mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 195,559 | C→A | 15.5% | T355T (ACC→ACA) | PP_0168 → | putative surface adhesion protein |
| RA | 195,628 | C→T | 12.3% | D378D (GAC→GAT) | PP_0168 → | putative surface adhesion protein |
| RA | 195,629 | A→G | 20.4% | T379A (ACC→GCC) | PP_0168 → | putative surface adhesion protein |
| RA | 195,634 | C→T | 19.0% | T380T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 195,724 | A→G | 11.2% | V410V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
| RA | 195,732 | A→C | 20.0% | N413T (AAC→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 195,826 | C→T | 8.2% | G444G (GGC→GGT) | PP_0168 → | putative surface adhesion protein |
| RA | 195,852 | G→A | 13.3% | S453N (AGC→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,027 | T→C | 11.5% | T511T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,234 | T→C | 9.3% | T580T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,285 | T→C | 15.4% | T597T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,366 | C→G | 13.2% | A624A (GCC→GCG) | PP_0168 → | putative surface adhesion protein |
| RA | 196,438 | T→C | 15.2% | S648S (AGT→AGC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,495 | G→C | 20.6% | T667T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,579 | G→A | 42.8% | V695V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
| RA | 196,705 | G→C | 16.0% | A737A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
| RA | 196,879 | G→A | 23.0% | V795V (GTG→GTA) | PP_0168 → | putative surface adhesion protein |
| RA | 196,885 | C→T | 21.3% | T797T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 196,951 | C→G | 8.3% | T819T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 196,972 | G→A | 9.4% | K826K (AAG→AAA) | PP_0168 → | putative surface adhesion protein |
| RA | 196,990 | T→C | 11.6% | D832D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,032 | C→T | 9.5% | T846T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 197,089 | T→C | 21.5% | N865N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,128 | T→C | 11.0% | D878D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,129 | G→A | 7.6% | A879T (GCC→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,134 | C→T | 6.5% | T880T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 197,179 | A→G | 10.8% | V895V (GTA→GTG) | PP_0168 → | putative surface adhesion protein |
| RA | 197,185 | C→T | 8.7% | T897T (ACC→ACT) | PP_0168 → | putative surface adhesion protein |
| RA | 197,496 | T→C | 21.3% | I1001T (ATC→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,590 | T→C | 14.6% | D1032D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,632 | T→C | 33.6% | T1046T (ACT→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,695 | G→C | 18.9% | T1067T (ACG→ACC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,866 | G→C | 20.3% | A1124A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,869 | T→C | 23.2% | G1125G (GGT→GGC) | PP_0168 → | putative surface adhesion protein |
| RA | 197,872 | A→G | 20.6% | K1126K (AAA→AAG) | PP_0168 → | putative surface adhesion protein |
| RA | 199,318 | T→G | 11.5% | T1608T (ACT→ACG) | PP_0168 → | putative surface adhesion protein |
| RA | 200,545 | G→C | 6.2% | A2017A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
| RA | 201,649 | G→A | 10.1% | S2385S (TCG→TCA) | PP_0168 → | putative surface adhesion protein |
| RA | 201,652 | G→C | 11.8% | V2386V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
| RA | 201,664 | C→T | 8.9% | G2390G (GGC→GGT) | PP_0168 → | putative surface adhesion protein |
| RA | 201,859 | G→C | 10.9% | A2455A (GCG→GCC) | PP_0168 → | putative surface adhesion protein |
| RA | 202,111 | G→A | 9.5% | E2539E (GAG→GAA) | PP_0168 → | putative surface adhesion protein |
| RA | 202,117 | T→C | 9.2% | S2541S (AGT→AGC) | PP_0168 → | putative surface adhesion protein |
| RA | 202,555 | T→C | 8.7% | N2687N (AAT→AAC) | PP_0168 → | putative surface adhesion protein |
