← / → dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
JC | 4,808,175 | Δ14 bp | 100% | intergenic (‑284/‑258) | PP_4234 ← / → dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
JC | 4,808,177 | Δ103 bp | 72.7% | intergenic (‑286/‑167) | PP_4234 ← / → dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
JC | 4,864,374 | Δ63 bp | 9.7% | coding (1437‑1499/3489 nt) | smc ← | Chromosome partition protein Smc |
RA | 4,945,358 | T→C | 22.1% | intergenic (+718/+80) | PP_5673 → / ← flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
RA | 4,945,368 | A→G | 24.6% | intergenic (+728/+70) | PP_5673 → / ← flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
RA | 4,945,370 | C→T | 24.2% | intergenic (+730/+68) | PP_5673 → / ← flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
RA | 4,964,454 | C→T | 100% | D302N (GAC→AAC) | fleQ ← | Transcriptional regulator FleQ |
JC | 4,980,585 | +GGC | 100% | intergenic (‑24/+44) | PP_4387 ← / ← flgE | conserved exported protein of unknown function/Flagellar hook protein FlgE |
JC | 5,201,568 | Δ98 bp | 39.2% | intergenic (‑54/‑29) | PP_4582 ← / → PP_4583 | conserved membrane protein of unknown function/putative Peptidase |
JC | 5,555,608 | +GCC | 100% | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | conserved protein of unknown function/putative methyl‑accepting chemotaxis transducer |
RA | 5,664,432 | G→C | 6.8% | intergenic (+27/+24) | PP_4971 → / ← PP_4972 | putative Outer membrane‑bound lytic murein transglycolase A/conserved exported protein of unknown function |
RA | 5,674,750:1 | +G | 100% | intergenic (+112/+28) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding protein, acidic stress response factor |
RA | 5,674,753 | G→C | 100% | intergenic (+115/+25) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding protein, acidic stress response factor |
JC | 5,681,415 | +CGGG | 100% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
RA | 5,749,256 | T→C | 5.1% | T242A (ACC→GCC) | typA ← | ribosome associated GTPase |
JC | 5,859,118 | 40 bp→40 bp | 7.4% | coding (829‑868/1026 nt) | PP_5135 ← | ABC transporter, periplasmic binding protein |
RA | 6,013,885 | T→C | 100% | intergenic (+90/+20) | xpt → / ← PP_5266 | Xanthine phosphoribosyltransferase/putative acetyl‑CoA hydrolase family protein |
RA | 6,050,487 | C→G | 6.0% | P450R (CCG→CGG) | spoT → | bifunctional (p)ppGpp synthase/hydrolase |
JC | 6,077,996 | +TACT | 8.7% | coding (1230/1290 nt) | PP_5330 ← | Major facilitator family transporter |
RA | 6,132,525 | T→C | 20.9% | E443G (GAG→GGG) | copA‑II ← | copper resistance protein A |
RA | 6,132,542 | A→G | 16.8% | D437D (GAT→GAC) | copA‑II ← | copper resistance protein A |
RA | 6,151,153 | T→C | 5.6% | V55A (GTC→GCC) | PP_5395 → | conserved protein of unknown function |
Unassigned missing coverage evidence | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | AE015451 | 486307 | 486478 | 172 | 18 [17] | [17] 18 | [apaG] | [apaG] |
* | * | ÷ | AE015451 | 726776 | 726944 | 169 | 18 [13] | [17] 18 | PP_0620/PP_0621 | GntR family transcriptional regulator/conserved protein of unknown function |
* | * | ÷ | AE015451 | 926349 | 926559 | 211 | 19 [16] | [17] 18 | PP_0805 | Outer membrane efflux protein |
* | * | ÷ | AE015451 | 1367557 | 1367918 | 362 | 19 [17] | [17] 18 | [PP_1193] | [PP_1193] |
* | * | ÷ | AE015451 | 1421685 | 1422106 | 422 | 18 [17] | [16] 18 | PP_1246 | conserved exported protein of unknown function |
* | * | ÷ | AE015451 | 1544220 | 1544494 | 275 | 18 [17] | [13] 18 | [mdfA] | [mdfA] |
* | * | ÷ | AE015451 | 1691034 | 1691258 | 225 | 19 [17] | [17] 18 | [PP_1487] | [PP_1487] |
* | * | ÷ | AE015451 | 2027359 | 2027615 | 257 | 18 [16] | [16] 18 | wbpL | Glycosyl transferase WbpL |
* | * | ÷ | AE015451 | 2038128 | 2038477 | 350 | 18 [17] | [16] 18 | [rffE] | [rffE] |
* | * | ÷ | AE015451 | 2039460 | 2039718 | 259 | 19 [17] | [17] 18 | [rffE]–[PP_1812] | [rffE],[PP_1812] |
* | * | ÷ | AE015451 | 2053401 | 2053670 | 270 | 18 [17] | [17] 19 | [PP_1828]–[PP_1829] | [PP_1828],[PP_1829] |
* | * | ÷ | AE015451 | 2095107 | 2095331 | 225 | 18 [17] | [17] 19 | [alaA] | [alaA] |
* | * | ÷ | AE015451 | 2142198 | 2142592 | 395 | 18 [15] | [17] 18 | [PP_1897]–[PP_1898] | [PP_1897],[PP_1898] |
* | * | ÷ | AE015451 | 2478330 | 2478550 | 221 | 19 [17] | [17] 20 | PP_2172 | conserved exported protein of unknown function |
* | * | ÷ | AE015451 | 3848803 | 3849070 | 268 | 18 [16] | [17] 21 | PP_3397 | conserved exported protein of unknown function |
* | * | ÷ | AE015451 | 3985486 | 3985752 | 267 | 18 [17] | [17] 18 | [PP_3513]–[oplB] | [PP_3513],[oplB] |
* | * | ÷ | AE015451 | 4705255 | 4705416 | 162 | 18 [16] | [15] 18 | [kdpF] | [kdpF] |
* | * | ÷ | AE015451 | 4839197 | 4839381 | 185 | 23 [17] | [17] 18 | [PP_4254] | [PP_4254] |
* | * | ÷ | AE015451 | 5660455 | 5660679 | 225 | 18 [17] | [17] 19 | ligB | DNA ligase B |
* | * | ÷ | AE015451 | 5696550 | 5696783 | 234 | 18 [16] | [17] 18 | [hslV] | [hslV] |
* | * | ÷ | AE015451 | 5816935 | 5817185 | 251 | 18 [17] | [17] 18 | [pilT] | [pilT] |
* | * | ÷ | AE015451 | 6005830 | 6006138 | 309 | 19 [17] | [17] 18 | ydcJ | metalloprotein, putative enzyme |
Unassigned new junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | 5133 = | 67 (1.160) | 4 (0.070) | 4/324 | NT | 5.8% | coding (1250/1371 nt) | trmE | GTPase |
? | AE015451 | 5218 = | 66 (1.210) | coding (1165/1371 nt) | trmE | GTPase | |||||
* | ? | AE015451 | = 5141 | 67 (1.160) | 7 (0.130) | 6/324 | NT | 9.8% | coding (1242/1371 nt) | trmE | GTPase |
? | AE015451 | = 5208 | 66 (1.210) | coding (1175/1371 nt) | trmE | GTPase | |||||
* | ? | AE015451 | = 51828 | 56 (0.970) | 5 (0.100) | 5/310 | NT | 8.9% | coding (162/1272 nt) | czcC‑I | cobalt‑zinc‑cadmium resistance protein |
? | AE015451 | = 51812 | 51 (0.980) | coding (178/1272 nt) | czcC‑I | cobalt‑zinc‑cadmium resistance protein | |||||
* | ? | AE015451 | 94636 = | 57 (0.990) | 6 (0.110) | 6/324 | NT | 9.8% | coding (450/489 nt) | PP_0085 | conserved protein of unknown function |
? | AE015451 | 94723 = | 57 (1.040) | coding (363/489 nt) | PP_0085 | conserved protein of unknown function | |||||
* | ? | AE015451 | 106074 = | 47 (0.820) | 3 (0.050) | 3/326 | NT | 6.7% | intergenic (+148/‑60) | cynT/PP_0101 | carbonic anhydrase/putative sulfate transporter |
? | AE015451 | 106096 = | 39 (0.710) | intergenic (+170/‑38) | cynT/PP_0101 | carbonic anhydrase/putative sulfate transporter | |||||
* | ? | AE015451 | 128652 = | 22 (0.380) | 3 (0.060) | 3/310 | NT | 13.1% | coding (1130/2748 nt) | polA | DNA polymerase I, 5' ‑> 3' polymerase with 5' ‑‑> 3' and 3' ‑‑> 5' exonuclease activity |
? | AE015451 | 128668 = | 20 (0.380) | coding (1146/2748 nt) | polA | DNA polymerase I, 5' ‑> 3' polymerase with 5' ‑‑> 3' and 3' ‑‑> 5' exonuclease activity | |||||
* | ? | AE015451 | 199488 = | 62 (1.080) | 5 (0.090) | 5/332 | NT | 7.6% | coding (4994/26049 nt) | PP_0168 | putative surface adhesion protein |
? | AE015451 | 199512 = | 62 (1.110) | coding (5018/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
* | ? | AE015451 | 200330 = | 57 (0.990) | 6 (0.110) | 5/326 | NT | 9.9% | coding (5836/26049 nt) | PP_0168 | putative surface adhesion protein |
? | AE015451 | 209635 = | NA (NA) | coding (15141/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
* | ? | AE015451 | = 202317 | 68 (1.180) | 4 (0.070) | 3/326 | NT | 5.8% | coding (7823/26049 nt) | PP_0168 | putative surface adhesion protein |
? | AE015451 | = 208957 | NA (NA) | coding (14463/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
* | ? | AE015451 | = 204045 | NA (NA) | 4 (0.070) | 3/326 | NT | 18.1% | coding (9551/26049 nt) | PP_0168 | putative surface adhesion protein |