| RA | 204,224 | T→C | 7.5% | L3244L (TTG→CTG) | PP_0168 → | putative surface adhesion protein |
| RA | 205,453 | A→G | 8.6% | E3653E (GAA→GAG) | PP_0168 → | putative surface adhesion protein |
| RA | 205,651 | C→G | 6.5% | V3719V (GTC→GTG) | PP_0168 → | putative surface adhesion protein |
| RA | 205,795 | T→A | 8.0% | A3767A (GCT→GCA) | PP_0168 → | putative surface adhesion protein |
| RA | 206,311 | G→C | 10.0% | V3939V (GTG→GTC) | PP_0168 → | putative surface adhesion protein |
| RA | 206,662 | G→A | 11.0% | T4056T (ACG→ACA) | PP_0168 → | putative surface adhesion protein |
| RA | 210,799 | T→C | 9.1% | D5435D (GAT→GAC) | PP_0168 → | putative surface adhesion protein |
| RA | 211,465 | T→C | 13.1% | V5657V (GTT→GTC) | PP_0168 → | putative surface adhesion protein |
| RA | 212,572 | A→G | 11.2% | P6026P (CCA→CCG) | PP_0168 → | putative surface adhesion protein |
| RA | 213,619 | T→C | 8.7% | I6375I (ATT→ATC) | PP_0168 → | putative surface adhesion protein |
| RA | 213,652 | C→T | 8.4% | G6386G (GGC→GGT) | PP_0168 → | putative surface adhesion protein |
| RA | 215,395 | A→G | 10.4% | P6967P (CCA→CCG) | PP_0168 → | putative surface adhesion protein |
| RA | 278,742:1 | +A | 100% | intergenic (‑237/+77) | PP_0224 ← / ← sctC | Monooxygenase, DszC family/sulfur compound ABC transporter ‑ ATP‑binding subunit |
| RA | 302,935 | G→C | 22.2% | G367A (GGT→GCT) | envZ → | Osmolarity sensor protein EnvZ |
| JC | 303,121 | +GCT | 40.3% | coding (1286/1314 nt) | envZ → | Osmolarity sensor protein EnvZ |
| RA | 307,865:1 | +C | 100% | intergenic (+880/‑989) | hslO → / → PP_0254 | 33 kDa chaperonin/conserved protein of unknown function |
| RA | 336,124:1 | +T | 100% | coding (209/237 nt) | PP_0278 → | conserved protein of unknown function |
| RA | 353,067 | A→G | 100% | intergenic (+34/+84) | hisF → / ← cbcV | Imidazole glycerol phosphate synthase subunit HisF/choline / betaine / carnitine ABC transporter ‑ ATP binding subunit |
| RA | 499,203 | A→G | 100% | intergenic (+47/‑249) | uhpA → / → PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
| RA | 699,722 | A→G | 44.7% | intergenic (+115/‑129) | PP_t06 → / → PP_23SD | tRNA‑Ala/23S ribosomal RNA |
| RA | 924,319 | T→C | 10.0% | T292A (ACG→GCG) | PP_0804 ← | Protein secretion ABC efflux system, permease and ATP‑binding protein |
| RA | 924,320 | C→G | 10.3% | A291A (GCG→GCC) ‡ | PP_0804 ← | Protein secretion ABC efflux system, permease and ATP‑binding protein |
| RA | 924,321 | G→A | 10.4% | A291V (GCG→GTG) ‡ | PP_0804 ← | Protein secretion ABC efflux system, permease and ATP‑binding protein |
| JC | 1,044,759 | Δ21 bp | 7.5% | coding (467‑487/702 nt) | PP_0904 → | InaA protein |
| RA | 1,070,246:1 | +GA | 100% | intergenic (+46/+96) | aroP‑I → / ← PP_0928 | aromatic amino acid transport protein/K+‑dependent Na+/Ca+ exchanger related‑protein |
| RA | 1,126,645:1 | +C | 100% | intergenic (‑99/+50) | tdcG‑II ← / ← gcvP‑I | L‑serine dehydratase/glycine dehydrogenase |
| RA | 1,327,121 | C→T | 51.7% | intergenic (+97/‑196) | PP_16SE → / → PP_23SE | 16S ribosomal RNA/23S ribosomal RNA |
| RA | 1,419,548:1 | +C | 100% | intergenic (‑37/+99) | PP_1242 ← / ← PP_1244 | conserved protein of unknown function/conserved protein of unknown function |
| RA | 1,499,480 | 2 bp→AC | 100% | intergenic (+57/‑106) | trpS → / → zapE | Tryptophan‑‑tRNA ligase/putative enzyme with nucleoside triphosphate hydrolase domain |
| RA | 1,499,498 | 1 bp→CG | 100% | intergenic (+75/‑89) | trpS → / → zapE | Tryptophan‑‑tRNA ligase/putative enzyme with nucleoside triphosphate hydrolase domain |
| RA | 1,499,506:1 | +C | 100% | intergenic (+83/‑81) | trpS → / → zapE | Tryptophan‑‑tRNA ligase/putative enzyme with nucleoside triphosphate hydrolase domain |
| RA | 1,530,160 | C→T | 100% | R395C (CGT→TGT) noncoding (49/244 nt) |
ftsZ → PP_mr19 → |
Cell division protein FtsZ Xoo8 ncRNA |
| RA | 1,617,614 | G→A | 7.4% | G44G (GGC→GGT) | PP_1417 ← | putative Tricarboxylate transport protein TctB |
| JC | 1,780,067 | Δ62 bp | 12.7% | intergenic (+26/+19) | PP_1587 → / ← dapC | NhaP‑type Na+/H+ and K+/H+ antiporters/N‑succinyl‑L,L‑diaminopimelate aminotransferase alternative |
| RA | 1,844,166 | T→A | 100% | K210* (AAG→TAG) | gacS ← | Sensor protein GacS |
| RA | 1,932,638:1 | +C | 100% | intergenic (‑105/+45) | rluA ← / ← minE | 23S rRNA (746) and tRNA (32) pseudouridine synthase/Cell division topological specificity factor |
| RA | 2,128,530 | A→C | 8.5% | intergenic (+28/+22) | PP_1887 → / ← PP_1888 | conserved protein of unknown function/Fimbrial protein |
| RA | 2,128,531 | T→C | 8.5% | intergenic (+29/+21) | PP_1887 → / ← PP_1888 | conserved protein of unknown function/Fimbrial protein |
| RA | 2,128,532 | A→C | 8.5% | intergenic (+30/+20) | PP_1887 → / ← PP_1888 | conserved protein of unknown function/Fimbrial protein |
| RA | 2,128,533 | G→T | 8.3% | intergenic (+31/+19) | PP_1887 → / ← PP_1888 | conserved protein of unknown function/Fimbrial protein |
| RA | 2,128,534 | G→A | 8.3% | intergenic (+32/+18) | PP_1887 → / ← PP_1888 | conserved protein of unknown function/Fimbrial protein |
| RA | 2,128,535 | G→T | 8.3% | intergenic (+33/+17) | PP_1887 → / ← PP_1888 | conserved protein of unknown function/Fimbrial protein |
| RA | 2,550,125 | G→A | 50.0% | noncoding (1436/1522 nt) | PP_16SF → | 16S ribosomal RNA |
| RA | 2,909,284 | T→C | 8.7% | Q385R (CAG→CGG) ‡ | aprDA ← | alkaline protease secretion transporter ATP‑binding protein |
| RA | 2,909,285 | G→A | 8.8% | Q385* (CAG→TAG) ‡ | aprDA ← | alkaline protease secretion transporter ATP‑binding protein |
| RA | 3,142,272 | C→T | 100% | A74V (GCG→GTG) | PP_2758 → | putative Ribose ABC transporter, periplasmic ribose‑binding protein |
| RA | 3,324,091 | A→C | 11.2% | L348R (CTG→CGG) | PP_2924 ← | conserved protein of unknown function |
| RA | 3,845,703:1 | +G | 100% | intergenic (‑70/+28) | PP_3394 ← / ← PP_3395 | putative 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/Transcriptional regulator, LysR family |
| RA | 3,904,004 | T→G | 9.1% | I247L (ATC→CTC) | ilvA‑I ← | threonine deaminase |
| RA | 3,925,054 | G→T | 11.8% | V479V (GTC→GTA) | peaA ← | quinohaemoprotein amine dehydrogenase, alpha subunit |
| RA | 3,951,159 | T→C | 100% | intergenic (‑123/+72) | PP_3486 ← / ← PP_3487 | putative cytochrome c/conserved exported protein of unknown function |
| RA | 3,951,161 | A→T | 100% | intergenic (‑125/+70) | PP_3486 ← / ← PP_3487 | putative cytochrome c/conserved exported protein of unknown function |
| RA | 4,348,705 | A→G | 57.1% | intergenic (‑70/+404) | PP_3820 ← / ← galU | Group II intron‑encoding maturase/UTP‑glucose‑1‑phosphate uridylyltransferase |
| RA | 4,586,030 | 2 bp→TC | 100% | intergenic (+113/+101) | PP_4061 → / ← PP_4063 | conserved protein of unknown function/putative Long‑chain‑fatty‑acid‑CoA ligase |
| RA | 4,586,033:1 | +G | 100% | intergenic (+116/+99) | PP_4061 → / ← PP_4063 | conserved protein of unknown function/putative Long‑chain‑fatty‑acid‑CoA ligase |
| RA | 4,586,056:1 | +C | 100% | intergenic (+139/+76) | PP_4061 → / ← PP_4063 | conserved protein of unknown function/putative Long‑chain‑fatty‑acid‑CoA ligase |
| RA | 4,740,805 | Δ1 bp | 100% | intergenic (+42/+711) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,740,816 | T→G | 100% | intergenic (+53/+700) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,740,819 | 2 bp→CT | 100% | intergenic (+56/+696) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,229 | A→C | 100% | intergenic (+466/+287) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,231 | C→G | 82.9% | intergenic (+468/+285) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,232 | C→T | 17.1% | intergenic (+469/+284) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,234 | C→T | 82.9% | intergenic (+471/+282) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,235 | C→T | 17.0% | intergenic (+472/+281) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,236 | G→T | 82.9% | intergenic (+473/+280) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,237 | C→G | 82.9% | intergenic (+474/+279) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,239 | A→G | 83.0% | intergenic (+476/+277) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,240 | A→C | 17.1% | intergenic (+477/+276) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,241 | C→T | 17.1% | intergenic (+478/+275) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,243 | G→T | 80.5% | intergenic (+480/+273) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,244 | C→G | 80.5% | intergenic (+481/+272) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,245 | A→C | 80.5% | intergenic (+482/+271) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,255 | C→T | 100% | intergenic (+492/+261) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,257 | A→C | 100% | intergenic (+494/+259) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,260 | 2 bp→GC | 100% | intergenic (+497/+255) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,263 | A→C | 100% | intergenic (+500/+253) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,272 | A→G | 100% | intergenic (+509/+244) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,274 | A→C | 100% | intergenic (+511/+242) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,276 | G→C | 100% | intergenic (+513/+240) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,278 | C→T | 100% | intergenic (+515/+238) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,283:1 | +T | 100% | intergenic (+520/+233) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,289 | C→G | 100% | intergenic (+526/+227) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,292 | C→T | 100% | intergenic (+529/+224) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,294 | C→G | 100% | intergenic (+531/+222) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,296 | A→C | 100% | intergenic (+533/+220) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| RA | 4,741,298 | C→T | 100% | intergenic (+535/+218) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| JC | 4,808,175 | Δ14 bp | 100% | intergenic (‑284/‑258) | PP_4234 ← / → dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| JC | 4,808,177 | Δ103 bp | 57.1% | intergenic (‑286/‑167) | PP_4234 ← / → dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| RA | 4,847,088 | A→C | 11.7% | D613A (GAC→GCC) | PP_4261 → | cation‑transporting P‑type ATPase |
| RA | 4,964,454 | C→T | 100% | D302N (GAC→AAC) | fleQ ← | Transcriptional regulator FleQ |
| JC | 4,980,585 | +GGC | 100% | intergenic (‑24/+44) | PP_4387 ← / ← flgE | conserved exported protein of unknown function/Flagellar hook protein FlgE |
| RA | 5,087,105 | A→T | 12.5% | L73Q (CTG→CAG) | astB ← | N‑succinylarginine dihydrolase |
| JC | 5,201,568 | Δ98 bp | 44.0% | intergenic (‑54/‑29) | PP_4582 ← / → PP_4583 | conserved membrane protein of unknown function/putative Peptidase |
| JC | 5,555,608 | +GCC | 100% | intergenic (‑84/+87) | PP_4887 ← / ← PP_4888 | conserved protein of unknown function/putative methyl‑accepting chemotaxis transducer |
| RA | 5,674,750:1 | +G | 100% | intergenic (+112/+28) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding protein, acidic stress response factor |
| RA | 5,674,753 | G→C | 100% | intergenic (+115/+25) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding protein, acidic stress response factor |
| JC | 5,681,415 | +CGGG | 100% | intergenic (‑133/+71) | PP_4986 ← / ← PP_4987 | Channel protein, hemolysin III family/putative Chemotaxis protein |
| RA | 5,725,646 | T→G | 8.5% | K440N (AAA→AAC) | opgH ← | Glucans biosynthesis glucosyltransferase H |
| RA | 5,725,652 | C→G | 7.2% | P438P (CCG→CCC) | opgH ← | Glucans biosynthesis glucosyltransferase H |