? | AE015451 | = 204062 | 19 (0.330) | coding (9568/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
* | ? | AE015451 | = 208067 | NA (NA) | 5 (0.090) | 5/326 | NT | NA | coding (13573/26049 nt) | PP_0168 | putative surface adhesion protein |
? | AE015451 | = 209370 | NA (NA) | coding (14876/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
* | ? | AE015451 | 248876 = | 46 (0.800) | 6 (0.120) | 6/302 | NT | 14.4% | coding (457/633 nt) | PP_0198 | putative transporter |
? | AE015451 | 248896 = | 31 (0.610) | coding (477/633 nt) | PP_0198 | putative transporter | |||||
* | ? | AE015451 | 294643 = | 55 (0.950) | 4 (0.070) | 4/326 | NT | 7.2% | coding (47/813 nt) | ssuB | Aliphatic sulfonates import ATP‑binding protein SsuB |
? | AE015451 | 294683 = | 50 (0.910) | coding (87/813 nt) | ssuB | Aliphatic sulfonates import ATP‑binding protein SsuB | |||||
* | ? | AE015451 | = 299905 | 67 (1.160) | 4 (0.070) | 4/332 | NT | 5.9% | coding (1221/2586 nt) | yhgF | putative transcriptional accessory protein |
? | AE015451 | = 299912 | 62 (1.110) | coding (1214/2586 nt) | yhgF | putative transcriptional accessory protein | |||||
* | ? | AE015451 | 300399 = | 50 (0.870) | 4 (0.070) | 4/326 | NT | 7.5% | coding (727/2586 nt) | yhgF | putative transcriptional accessory protein |
? | AE015451 | 300509 = | 51 (0.930) | coding (617/2586 nt) | yhgF | putative transcriptional accessory protein | |||||
* | ? | AE015451 | 331563 = | 56 (0.970) | 3 (0.050) | 3/324 | NT | 5.5% | coding (1453/2298 nt) | PP_0272 | Outer membrane ferric siderophore receptor |
? | AE015451 | 331586 = | 50 (0.920) | coding (1476/2298 nt) | PP_0272 | Outer membrane ferric siderophore receptor | |||||
* | ? | AE015451 | 400798 = | 43 (0.750) | 4 (0.070) | 4/326 | NT | 8.7% | coding (384/1059 nt) | PP_0334 | transposase |
? | AE015451 | 400827 = | 43 (0.780) | coding (413/1059 nt) | PP_0334 | transposase | |||||
* | ? | AE015451 | = 407662 | 34 (0.590) | 5 (0.090) | 4/336 | NT | 12.6% | coding (343/1641 nt) | aceF | AceF‑S‑acetyldihydrolipoate |
? | AE015451 | = 407678 | 36 (0.640) | coding (327/1641 nt) | aceF | AceF‑S‑acetyldihydrolipoate | |||||
* | ? | AE015451 | 449057 = | 51 (0.880) | 4 (0.070) | 4/326 | NT | 7.5% | coding (228/1779 nt) | PP_0370 | Acyl‑CoA dehydrogenase family protein |
? | AE015451 | 449107 = | 50 (0.910) | coding (278/1779 nt) | PP_0370 | Acyl‑CoA dehydrogenase family protein | |||||
* | ? | AE015451 | = 487811 | 36 (0.620) | 3 (0.050) | 3/330 | NT | 8.0% | coding (491/990 nt) | pdxA | 4‑hydroxythreonine‑4‑phosphate dehydrogenase |
? | AE015451 | = 487820 | 34 (0.610) | coding (482/990 nt) | pdxA | 4‑hydroxythreonine‑4‑phosphate dehydrogenase | |||||
* | ? | AE015451 | 503644 = | 47 (0.820) | 4 (0.070) | 4/324 | NT | 9.8% | coding (675/828 nt) | PP_0414 | Polyamine ABC transporter, permease protein |
? | AE015451 | 503701 = | 29 (0.530) | coding (732/828 nt) | PP_0414 | Polyamine ABC transporter, permease protein | |||||
* | ? | AE015451 | 608871 = | 78 (1.350) | 4 (0.070) | 4/328 | NT | 5.3% | coding (742/813 nt) | PP_0524 | putative Periplasmic cobalamin‑binding protein HutB |
? | AE015451 | 608902 = | 68 (1.230) | coding (773/813 nt) | PP_0524 | putative Periplasmic cobalamin‑binding protein HutB | |||||
* | ? | AE015451 | 611504 = | NA (NA) | 7 (0.130) | 7/328 | NT | NA | coding (401/966 nt) | PP_0526 | transposase |
? | AE015451 | 611533 = | NA (NA) | coding (430/966 nt) | PP_0526 | transposase | |||||
* | ? | AE015451 | = 611935 | NA (NA) | 5 (0.090) | 5/324 | NT | NA | coding (832/966 nt) | PP_0526 | transposase |
? | AE015451 | = 611960 | NA (NA) | coding (857/966 nt) | PP_0526 | transposase | |||||
* | ? | AE015451 | = 642180 | 49 (0.850) | 4 (0.070) | 4/334 | NT | 8.3% | coding (807/1107 nt) | acoC | Dihydrolipoyllysine‑residue acetyltransferase component of acetoin cleaving system |
? | AE015451 | = 642299 | 41 (0.730) | coding (688/1107 nt) | acoC | Dihydrolipoyllysine‑residue acetyltransferase component of acetoin cleaving system | |||||
* | ? | AE015451 | 665413 = | 64 (1.110) | 4 (0.070) | 4/328 | NT | 6.1% | coding (2279/4902 nt) | yfhM | lipoprotein of unknown function |
? | AE015451 | 665429 = | 62 (1.120) | coding (2295/4902 nt) | yfhM | lipoprotein of unknown function | |||||
* | ? | AE015451 | 665680 = | 60 (1.040) | 3 (0.060) | 3/322 | NT | 5.1% | coding (2546/4902 nt) | yfhM | lipoprotein of unknown function |
? | AE015451 | 665839 = | 55 (1.010) | coding (2705/4902 nt) | yfhM | lipoprotein of unknown function | |||||
* | ? | AE015451 | 676190 = | 56 (0.970) | 3 (0.050) | 3/328 | NT | 5.4% | coding (221/750 nt) | PP_0578 | putative Methyltransferase |
? | AE015451 | 676267 = | 51 (0.920) | coding (144/750 nt) | PP_0578 | putative Methyltransferase | |||||
* | ? | AE015451 | 689649 = | 59 (1.020) | 3 (0.050) | 3/324 | NT | 5.1% | coding (695/714 nt) | PP_0590 | Transcriptional regulator, ArsR family |
? | AE015451 | 689680 = | 56 (1.030) | intergenic (+12/+9) | PP_0590/PP_0591 | Transcriptional regulator, ArsR family/Adenine deaminase | |||||
* | ? | AE015451 | = 729813 | 40 (0.690) | 3 (0.050) | 3/338 | NT | 6.7% | coding (343/741 nt) | yfiH | Uncharacterized protein YfiH |
? | AE015451 | = 729829 | 44 (0.770) | coding (359/741 nt) | yfiH | Uncharacterized protein YfiH | |||||
* | ? | AE015451 | 734319 = | 27 (0.470) | 7 (0.130) | 6/320 | NT | 22.1% | coding (998/1296 nt) | ndh | NADH dehydrogenase |
? | AE015451 | 734381 = | 24 (0.440) | coding (936/1296 nt) | ndh | NADH dehydrogenase | |||||
* | ? | AE015451 | = 740527 | 36 (0.620) | 5 (0.090) | 4/324 | NT | 12.6% | coding (100/1209 nt) | pilC | Type 4 fimbrial assembly protein PilC |
? | AE015451 | = 740537 | 35 (0.640) | coding (90/1209 nt) | pilC | Type 4 fimbrial assembly protein PilC | |||||
* | ? | AE015451 | 741491 = | NA (NA) | 7 (0.130) | 5/328 | NT | NA | intergenic (+91/‑409) | PP_t12/PP_0635 | tRNA‑Thr/Group II intron‑encoding maturase |
? | AE015451 | 741509 = | NA (NA) | intergenic (+109/‑391) | PP_t12/PP_0635 | tRNA‑Thr/Group II intron‑encoding maturase | |||||
* | ? | AE015451 | 811732 = | 59 (1.020) | 5 (0.090) | 5/322 | NT | 8.3% | coding (520/918 nt) | PP_0698 | Transcriptional regulator, LysR family |
? | AE015451 | 811872 = | 55 (1.010) | coding (380/918 nt) | PP_0698 | Transcriptional regulator, LysR family | |||||
* | ? | AE015451 | 818587 = | 64 (1.110) | 5 (0.090) | 5/330 | NT | 7.5% | coding (89/516 nt) | PP_0704 | RNA polymerase sigma‑70 factor, ECF subfamily |
? | AE015451 | 818605 = | 61 (1.100) | coding (71/516 nt) | PP_0704 | RNA polymerase sigma‑70 factor, ECF subfamily | |||||
* | ? | AE015451 | 872677 = | 57 (0.990) | 3 (0.050) | 3/326 | NT | 5.9% | coding (485/1272 nt) | PP_0756 | conserved protein of unknown function |
? | AE015451 | 872768 = | 42 (0.760) | coding (394/1272 nt) | PP_0756 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 873680 | 61 (1.060) | 6 (0.110) | 5/324 | NT | 10.6% | coding (38/621 nt) | PP_0758 | conserved protein of unknown function |
? | AE015451 | = 873734 | 43 (0.790) | coding (92/621 nt) | PP_0758 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 938794 | 52 (0.900) | 3 (0.050) | 3/332 | NT | 6.2% | coding (6828/18933 nt) | PP_0806 | putative Surface adhesion protein |
? | AE015451 | = 939185 | 41 (0.730) | coding (6437/18933 nt) | PP_0806 | putative Surface adhesion protein | |||||
* | ? | AE015451 | 1015817 = | 47 (0.820) | 4 (0.070) | 4/324 | NT | 8.1% | coding (424/1431 nt) | PP_0875 | conserved protein of unknown function |
? | AE015451 | 1015933 = | 46 (0.840) | coding (308/1431 nt) | PP_0875 | conserved protein of unknown function | |||||
* | ? | AE015451 | 1030530 = | 59 (1.020) | 4 (0.070) | 4/322 | NT | 6.5% | coding (588/1353 nt) | PP_0887 | Sensor histidine kinase |
? | AE015451 | 1030592 = | 60 (1.110) | coding (650/1353 nt) | PP_0887 | Sensor histidine kinase | |||||
* | ? | AE015451 | = 1059497 | 69 (1.200) | 5 (0.100) | 5/306 | NT | 7.6% | coding (272/615 nt) | PP_0916 | Amino acid transporter LysE |
? | AE015451 | = 1059479 | 59 (1.140) | coding (290/615 nt) | PP_0916 | Amino acid transporter LysE | |||||
* | ? | AE015451 | 1194168 = | 53 (0.920) | 3 (0.060) | 3/318 | NT | 5.8% | coding (307/1653 nt) | uxpA | Lipoprotein UxpA |
? | AE015451 | 1194180 = | 49 (0.910) | coding (319/1653 nt) | uxpA | Lipoprotein UxpA | |||||
* | ? | AE015451 | = 1228859 | 65 (1.130) | 4 (0.070) | 4/324 | NT | 5.6% | coding (2039/4320 nt) | PP_1072 | Leucine‑rich repeat domain protein |
? | AE015451 | = 1228894 | 73 (1.340) | coding (2074/4320 nt) | PP_1072 | Leucine‑rich repeat domain protein | |||||
* | ? | AE015451 | 1246664 = | 52 (0.900) | 3 (0.060) | 3/302 | NT | 6.6% | intergenic (+65/‑306) | PP_1087/argG | Outer membrane protein, OmpA family/Argininosuccinate synthase |
? | AE015451 | 1246730 = | 39 (0.770) | intergenic (+131/‑240) | PP_1087/argG | Outer membrane protein, OmpA family/Argininosuccinate synthase | |||||
* | ? | AE015451 | = 1296790 | NA (NA) | 4 (0.070) | 4/328 | NT | NA | intergenic (‑543/‑23) | nhaA‑I/PP_1133 | Na(+)/H(+) antiporter NhaA 1/transposase |
? | AE015451 | = 1296814 | NA (NA) | coding (2/1329 nt) | PP_1133 | transposase | |||||
* | ? | AE015451 | 1298086 = | NA (NA) | 5 (0.090) | 5/318 | NT | NA | coding (1274/1329 nt) | PP_1133 | transposase |
? | AE015451 | 1298113 = | NA (NA) | coding (1301/1329 nt) | PP_1133 | transposase | |||||
* | ? | AE015451 | = 1510272 | 50 (0.870) | 3 (0.050) | 3/332 | NT | 5.7% | coding (1295/1818 nt) | PP_1325 | putative lipoprotein |
? | AE015451 | = 1510301 | 50 (0.890) | coding (1266/1818 nt) | PP_1325 | putative lipoprotein | |||||
* | ? | AE015451 | = 1516336 | 81 (1.410) | 5 (0.090) | 4/322 | NT | 6.7% | coding (1271/1749 nt) | ftsI | peptidoglycan DD transpeptidase |
? | AE015451 | = 1516459 | 64 (1.180) | coding (1394/1749 nt) | ftsI | peptidoglycan DD transpeptidase | |||||
* | ? | AE015451 | 1569240 = | 55 (0.950) | 3 (0.050) | 3/328 | NT | 5.5% | coding (51/1203 nt) | pcaF‑I | beta‑ketoadipyl‑CoA thiolase |
? | AE015451 | 1569284 = | 51 (0.920) | coding (95/1203 nt) | pcaF‑I | beta‑ketoadipyl‑CoA thiolase | |||||
* | ? | AE015451 | = 1595988 | 32 (0.560) | 4 (0.070) | 4/324 | NT | 10.5% | coding (1023/1335 nt) | dctD‑III | C4‑dicarboxylate transport transcriptional regulatory protein |
? | AE015451 | = 1596052 | 38 (0.700) | coding (959/1335 nt) | dctD‑III | C4‑dicarboxylate transport transcriptional regulatory protein | |||||
* | ? | AE015451 | 1656686 = | 43 (0.750) | 4 (0.070) | 4/324 | NT | 8.9% | coding (83/4527 nt) | PP_1449 | conserved exported protein of unknown function |
? | AE015451 | 1656725 = | 41 (0.750) | coding (44/4527 nt) | PP_1449 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | = 1714475 | 41 (0.710) | 3 (0.060) | 3/322 | NT | 6.9% | coding (319/870 nt) | PP_1509 | conserved protein of unknown function |
? | AE015451 | = 1714500 | 42 (0.770) | coding (344/870 nt) | PP_1509 | conserved protein of unknown function | |||||
* | ? | AE015451 | 1737987 = | 66 (1.140) | 23 (0.440) | 19/308 | NT | 30.0% | coding (32/348 nt) | yffB | putative glutathione‑dependent thiol reductase |
? | AE015451 | = 1777401 | 48 (0.920) | intergenic (+135/+157) | PP_5476/PP_1585 | conserved protein of unknown function/putative Antidote protein | |||||
* | ? | AE015451 | = 1842345 | 37 (0.640) | 3 (0.060) | 3/318 | NT | 7.7% | coding (2449/2754 nt) | gacS | Sensor protein GacS |
? | AE015451 | = 1842393 | 38 (0.710) | coding (2401/2754 nt) | gacS | Sensor protein GacS | |||||
* | ? | AE015451 | = 1886259 | 54 (0.940) | 5 (0.100) | 5/310 | NT | 9.2% | coding (926/1488 nt) | rmuC | DNA recombination limiting inversions protein |
? | AE015451 | = 1886243 | 50 (0.960) | coding (910/1488 nt) | rmuC | DNA recombination limiting inversions protein | |||||
* | ? | AE015451 | 1924902 = | 61 (1.060) | 3 (0.050) | 3/326 | NT | 5.5% | coding (800/837 nt) | PP_1725 | conserved protein of unknown function |
? | AE015451 | 1924933 = | 45 (0.820) | coding (769/837 nt) | PP_1725 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 1947111 | 59 (1.020) | 4 (0.070) | 4/324 | NT | 6.6% | coding (629/1185 nt) | PP_1748 | conserved protein of unknown function |
? | AE015451 | = 1947134 | 57 (1.040) | coding (606/1185 nt) | PP_1748 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 1962200 | 45 (0.780) | 5 (0.090) | 3/324 | NT | 10.1% | coding (463/1833 nt) | PP_1760 | ABC transporter, ATP‑binding protein |
? | AE015451 | = 1962206 | 46 (0.840) | coding (469/1833 nt) | PP_1760 | ABC transporter, ATP‑binding protein | |||||
* | ? | AE015451 | 2057883 = | 65 (1.130) | 5 (0.090) | 5/316 | NT | 7.7% | intergenic (+99/+29) | PP_1832/PP_1833 | putative Oxidase/conserved protein of unknown function |
? | AE015451 | 2057988 = | 59 (1.110) | coding (227/303 nt) | PP_1833 | conserved protein of unknown function | |||||
* | ? | AE015451 | 2064117 = | 47 (0.820) | 3 (0.060) | 3/310 | NT | 6.8% | intergenic (+21/+80) | PP_1840/PP_1841 | conserved protein of unknown function/Cytochrome c family protein |
? | AE015451 | 2064133 = | 40 (0.770) | intergenic (+37/+64) | PP_1840/PP_1841 | conserved protein of unknown function/Cytochrome c family protein | |||||
* | ? | AE015451 | = 2086080 | NA (NA) | 9 (0.160) | 9/328 | NT | NA | coding (195/1302 nt) | PP_1865 | transposase |
? | AE015451 | = 2086138 | NA (NA) | coding (253/1302 nt) | PP_1865 | transposase | |||||
* | ? | AE015451 | 2087730 = | 26 (0.450) | 4 (0.070) | 4/328 | NT | 9.9% | intergenic (+543/+375) | PP_1865/aroH | transposase/Phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
? | AE015451 | 2256224 = | 48 (0.870) | intergenic (+284/‑420) | asd/PP_1990 | Aspartate‑semialdehyde dehydrogenase/transposase | |||||
* | ? | AE015451 | 2101747 = | 56 (0.970) | 3 (0.060) | 3/306 | NT | 5.7% | coding (561/768 nt) | PP_1878 | conserved protein of unknown function |
? | AE015451 | 2101765 = | 50 (0.970) | coding (543/768 nt) | PP_1878 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 2130405 | 64 (1.110) | 4 (0.080) | 4/310 | NT | 6.6% | coding (1794/2496 nt) | fimD | Type 1 pili subunit FimD |
? | AE015451 | = 2130389 | 56 (1.070) | coding (1810/2496 nt) | fimD | Type 1 pili subunit FimD | |||||
* | ? | AE015451 | = 2256209 | 56 (0.970) | 4 (0.070) | 3/322 | NT | 9.1% | intergenic (+269/‑435) | asd/PP_1990 | Aspartate‑semialdehyde dehydrogenase/transposase |
? | AE015451 | = 4022295 | 27 (0.500) | coding (11/942 nt) | PP_3547 | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain | |||||
* | ? | AE015451 | 2262655 = | 50 (0.870) | 3 (0.050) | 3/330 | NT | 5.9% | coding (370/861 nt) | truA | tRNA pseudouridine (38‑40)synthase |
? | AE015451 | 2262708 = | 48 (0.860) | coding (423/861 nt) | truA | tRNA pseudouridine (38‑40)synthase | |||||
* | ? | AE015451 | 2274562 = | 28 (0.490) | 4 (0.070) | 4/332 | NT | 12.5% | coding (928/1119 nt) | PP_2005 | conserved exported protein of unknown function |
? | AE015451 | 2274588 = | 29 (0.520) | coding (902/1119 nt) | PP_2005 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | = 2283311 | 39 (0.680) | 3 (0.050) | 3/324 | NT | 8.1% | coding (504/978 nt) | PP_2011 | conserved exported protein of unknown function |
? | AE015451 | = 2283449 | 31 (0.570) | coding (366/978 nt) | PP_2011 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | 2310856 = | 56 (0.970) | 3 (0.050) | 3/324 | NT | 5.4% | coding (607/1311 nt) | PP_2033 | conserved protein of unknown function |
? | AE015451 | 2311137 = | 52 (0.950) | coding (888/1311 nt) | PP_2033 | conserved protein of unknown function | |||||
* | ? | AE015451 | 2315333 = | 58 (1.010) | 3 (0.050) | 3/332 | NT | 5.2% | coding (619/783 nt) | PP_2037 | putative Aldolase |
? | AE015451 | 2315365 = | 52 (0.930) | coding (587/783 nt) | PP_2037 | putative Aldolase | |||||
* | ? | AE015451 | 2320513 = | 50 (0.870) | 3 (0.050) | 3/326 | NT | 6.0% | coding (728/945 nt) | PP_2041 | Transcriptional regulator, LysR family |
? | AE015451 | 2320540 = | 47 (0.860) | coding (701/945 nt) | PP_2041 | Transcriptional regulator, LysR family | |||||
* | ? | AE015451 | 2343559 = | 37 (0.640) | 3 (0.060) | 3/320 | NT | 6.8% | coding (145/249 nt) | PP_2059 | UPF0337 protein PP_2059 |
? | AE015451 | 2343648 = | 47 (0.870) | coding (56/249 nt) | PP_2059 | UPF0337 protein PP_2059 | |||||
* | ? | AE015451 | = 2357793 | 48 (0.830) | 4 (0.070) | 3/328 | NT | 8.3% | coding (518/825 nt) | PP_2072 | Transcriptional regulator, AraC family |
? | AE015451 | = 2357821 | 42 (0.760) | coding (490/825 nt) | PP_2072 | Transcriptional regulator, AraC family | |||||
* | ? | AE015451 | = 2357939 | 53 (0.920) | 3 (0.050) | 3/324 | NT | 5.1% | coding (372/825 nt) | PP_2072 | Transcriptional regulator, AraC family |
? | AE015451 | = 2357967 | 61 (1.120) | coding (344/825 nt) | PP_2072 | Transcriptional regulator, AraC family | |||||
* | ? | AE015451 | = 2363456 | 42 (0.730) | 3 (0.050) | 3/332 | NT | 6.9% | coding (421/2724 nt) | PP_2076 | conserved protein of unknown function |
? | AE015451 | = 2363464 | 40 (0.710) | coding (413/2724 nt) | PP_2076 | conserved protein of unknown function | |||||
* | ? | AE015451 | 2382955 = | 40 (0.690) | 4 (0.070) | 4/326 | NT | 9.3% | coding (942/1671 nt) | PP_2091 | putative Serine/threonine‑protein kinase |
? | AE015451 | 2382997 = | 40 (0.730) | coding (900/1671 nt) | PP_2091 | putative Serine/threonine‑protein kinase | |||||
* | ? | AE015451 | = 2388103 | 27 (0.470) | 3 (0.050) | 3/326 | NT | 10.2% | coding (863/1023 nt) | pyrD | Dihydroorotate dehydrogenase (quinone) |
? | AE015451 | = 2388114 | 27 (0.490) | coding (874/1023 nt) | pyrD | Dihydroorotate dehydrogenase (quinone) | |||||
* | ? | AE015451 | = 2405347 | 44 (0.760) | 3 (0.050) | 3/324 | NT | 6.6% | coding (344/432 nt) | PP_2108 | conserved protein of unknown function |
? | AE015451 | = 2405351 | 43 (0.790) | coding (348/432 nt) | PP_2108 | conserved protein of unknown function | |||||
* | ? | AE015451 | 2436352 = | 0 (0.000) | 10 (0.190) | 5/320 | NT | 87.0% | coding (896/966 nt) | PP_2134 | transposase |
? | AE015451 | = 6038060 | 3 (0.060) | coding (921/966 nt) | PP_5290 | transposase | |||||
* | ? | AE015451 | 2456238 = | 60 (1.040) | 3 (0.050) | 3/324 | NT | 5.4% | coding (953/1464 nt) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase |
? | AE015451 | 2456321 = | 49 (0.900) | coding (1036/1464 nt) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase | |||||
* | ? | AE015451 | = 2459649 | 43 (0.750) | 4 (0.070) | 4/328 | NT | 8.6% | coding (644/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase |
? | AE015451 | = 2459657 | 44 (0.800) | coding (636/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase | |||||
* | ? | AE015451 | 2460050 = | 47 (0.820) | 3 (0.050) | 3/328 | NT | 6.5% | coding (243/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase |
? | AE015451 | 2460124 = | 41 (0.740) | coding (169/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase | |||||
* | ? | AE015451 | = 2472115 | 46 (0.800) | 10 (0.180) | 8/328 | NT | 19.2% | intergenic (+19/+130) | PP_2166/PP_2167 | Anti‑anti‑sigma factor/putative PhoD‑like phosphatase |
? | AE015451 | 2472313 = | 40 (0.720) | coding (1783/1851 nt) | PP_2167 | putative PhoD‑like phosphatase | |||||
* | ? | AE015451 | = 2475763 | 57 (0.990) | 3 (0.050) | 3/328 | NT | 5.1% | coding (606/1011 nt) | dusA | tRNA‑dihydrouridine synthase A |
? | AE015451 | = 2475772 | 56 (1.010) | coding (597/1011 nt) | dusA | tRNA‑dihydrouridine synthase A | |||||
* | ? | AE015451 | = 2487671 | 41 (0.710) | 3 (0.060) | 3/322 | NT | 6.6% | coding (43/516 nt) | PP_2182 | conserved protein of unknown function |
? | AE015451 | = 2487726 | 46 (0.850) | coding (98/516 nt) | PP_2182 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 2508922 | 36 (0.620) | 3 (0.060) | 3/310 | NT | 8.6% | coding (193/429 nt) | PP_2203 | conserved protein of unknown function |
? | AE015451 | = 2508906 | 31 (0.590) | coding (209/429 nt) | PP_2203 | conserved protein of unknown function | |||||
* | ? | AE015451 | 2526824 = | 55 (0.950) | 3 (0.060) | 3/322 | NT | 5.8% | coding (1068/1194 nt) | PP_2215 | acetyl‑CoA acetyltransferase |
? | AE015451 | 2526872 = | 45 (0.830) | coding (1116/1194 nt) | PP_2215 | acetyl‑CoA acetyltransferase | |||||
* | ? | AE015451 | 2566600 = | 55 (0.950) | 4 (0.070) | 4/320 | NT | 7.3% | coding (352/1932 nt) | pctB | Methyl‑accepting chemotaxis protein PctB |
? | AE015451 | 2566704 = | 50 (0.930) | coding (248/1932 nt) | pctB | Methyl‑accepting chemotaxis protein PctB | |||||
* | ? | AE015451 | = 2616442 | 66 (1.140) | 4 (0.070) | 3/326 | NT | 6.0% | coding (609/1641 nt) | PP_2288 | Phage tail fiber protein |
? | AE015451 | = 2616471 | 62 (1.130) | coding (638/1641 nt) | PP_2288 | Phage tail fiber protein | |||||
* | ? | AE015451 | 2641297 = | 48 (0.830) | 3 (0.060) | 3/306 | NT | 6.8% | coding (284/798 nt) | tatD | Mg‑dependent cytoplasmic DNase / RNase |
? | AE015451 | 2641315 = | 39 (0.760) | coding (266/798 nt) | tatD | Mg‑dependent cytoplasmic DNase / RNase | |||||
* | ? | AE015451 | = 2661972 | 53 (0.920) | 4 (0.070) | 4/324 | NT | 7.2% | coding (76/891 nt) | mmgF | 2‑methylisocitrate lyase |
? | AE015451 | = 2661979 | 53 (0.970) | coding (83/891 nt) | mmgF | 2‑methylisocitrate lyase | |||||
* | ? | AE015451 | = 2752995 | 41 (0.710) | 4 (0.070) | 4/328 | NT | 9.1% | coding (552/1215 nt) | czcB‑II | cobalt‑zinc‑cadmium resistance protein |
? | AE015451 | = 2753007 | 41 (0.740) | coding (564/1215 nt) | czcB‑II | cobalt‑zinc‑cadmium resistance protein | |||||
* | ? | AE015451 | 2774802 = | 45 (0.780) | 4 (0.070) | 4/326 | NT | 8.9% | coding (710/1353 nt) | PP_5521 | protein of unknown function |
? | AE015451 | 2774821 = | 39 (0.710) | coding (691/1353 nt) | PP_5521 | protein of unknown function | |||||
* | ? | AE015451 | = 2792287 | 41 (0.710) | 3 (0.050) | 3/326 | NT | 6.4% | coding (252/894 nt) | PP_2444 | Transcriptional regulator, LysR family |
? | AE015451 | = 2792374 | 48 (0.870) | coding (165/894 nt) | PP_2444 | Transcriptional regulator, LysR family | |||||
* | ? | AE015451 | = 2976758 | 60 (1.040) | 3 (0.050) | 3/324 | NT | 5.0% | coding (694/816 nt) | PP_2603 | conserved protein of unknown function |
? | AE015451 | = 2976807 | 57 (1.040) | coding (743/816 nt) | PP_2603 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 3012068 | 58 (1.010) | 3 (0.050) | 3/328 | NT | 5.0% | coding (1129/1614 nt) | bcsG | putative endoglucanase |
? | AE015451 | = 3012069 | 58 (1.050) | coding (1130/1614 nt) | bcsG | putative endoglucanase | |||||
* | ? | AE015451 | 3021021 = | 54 (0.940) | 5 (0.090) | 5/324 | NT | 8.8% | coding (1559/3519 nt) | PP_2638 | putative Cellulose synthase operon C protein |
? | AE015451 | 3021040 = | 52 (0.950) | coding (1578/3519 nt) | PP_2638 | putative Cellulose synthase operon C protein | |||||
* | ? | AE015451 | 3025474 = | 54 (0.940) | 4 (0.070) | 4/326 | NT | 8.0% | coding (1162/1800 nt) | PP_2641 | Iron‑sulfur cluster‑binding protein |
? | AE015451 | 3025501 = | 41 (0.750) | coding (1135/1800 nt) | PP_2641 | Iron‑sulfur cluster‑binding protein | |||||
* | ? | AE015451 | = 3082592 | 57 (0.990) | 3 (0.050) | 3/326 | NT | 5.2% | coding (1476/1551 nt) | PP_2692 | putative Transporter, BCCT family |
? | AE015451 | = 3082723 | 54 (0.980) | coding (1345/1551 nt) | PP_2692 | putative Transporter, BCCT family | |||||
* | ? | AE015451 | 3121594 = | 44 (0.760) | 3 (0.050) | 3/334 | NT | 6.7% | coding (269/423 nt) | PP_2738 | putative Transcriptional regulator |
? | AE015451 | 3121649 = | 41 (0.730) | coding (214/423 nt) | PP_2738 | putative Transcriptional regulator | |||||
* | ? | AE015451 | = 3126450 | 54 (0.940) | 3 (0.050) | 3/328 | NT | 5.5% | intergenic (‑181/+15) | PP_2743/PP_2744 | Acetyltransferase, GNAT family/Ribose‑phosphate pyrophosphokinase family protein |
? | AE015451 | = 3126455 | 52 (0.940) | intergenic (‑186/+10) | PP_2743/PP_2744 | Acetyltransferase, GNAT family/Ribose‑phosphate pyrophosphokinase family protein | |||||
* | ? | AE015451 | 3140058 = | 48 (0.830) | 6 (0.110) | 5/326 | NT | 13.4% | coding (612/1245 nt) | sfnB | sulfur acquisition oxidoreductase, SfnB family |
? | AE015451 | 3140103 = | 32 (0.580) | coding (657/1245 nt) | sfnB | sulfur acquisition oxidoreductase, SfnB family | |||||
* | ? | AE015451 | 3155135 = | 42 (0.730) | 4 (0.070) | 4/330 | NT | 9.4% | intergenic (+13/+24) | PP_2770/PP_2771 | conserved exported protein of unknown function/Sigma‑54 dependent transcriptional regulator |
? | AE015451 | 3155157 = | 37 (0.670) | intergenic (+35/+2) | PP_2770/PP_2771 | conserved exported protein of unknown function/Sigma‑54 dependent transcriptional regulator | |||||
* | ? | AE015451 | 3158934 = | 42 (0.730) | 5 (0.090) | 5/326 | NT | 11.0% | coding (953/2097 nt) | opuA | glycine betaine ABC transporter, ATPase/permease fusion protein |
? | AE015451 | 3158952 = | 41 (0.750) | coding (971/2097 nt) | opuA | glycine betaine ABC transporter, ATPase/permease fusion protein | |||||
* | ? | AE015451 | = 3289726 | 31 (0.540) | 3 (0.050) | 3/328 | NT | 8.7% | coding (758/1752 nt) | PP_2892 | conserved exported protein of unknown function |
? | AE015451 | = 3289733 | 33 (0.600) | coding (765/1752 nt) | PP_2892 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | 3296619 = | 41 (0.710) | 4 (0.070) | 4/328 | NT | 9.2% | coding (256/492 nt) | PP_2898 | conserved exported protein of unknown function |
? | AE015451 | 3296638 = | 40 (0.720) | coding (237/492 nt) | PP_2898 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | = 3325283 | 55 (0.950) | 3 (0.050) | 3/326 | NT | 5.5% | coding (36/1620 nt) | mqo‑III | malate:quinone oxidoreductase |
? | AE015451 | = 3325294 | 50 (0.910) | coding (47/1620 nt) | mqo‑III | malate:quinone oxidoreductase | |||||
* | ? | AE015451 | 3409928 = | 57 (0.990) | 6 (0.110) | 5/332 | NT | 9.3% | intergenic (‑494/‑42) | PP_3022/PP_3024 | Transcriptional regulator, AraC family/conserved protein of unknown function |
? | AE015451 | = 3450711 | 62 (1.110) | intergenic (‑125/+258) | PP_5558/PP_3069 | putative transcriptional xre family of phage origin/Outer membrane autotransporter | |||||
* | ? | AE015451 | = 3490603 | 59 (1.020) | 4 (0.070) | 4/324 | NT | 6.4% | coding (788/2637 nt) | clpV | Protein ClpV1 |
? | AE015451 | = 3490689 | 62 (1.140) | coding (702/2637 nt) | clpV | Protein ClpV1 | |||||
* | ? | AE015451 | = 3661518 | 53 (0.920) | 3 (0.060) | 3/314 | NT | 6.1% | coding (177/945 nt) | PP_3225 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
? | AE015451 | = 3661504 | 43 (0.810) | coding (191/945 nt) | PP_3225 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
* | ? | AE015451 | = 3779614 | 48 (0.830) | 4 (0.070) | 4/334 | NT | 7.6% | coding (65/1575 nt) | nikA | nickel ABC transporter periplasmic binding protein |
? | AE015451 | = 3779631 | 51 (0.910) | coding (82/1575 nt) | nikA | nickel ABC transporter periplasmic binding protein | |||||
* | ? | AE015451 | = 3782714 | 50 (0.870) | 3 (0.050) | 3/326 | NT | 6.5% | coding (651/846 nt) | nikC | nickel ABC transporter permease subunit |
? | AE015451 | = 3782954 | 38 (0.690) | coding (45/771 nt) | nikD | nickel ABC transporter ATP‑binding subunit | |||||
* | ? | AE015451 | 3794442 = | 40 (0.690) | 5 (0.090) | 5/326 | NT | 11.0% | coding (81/1191 nt) | PP_3355 | Beta‑ketothiolase |
? | AE015451 | 3794568 = | 43 (0.780) | intergenic (‑46/+2) | PP_3355/fcs | Beta‑ketothiolase/feruloyl‑CoA‑synthetase | |||||
* | ? | AE015451 | 3796487 = | 44 (0.760) | 3 (0.050) | 3/324 | NT | 6.7% | intergenic (‑34/+58) | fcs/vdh | feruloyl‑CoA‑synthetase/vanillin dehydrogenase |
? | AE015451 | 3796514 = | 42 (0.770) | intergenic (‑61/+31) | fcs/vdh | feruloyl‑CoA‑synthetase/vanillin dehydrogenase | |||||
* | ? | AE015451 | = 3837916 | 60 (1.040) | 4 (0.070) | 4/328 | NT | 6.5% | coding (1511/2673 nt) | PP_3388 | conserved protein of unknown function |
? | AE015451 | = 3837926 | 58 (1.050) | coding (1521/2673 nt) | PP_3388 | conserved protein of unknown function | |||||
* | ? | AE015451 | 3914680 = | 49 (0.850) | 3 (0.050) | 3/324 | NT | 6.3% | coding (107/702 nt) | PP_3454 | putative transcriptional regulatory protein |
? | AE015451 | 3914699 = | 43 (0.790) | coding (88/702 nt) | PP_3454 | putative transcriptional regulatory protein | |||||
* | ? | AE015451 | 3933799 = | 55 (0.950) | 3 (0.050) | 3/326 | NT | 5.8% | coding (1614/1911 nt) | PP_3467 | Sigma‑54 dependent transcriptional regulator |
? | AE015451 | 3933920 = | 45 (0.820) | coding (1493/1911 nt) | PP_3467 | Sigma‑54 dependent transcriptional regulator | |||||
* | ? | AE015451 | 3941236 = | 36 (0.620) | 4 (0.070) | 4/324 | NT | 10.4% | coding (322/387 nt) | PP_3476 | Type II secretion system protein G |
? | AE015451 | 3941263 = | 35 (0.640) | coding (295/387 nt) | PP_3476 | Type II secretion system protein G | |||||
* | ? | AE015451 | = 3951097 | 35 (0.610) | 10 (0.170) | 6/340 | NT | 23.0% | intergenic (‑61/+134) | PP_3486/PP_3487 | putative cytochrome c/conserved exported protein of unknown function |
? | AE015451 | = 3951157 | 32 (0.560) | intergenic (‑121/+74) | PP_3486/PP_3487 | putative cytochrome c/conserved exported protein of unknown function | |||||
* | ? | AE015451 | = 3954146 | 39 (0.680) | 3 (0.050) | 3/326 | NT | 7.8% | coding (377/1977 nt) | PP_5606 | conserved exported protein of unknown function with YVTN beta‑propeller repeat |
? | AE015451 | = 3954204 | 34 (0.620) | coding (319/1977 nt) | PP_5606 | conserved exported protein of unknown function with YVTN beta‑propeller repeat | |||||
* | ? | AE015451 | 3970595 = | NA (NA) | 7 (0.130) | 7/310 | NT | NA | coding (514/1536 nt) | PP_3501 | transposase |
? | AE015451 | 3970611 = | NA (NA) | coding (530/1536 nt) | PP_3501 | transposase | |||||
* | ? | AE015451 | = 3970610 | NA (NA) | 5 (0.100) | 5/310 | NT | NA | coding (529/1536 nt) | PP_3501 | transposase |
? | AE015451 | = 3970594 | NA (NA) | coding (513/1536 nt) | PP_3501 | transposase | |||||
* | ? | AE015451 | = 3971345 | NA (NA) | 6 (0.110) | 6/326 | NT | NA | coding (1264/1536 nt) | PP_3501 | transposase |
? | AE015451 | = 3971349 | NA (NA) | coding (1268/1536 nt) | PP_3501 | transposase | |||||
* | ? | AE015451 | = 3984515 | 48 (0.830) | 3 (0.050) | 3/326 | NT | 5.7% | coding (122/441 nt) | PP_3512 | conserved membrane protein of unknown function |
? | AE015451 | = 3984581 | 54 (0.980) | coding (56/441 nt) | PP_3512 | conserved membrane protein of unknown function | |||||
* | ? | AE015451 | = 4022305 | 30 (0.520) | 17 (0.310) | 13/322 | NT | 33.3% | coding (1/942 nt) | PP_3547 | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
? | AE015451 | 4022806 = | 40 (0.740) | intergenic (‑501/+167) | PP_3547/emrB | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit | |||||
* | ? | AE015451 | = 4022445 | 32 (0.560) | 7 (0.130) | 7/322 | NT | 20.9% | intergenic (‑140/+528) | PP_3547/emrB | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit |
? | AE015451 | 4022664 = | 23 (0.420) | intergenic (‑359/+309) | PP_3547/emrB | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit | |||||
* | ? | AE015451 | = 4053475 | 49 (0.850) | 3 (0.050) | 3/326 | NT | 5.9% | coding (49/1320 nt) | PP_3573 | putative Monooxygenase |
? | AE015451 | = 4053476 | 49 (0.890) | coding (50/1320 nt) | PP_3573 | putative Monooxygenase | |||||
* | ? | AE015451 | = 4123700 | 49 (0.850) | 3 (0.050) | 3/326 | NT | 5.4% | coding (175/1746 nt) | PP_3628 | Choline/carnitine/betaine transporter family protein |
? | AE015451 | = 4123796 | 58 (1.060) | coding (271/1746 nt) | PP_3628 | Choline/carnitine/betaine transporter family protein | |||||
* | ? | AE015451 | 4123926 = | 44 (0.760) | 4 (0.070) | 4/320 | NT | 8.8% | coding (401/1746 nt) | PP_3628 | Choline/carnitine/betaine transporter family protein |
? | AE015451 | 4123974 = | 42 (0.780) | coding (449/1746 nt) | PP_3628 | Choline/carnitine/betaine transporter family protein | |||||
* | ? | AE015451 | 4133059 = | 40 (0.690) | 4 (0.070) | 4/326 | NT | 9.4% | coding (102/1206 nt) | PP_3636 | putative Sulfonate ABC transporter, periplasmic sulfonate‑binding protein |
? | AE015451 | 4133114 = | 39 (0.710) | coding (47/1206 nt) | PP_3636 | putative Sulfonate ABC transporter, periplasmic sulfonate‑binding protein | |||||
* | ? | AE015451 | = 4138582 | 53 (0.920) | 3 (0.050) | 3/328 | NT | 5.4% | coding (81/486 nt) | PP_3643 | putative Oxidoreductase |
? | AE015451 | = 4138588 | 55 (0.990) | coding (87/486 nt) | PP_3643 | putative Oxidoreductase | |||||
* | ? | AE015451 | = 4160438 | 41 (0.710) | 3 (0.050) | 3/326 | NT | 6.7% | coding (1178/1374 nt) | PP_3662 | conserved protein of unknown function |
? | AE015451 | = 4160588 | 44 (0.800) | coding (1328/1374 nt) | PP_3662 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 4192478 | 82 (1.420) | 5 (0.100) | 5/302 | NT | 6.5% | intergenic (+84/‑565) | PP_5613/PP_5614 | protein of unknown function/protein of unknown function |
? | AE015451 | = 4192458 | 72 (1.410) | intergenic (+64/‑585) | PP_5613/PP_5614 | protein of unknown function/protein of unknown function | |||||
* | ? | AE015451 | 4244793 = | 45 (0.780) | 7 (0.130) | 6/328 | NT | 13.7% | coding (228/1191 nt) | aruH | Arginine‑‑pyruvate transaminase AruH |
? | AE015451 | 4244808 = | 45 (0.810) | coding (213/1191 nt) | aruH | Arginine‑‑pyruvate transaminase AruH | |||||
* | ? | AE015451 | 4261045 = | 57 (0.990) | 4 (0.070) | 4/324 | NT | 6.7% | coding (1717/2460 nt) | PP_3734 | putative ABC transporter, permease protein |
? | AE015451 | 4261097 = | 58 (1.060) | coding (1665/2460 nt) | PP_3734 | putative ABC transporter, permease protein | |||||
* | ? | AE015451 | = 4279883 | 40 (0.690) | 4 (0.070) | 3/324 | NT | 8.9% | coding (1083/1434 nt) | PP_3750 | Transcriptional regulator, GntR family |
? | AE015451 | = 4280008 | 44 (0.810) | coding (1208/1434 nt) | PP_3750 | Transcriptional regulator, GntR family | |||||
* | ? | AE015451 | = 4290853 | 43 (0.750) | 4 (0.070) | 4/324 | NT | 8.9% | coding (1734/3468 nt) | PP_3761 | Sensor histidine kinase/response regulator |
? | AE015451 | = 4290920 | 41 (0.750) | coding (1667/3468 nt) | PP_3761 | Sensor histidine kinase/response regulator | |||||
* | ? | AE015451 | = 4332228 | 33 (0.570) | 4 (0.070) | 3/324 | NT | 11.4% | coding (32/864 nt) | PP_3804 | conserved exported protein of unknown function |
? | AE015451 | = 4332298 | 31 (0.570) | coding (102/864 nt) | PP_3804 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | 4353286 = | 41 (0.710) | 5 (0.090) | 5/322 | NT | 12.4% | coding (412/1086 nt) | yrpB | 2‑nitropropane dioxygenase |
? | AE015451 | 4353307 = | 32 (0.590) | coding (433/1086 nt) | yrpB | 2‑nitropropane dioxygenase | |||||
* | ? | AE015451 | 4371608 = | 59 (1.020) | 17 (0.480) | 15/208 | NT | 30.9% | intergenic (‑193/‑1379) | PP_5636/PP_3849 | protein of unknown function/putative calcium‑binding protein, hemolysin‑type |
? | AE015451 | = 4427498 | 40 (1.140) | intergenic (+82/+20) | PP_3920/PP_t61 | putative Phage integrase/tRNA‑Cys | |||||
* | ? | AE015451 | 4417589 = | 65 (1.130) | 5 (0.090) | 5/314 | NT | 7.7% | coding (482/552 nt) | PP_3905 | Transcriptional regulator, LuxR family |
? | AE015451 | 4417603 = | 61 (1.150) | coding (496/552 nt) | PP_3905 | Transcriptional regulator, LuxR family | |||||
* | ? | AE015451 | = 4444045 | 54 (0.940) | 4 (0.070) | 4/336 | NT | 7.5% | intergenic (‑64/+145) | nicT/nicF | Putative metabolite transport protein NicT/maleamate amidohydrolase |
? | AE015451 | = 4444068 | 46 (0.810) | intergenic (‑87/+122) | nicT/nicF | Putative metabolite transport protein NicT/maleamate amidohydrolase | |||||
* | ? | AE015451 | = 4526692 | 59 (1.020) | 4 (0.070) | 4/332 | NT | 6.0% | coding (502/627 nt) | PP_4015 | HflD‑like high frequency lysogenization protein |
? | AE015451 | = 4526735 | 68 (1.220) | coding (545/627 nt) | PP_4015 | HflD‑like high frequency lysogenization protein | |||||
* | ? | AE015451 | 4578272 = | 58 (1.010) | 3 (0.050) | 3/328 | NT | 5.5% | coding (1839/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme |
? | AE015451 | 4578296 = | 47 (0.850) | coding (1815/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme | |||||
* | ? | AE015451 | = 4593859 | 29 (0.500) | 3 (0.060) | 3/294 | NT | 9.5% | intergenic (+165/+134) | mccA/PP_4068 | methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Transcriptional regulator, Cro/CI family |
? | AE015451 | = 4593904 | 32 (0.650) | intergenic (+210/+89) | mccA/PP_4068 | methylcrotonyl‑CoA carboxylase biotin‑containing subunit alpha/Transcriptional regulator, Cro/CI family | |||||
* | ? | AE015451 | 4604194 = | 51 (0.880) | 5 (0.090) | 5/322 | NT | 10.1% | coding (24/411 nt) | PP_4076 | conserved protein of unknown function |
? | AE015451 | 4604216 = | 41 (0.760) | coding (46/411 nt) | PP_4076 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 4653677 | 75 (1.300) | 4 (0.070) | 3/322 | NT | 5.4% | coding (155/1326 nt) | aceA | isocitrate lyase |
? | AE015451 | = 4653754 | 70 (1.290) | coding (232/1326 nt) | aceA | isocitrate lyase | |||||
* | ? | AE015451 | = 4667670 | 41 (0.710) | 6 (0.110) | 6/328 | NT | 13.1% | coding (1436/1854 nt) | nuoL | NADH:ubiquinone oxidoreductase, membrane subunit L |
? | AE015451 | = 4667687 | 40 (0.720) | coding (1453/1854 nt) | nuoL | NADH:ubiquinone oxidoreductase, membrane subunit L | |||||
* | ? | AE015451 | = 4681791 | 45 (0.780) | 5 (0.090) | 4/324 | NT | 10.2% | coding (81/1431 nt) | mltD | Membrane‑bound lytic murein transglycosylase D |
? | AE015451 | = 4681800 | 45 (0.820) | coding (90/1431 nt) | mltD | Membrane‑bound lytic murein transglycosylase D | |||||
* | ? | AE015451 | = 4703829 | 46 (0.800) | 5 (0.090) | 5/328 | NT | 10.6% | coding (1335/1695 nt) | kdpA | potassium‑transporting ATPase A chain |
? | AE015451 | = 4703830 | 40 (0.720) | coding (1334/1695 nt) | kdpA | potassium‑transporting ATPase A chain | |||||
* | ? | AE015451 | 4743577 = | 75 (1.300) | 8 (0.150) | 7/326 | NT | 10.1% | coding (415/1593 nt) | PP_4197 | Transcriptional regulator, GntR family |
? | AE015451 | 4743666 = | 71 (1.290) | coding (326/1593 nt) | PP_4197 | Transcriptional regulator, GntR family | |||||
* | ? | AE015451 | = 4781905 | 54 (0.940) | 5 (0.090) | 5/324 | NT | 9.3% | coding (5409/7887 nt) | pvdJ | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
? | AE015451 | = 4781937 | 46 (0.840) | coding (5377/7887 nt) | pvdJ | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) | |||||
* | ? | AE015451 | = 4791764 | 40 (0.690) | 3 (0.060) | 3/316 | NT | 7.6% | coding (2076/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) |
? | AE015451 | = 4791873 | 36 (0.680) | coding (1967/6525 nt) | pvdI | non‑ribosomal peptide synthetase (subunit of ferribactin synthase) | |||||
* | ? | AE015451 | 4808173 = | 0 (0.000) | 15 (0.260) | 10/338 | NT | 39.5% | intergenic (‑282/‑273) | PP_4234/dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
? | AE015451 | = 4945372 | 46 (0.810) | intergenic (+732/+66) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein | |||||
* | ? | AE015451 | = 4808179 | 0 (0.000) | 15 (0.280) | 11/318 | NT | 42.9% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
? | AE015451 | 5988765 = | 40 (0.750) | intergenic (+59/‑487) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
* | ? | AE015451 | = 4808728 | 26 (0.450) | 4 (0.080) | 4/314 | NT | 14.6% | coding (283/1716 nt) | dsbD‑II | thiol/disulfide interchange protein 2 |
? | AE015451 | = 4808714 | 23 (0.430) | coding (269/1716 nt) | dsbD‑II | thiol/disulfide interchange protein 2 | |||||
* | ? | AE015451 | = 4832748 | 66 (1.140) | 4 (0.070) | 4/330 | NT | 6.0% | coding (443/1014 nt) | pvdY | hydroxyproline acetylase |
? | AE015451 | = 4832762 | 62 (1.110) | coding (429/1014 nt) | pvdY | hydroxyproline acetylase | |||||
* | ? | AE015451 | 4833372 = | 71 (1.230) | 5 (0.090) | 5/324 | NT | 7.7% | coding (683/801 nt) | PP_4246 | Periplasmic binding protein |
? | AE015451 | 4833436 = | 52 (0.950) | coding (619/801 nt) | PP_4246 | Periplasmic binding protein | |||||
* | ? | AE015451 | 4848146 = | 44 (0.760) | 3 (0.050) | 3/328 | NT | 7.0% | coding (235/684 nt) | PP_4263 | putative membrane‑bounded cytochrome biogenesis cycZ‑like domain, copper tolerance protein |
? | AE015451 | 4848162 = | 38 (0.690) | coding (251/684 nt) | PP_4263 | putative membrane‑bounded cytochrome biogenesis cycZ‑like domain, copper tolerance protein | |||||
* | ? | AE015451 | = 4883266 | 56 (0.970) | 6 (0.110) | 6/326 | NT | 9.8% | intergenic (+68/‑286) | PP_4291/PP_4293 | conserved exported protein of unknown function/conserved exported protein of unknown function |
? | AE015451 | = 4883277 | 57 (1.040) | intergenic (+79/‑275) | PP_4291/PP_4293 | conserved exported protein of unknown function/conserved exported protein of unknown function | |||||
* | ? | AE015451 | 4884710 = | 58 (1.010) | 3 (0.050) | 3/328 | NT | 5.8% | coding (668/915 nt) | yedI | conserved inner membrane protein |
? | AE015451 | 4884763 = | 42 (0.760) | coding (615/915 nt) | yedI | conserved inner membrane protein | |||||
* | ? | AE015451 | = 4902861 | 51 (0.880) | 6 (0.110) | 4/320 | NT | 11.1% | intergenic (+47/+72) | PP_4310/PP_4311 | putative Hydantoin racemase/putative D‑amino acid dehydrogenase 2 small subunit |
? | AE015451 | = 4902896 | 48 (0.890) | intergenic (+82/+37) | PP_4310/PP_4311 | putative Hydantoin racemase/putative D‑amino acid dehydrogenase 2 small subunit | |||||
* | ? | AE015451 | = 4945197 | 47 (0.820) | 16 (0.290) | 15/328 | NT | 25.0% | intergenic (+557/+241) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
? | AE015451 | 4945389 = | 51 (0.920) | intergenic (+749/+49) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein | |||||
* | ? | AE015451 | = 4945198 | 49 (0.850) | 4 (0.070) | 4/332 | NT | 8.0% | intergenic (+558/+240) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
? | AE015451 | 4945577 = | 45 (0.800) | coding (1004/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein | |||||
* | ? | AE015451 | = 4945209 | 48 (0.830) | 7 (0.130) | 6/324 | NT | 13.1% | intergenic (+569/+229) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
? | AE015451 | 4945455 = | 47 (0.860) | coding (1126/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein | |||||
* | ? | AE015451 | = 4953742 | 59 (1.020) | 3 (0.060) | 3/320 | NT | 5.1% | coding (690/1692 nt) | PP_4363 | Sensor histidine kinase/response regulator |
? | AE015451 | = 4953780 | 57 (1.060) | coding (652/1692 nt) | PP_4363 | Sensor histidine kinase/response regulator | |||||
* | ? | AE015451 | = 4961181 | 45 (0.780) | 4 (0.070) | 3/326 | NT | 8.7% | coding (1257/1356 nt) | atoC | two component system AtoC DNA‑binding transcriptional activator |
? | AE015451 | = 4961188 | 41 (0.750) | coding (1250/1356 nt) | atoC | two component system AtoC DNA‑binding transcriptional activator | |||||
* | ? | AE015451 | = 5036488 | NA (NA) | 3 (0.050) | 3/328 | NT | NA | coding (296/321 nt) | PP_4441 | transposase |
? | AE015451 | = 5036555 | NA (NA) | coding (46/336 nt) | PP_4442 | transposase | |||||
* | ? | AE015451 | 5036643 = | NA (NA) | 3 (0.050) | 3/324 | NT | NA | coding (134/336 nt) | PP_4442 | transposase |
? | AE015451 | 5036738 = | NA (NA) | coding (229/336 nt) | PP_4442 | transposase | |||||
* | ? | AE015451 | 5039357 = | 53 (0.920) | 5 (0.090) | 5/328 | NT | 9.6% | coding (658/759 nt) | PP_4445 | transposase |
? | AE015451 | 5039381 = | 43 (0.780) | coding (682/759 nt) | PP_4445 | transposase | |||||
* | ? | AE015451 | = 5101071 | 42 (0.730) | 4 (0.070) | 4/334 | NT | 8.9% | coding (556/1560 nt) | phhR | sigma‑54 dependent transcriptional regulator |
? | AE015451 | = 5101092 | 41 (0.730) | coding (535/1560 nt) | phhR | sigma‑54 dependent transcriptional regulator | |||||
* | ? | AE015451 | = 5138413 | 38 (0.660) | 3 (0.060) | 3/322 | NT | 8.0% | coding (600/963 nt) | PP_4523 | putative Agmatinase |
? | AE015451 | = 5138512 | 33 (0.610) | coding (699/963 nt) | PP_4523 | putative Agmatinase | |||||
* | ? | AE015451 | 5160627 = | 59 (1.020) | 3 (0.050) | 3/330 | NT | 5.0% | coding (428/1212 nt) | PP_4543 | conserved protein of unknown function |
? | AE015451 | 5160650 = | 57 (1.020) | coding (405/1212 nt) | PP_4543 | conserved protein of unknown function | |||||
* | ? | AE015451 | 5188554 = | 57 (0.990) | 3 (0.050) | 3/324 | NT | 5.6% | coding (343/882 nt) | PP_4568 | putative metabolite efflux pump |
? | AE015451 | 5188590 = | 47 (0.860) | coding (307/882 nt) | PP_4568 | putative metabolite efflux pump | |||||
* | ? | AE015451 | = 5269311 | 58 (1.010) | 4 (0.080) | 4/314 | NT | 6.9% | coding (1028/1371 nt) | radA | DNA repair enzyme |
? | AE015451 | = 5269297 | 55 (1.040) | coding (1042/1371 nt) | radA | DNA repair enzyme | |||||
* | ? | AE015451 | = 5297727 | 48 (0.830) | 3 (0.060) | 3/322 | NT | 5.4% | coding (199/567 nt) | PP_4671 | conserved exported protein of unknown function |
? | AE015451 | = 5297808 | 59 (1.090) | coding (118/567 nt) | PP_4671 | conserved exported protein of unknown function | |||||
* | ? | AE015451 | = 5325153 | 62 (1.080) | 3 (0.060) | 3/314 | NT | 5.0% | coding (66/279 nt) | PP_4685 | conserved protein of unknown function |
? | AE015451 | = 5325139 | 57 (1.080) | coding (52/279 nt) | PP_4685 | conserved protein of unknown function | |||||
* | ? | AE015451 | 5336714 = | 42 (0.730) | 6 (0.110) | 6/334 | NT | 12.6% | coding (164/1443 nt) | PP_4696 | Nitrogen regulation protein NR(I) |
? | AE015451 | 5336732 = | 42 (0.750) | coding (182/1443 nt) | PP_4696 | Nitrogen regulation protein NR(I) | |||||
* | ? | AE015451 | = 5434211 | 37 (0.640) | 3 (0.050) | 3/330 | NT | 7.0% | coding (1053/2529 nt) | hrpB | ATP‑dependent helicase HrpB |
? | AE015451 | = 5434277 | 44 (0.790) | coding (987/2529 nt) | hrpB | ATP‑dependent helicase HrpB | |||||
* | ? | AE015451 | 5452441 = | 57 (0.990) | 3 (0.050) | 3/330 | NT | 5.2% | coding (972/1518 nt) | lnt | Apolipoprotein N‑acyltransferase |
? | AE015451 | 5452490 = | 55 (0.990) | coding (1021/1518 nt) | lnt | Apolipoprotein N‑acyltransferase | |||||
* | ? | AE015451 | = 5459559 | 10 (0.170) | 3 (0.050) | 3/324 | NT | 25.6% | intergenic (+17/‑23) | PP_4795/holA | putative Lipoprotein/DNA polymerase III, delta subunit |
? | AE015451 | = 5459561 | 8 (0.150) | intergenic (+19/‑21) | PP_4795/holA | putative Lipoprotein/DNA polymerase III, delta subunit | |||||
* | ? | AE015451 | = 5502917 | 16 (0.280) | 4 (0.070) | 4/322 | NT | 19.5% | coding (365/432 nt) | PP_4837 | conserved protein of unknown function |
? | AE015451 | = 5502938 | 18 (0.330) | coding (386/432 nt) | PP_4837 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 5509910 | 46 (0.800) | 5 (0.100) | 5/302 | NT | 10.8% | coding (109/1488 nt) | urtB | putative Urea ABC transporter |
? | AE015451 | = 5509890 | 42 (0.830) | coding (89/1488 nt) | urtB | putative Urea ABC transporter | |||||
* | ? | AE015451 | 5545321 = | NA (NA) | 62 (1.090) | 52/338 | NT | 75.8% | intergenic (‑461/+416) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine‑2'‑O‑)‑methyltransferase RlmB |
? | AE015451 | = 5621245 | 20 (0.350) | coding (19/774 nt) | PP_4939 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 5545666 | NA (NA) | 34 (0.600) | 29/336 | NT | 63.4% | intergenic (‑806/+71) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine‑2'‑O‑)‑methyltransferase RlmB |
? | AE015451 | 5621244 = | 20 (0.350) | coding (20/774 nt) | PP_4939 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 5559582 | 63 (1.090) | 5 (0.100) | 5/302 | NT | 8.4% | coding (915/1188 nt) | hisZ | ATP phosphoribosyltransferase regulatory subunit |
? | AE015451 | = 5559562 | 54 (1.060) | coding (935/1188 nt) | hisZ | ATP phosphoribosyltransferase regulatory subunit | |||||
* | ? | AE015451 | = 5567006 | 52 (0.900) | 4 (0.070) | 4/328 | NT | 7.9% | coding (480/1899 nt) | mutL | DNA mismatch repair protein MutL |
? | AE015451 | = 5567149 | 44 (0.800) | coding (337/1899 nt) | mutL | DNA mismatch repair protein MutL | |||||
* | ? | AE015451 | = 5609848 | 43 (0.750) | 4 (0.070) | 4/328 | NT | 9.8% | coding (667/906 nt) | PP_4929 | Transcriptional regulator, LysR family |
? | AE015451 | = 5609893 | 32 (0.580) | coding (622/906 nt) | PP_4929 | Transcriptional regulator, LysR family | |||||
* | ? | AE015451 | 5611082 = | 49 (0.850) | 3 (0.050) | 3/328 | NT | 6.1% | coding (76/1176 nt) | PP_4931 | conserved protein of unknown function |
? | AE015451 | 5611134 = | 46 (0.830) | coding (128/1176 nt) | PP_4931 | conserved protein of unknown function | |||||
* | ? | AE015451 | 5647932 = | 56 (0.970) | 3 (0.050) | 3/326 | NT | 5.8% | coding (192/453 nt) | elaA | putative acyltransferase |
? | AE015451 | 5648003 = | 44 (0.800) | coding (263/453 nt) | elaA | putative acyltransferase | |||||
* | ? | AE015451 | = 5655785 | 56 (0.970) | 3 (0.050) | 3/326 | NT | 5.5% | coding (1910/1998 nt) | tktA | transketolase A |
? | AE015451 | = 5655842 | 50 (0.910) | coding (1853/1998 nt) | tktA | transketolase A | |||||
* | ? | AE015451 | 5728252 = | 55 (0.950) | 3 (0.050) | 3/326 | NT | 5.7% | coding (386/1680 nt) | opgG | Glucans biosynthesis protein G |
? | AE015451 | 5728289 = | 47 (0.860) | coding (349/1680 nt) | opgG | Glucans biosynthesis protein G | |||||
* | ? | AE015451 | = 5790883 | 46 (0.800) | 4 (0.070) | 4/326 | NT | 8.3% | coding (835/1065 nt) | hemE | Uroporphyrinogen decarboxylase |
? | AE015451 | = 5790885 | 44 (0.800) | coding (833/1065 nt) | hemE | Uroporphyrinogen decarboxylase | |||||
* | ? | AE015451 | = 5803660 | 54 (0.940) | 3 (0.050) | 3/326 | NT | 5.7% | coding (138/1017 nt) | PP_5081 | Type IV pili biogenesis protein |
? | AE015451 | = 5803676 | 47 (0.860) | coding (122/1017 nt) | PP_5081 | Type IV pili biogenesis protein | |||||
* | ? | AE015451 | 5825709 = | 55 (0.950) | 3 (0.050) | 3/326 | NT | 5.0% | coding (586/813 nt) | thiG | thiazole synthase |
? | AE015451 | 5825778 = | 61 (1.110) | coding (517/813 nt) | thiG | thiazole synthase | |||||
* | ? | AE015451 | 5839023 = | 46 (0.800) | 5 (0.090) | 5/328 | NT | 9.6% | coding (393/993 nt) | yheT | putative hydrolase |
? | AE015451 | 5839105 = | 50 (0.900) | coding (475/993 nt) | yheT | putative hydrolase | |||||
* | ? | AE015451 | = 5870289 | 46 (0.800) | 4 (0.080) | 4/284 | NT | 8.8% | intergenic (+50/+84) | PP_5144/ptsP | conserved protein of unknown function/phosphoenolpyruvate‑dependent regulator (with NPR and NTR proteins) |
? | AE015451 | = 5870324 | 45 (0.940) | intergenic (+85/+49) | PP_5144/ptsP | conserved protein of unknown function/phosphoenolpyruvate‑dependent regulator (with NPR and NTR proteins) | |||||
* | ? | AE015451 | = 5892003 | 61 (1.060) | 4 (0.070) | 4/318 | NT | 6.6% | coding (621/831 nt) | PP_5166 | Sigma‑54 dependent transcriptional regulator |
? | AE015451 | = 5892260 | 57 (1.060) | coding (364/831 nt) | PP_5166 | Sigma‑54 dependent transcriptional regulator | |||||
* | ? | AE015451 | = 5927073 | 44 (0.760) | 3 (0.050) | 3/326 | NT | 6.5% | coding (822/1623 nt) | PP_5195 | putative Iron ABC transporter, permease protein |
? | AE015451 | = 5927083 | 44 (0.800) | coding (812/1623 nt) | PP_5195 | putative Iron ABC transporter, permease protein | |||||
* | ? | AE015451 | = 5969729 | 46 (0.800) | 5 (0.090) | 5/318 | NT | 10.2% | coding (1565/2124 nt) | PP_5236 | conserved protein of unknown function |
? | AE015451 | = 5969738 | 45 (0.840) | coding (1556/2124 nt) | PP_5236 | conserved protein of unknown function | |||||
* | ? | AE015451 | = 5988668 | 45 (0.780) | 8 (0.140) | 7/328 | NT | 17.7% | coding (1750/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
? | AE015451 | 5988956 = | 31 (0.560) | intergenic (+250/‑296) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
* | ? | AE015451 | = 5988757 | 40 (0.690) | 21 (0.380) | 19/326 | NT | 39.6% | intergenic (+51/‑495) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
? | AE015451 | 5988979 = | 26 (0.470) | intergenic (+273/‑273) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
* | ? | AE015451 | = 5988759 | 40 (0.690) | 4 (0.070) | 4/328 | NT | 10.5% | intergenic (+53/‑493) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
? | AE015451 | 5988951 = | 30 (0.540) | intergenic (+245/‑301) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
* | ? | AE015451 | = 5988771 | 40 (0.690) | 9 (0.160) | 9/326 | NT | 20.9% | intergenic (+65/‑481) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
? | AE015451 | 5988963 = | 30 (0.550) | intergenic (+257/‑289) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
* | ? | AE015451 | 5999458 = | 32 (0.560) | 4 (0.070) | 4/324 | NT | 10.6% | intergenic (‑313/‑8) | ycaC‑IV/PP_5256 | putative hydrolase/Cyclic nucleotide‑binding protein |
? | AE015451 | 5999593 = | 37 (0.680) | coding (128/1428 nt) | PP_5256 | Cyclic nucleotide‑binding protein | |||||
* | ? | AE015451 | 6070767 = | 76 (1.320) | 4 (0.070) | 4/322 | NT | 5.2% | intergenic (‑123/+40) | PP_5324/phoU | Response regulator/phosphate transport‑associated protein |
? | AE015451 | 6070789 = | 73 (1.350) | intergenic (‑145/+18) | PP_5324/phoU | Response regulator/phosphate transport‑associated protein | |||||
* | ? | AE015451 | 6071413 = | 83 (1.440) | 6 (0.110) | 4/322 | NT | 7.5% | coding (165/771 nt) | phoU | phosphate transport‑associated protein |
? | AE015451 | 6071506 = | 70 (1.290) | coding (72/771 nt) | phoU | phosphate transport‑associated protein | |||||
* | ? | AE015451 | = 6077844 | 60 (1.040) | 7 (0.140) | 7/294 | NT | 11.0% | intergenic (‑146/+92) | PP_5329/PP_5330 | putative phosphate ABC transporter, periplasmic phosphate‑binding protein/Major facilitator family transporter |
? | AE015451 | = 6077896 | 62 (1.250) | intergenic (‑198/+40) | PP_5329/PP_5330 | putative phosphate ABC transporter, periplasmic phosphate‑binding protein/Major facilitator family transporter | |||||
* | ? | AE015451 | = 6115123 | 54 (0.940) | 4 (0.070) | 4/320 | NT | 7.3% | coding (564/1287 nt) | PP_5365 | putative fatty acid methyltransferase |
? | AE015451 | = 6115151 | 51 (0.950) | coding (536/1287 nt) | PP_5365 | putative fatty acid methyltransferase |