| RA | 5,988,809 | G→A | 39.4% | intergenic (+103/‑443) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,819 | T→C | 34.3% | intergenic (+113/‑433) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,889 | C→A | 30.3% | intergenic (+183/‑363) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,894 | C→T | 32.1% | intergenic (+188/‑358) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,895 | A→G | 32.7% | intergenic (+189/‑357) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,905 | T→C | 27.6% | intergenic (+199/‑347) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 5,988,911 | Δ1 bp | 25.9% | intergenic (+205/‑341) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| RA | 6,013,885 | T→C | 100% | intergenic (+90/+20) | xpt → / ← PP_5266 | Xanthine phosphoribosyltransferase/putative acetyl‑CoA hydrolase family protein |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AE015451 | 486279 | 486451 | 173 | 10 [9] | [8] 13 | [apaG] | [apaG] |
| * | * | ÷ | AE015451 | 726760 | 726901 | 142 | 10 [9] | [6] 10 | PP_0620/PP_0621 | GntR family transcriptional regulator/conserved protein of unknown function |
| * | * | ÷ | AE015451 | 1156161 | 1156310 | 150 | 10 [9] | [9] 10 | [PP_1013] | [PP_1013] |
| * | * | ÷ | AE015451 | 1367557 | 1367864 | 308 | 10 [8] | [9] 10 | [PP_1193] | [PP_1193] |
| * | * | ÷ | AE015451 | 1421725 | 1422042 | 318 | 10 [8] | [9] 10 | PP_1246 | conserved exported protein of unknown function |
| * | * | ÷ | AE015451 | 1691054 | 1691248 | 195 | 10 [9] | [8] 10 | PP_1487 | conserved protein of unknown function |
| * | * | ÷ | AE015451 | 2038228 | 2038420 | 193 | 10 [9] | [7] 11 | [rffE] | [rffE] |
| * | * | ÷ | AE015451 | 2095172 | 2095292 | 121 | 10 [8] | [9] 10 | [alaA] | [alaA] |
| * | * | ÷ | AE015451 | 2142352 | 2142498 | 147 | 11 [9] | [7] 10 | [PP_1897] | [PP_1897] |
| * | * | ÷ | AE015451 | 2388211 | 2388377 | 167 | 11 [9] | [9] 11 | [pyrD] | [pyrD] |
| * | * | ÷ | AE015451 | 2478371 | 2478514 | 144 | 10 [9] | [9] 10 | PP_2172 | conserved exported protein of unknown function |
| * | * | ÷ | AE015451 | 2865395 | 2865579 | 185 | 14 [9] | [8] 10 | [glllA] | [glllA] |
| * | * | ÷ | AE015451 | 2960806 | 2961047 | 242 | 10 [9] | [9] 11 | PP_2590 | Outer membrane ferric siderophore receptor |
| * | * | ÷ | AE015451 | 3287123 | 3287280 | 158 | 10 [9] | [9] 10 | [PP_2889] | [PP_2889] |
| * | * | ÷ | AE015451 | 3848803 | 3848919 | 117 | 13 [9] | [9] 11 | PP_3397 | conserved exported protein of unknown function |
| * | * | ÷ | AE015451 | 3985564 | 3985737 | 174 | 10 [6] | [9] 10 | [PP_3513]–[oplB] | [PP_3513],[oplB] |
| * | * | ÷ | AE015451 | 4705267 | 4705367 | 101 | 11 [9] | [6] 11 | kdpF/PP_4162 | potassium‑transporting ATPase F/conserved membrane protein of unknown function |
| * | * | ÷ | AE015451 | 4839223 | 4839361 | 139 | 14 [8] | [9] 10 | [PP_4254] | [PP_4254] |
| * | * | ÷ | AE015451 | 5660516 | 5660672 | 157 | 10 [6] | [9] 10 | ligB | DNA ligase B |
| * | * | ÷ | AE015451 | 5696601 | 5696721 | 121 | 10 [7] | [9] 12 | pyrC'/hslV | dihydroorotase‑like protein/peptidase component of the ATP‑dependent HslVU protease |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 106235 | 41 (1.030) | 4 (0.110) | 4/318 | NT | 8.8% | coding (102/1518 nt) | PP_0101 | putative sulfate transporter |
| ? | AE015451 | = 106261 | 44 (1.160) | coding (128/1518 nt) | PP_0101 | putative sulfate transporter | |||||
| * | ? | AE015451 | 131895 = | 39 (0.980) | 4 (0.110) | 3/320 | NT | 10.2% | coding (87/618 nt) | cc | Cytochrome c4 |
| ? | AE015451 | 131994 = | 33 (0.870) | coding (186/618 nt) | cc | Cytochrome c4 | |||||
| * | ? | AE015451 | 208966 = | NA (NA) | 4 (0.110) | 3/320 | NT | 10.2% | coding (14472/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | AE015451 | 208967 = | 37 (0.930) | coding (14473/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
| * | ? | AE015451 | 212746 = | 36 (0.900) | 3 (0.080) | 3/326 | NT | 8.0% | coding (18252/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | AE015451 | 212769 = | 34 (0.880) | coding (18275/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
| * | ? | AE015451 | 409939 = | 46 (1.150) | 3 (0.080) | 3/320 | NT | 7.1% | coding (725/2646 nt) | aceE | Pyruvate dehydrogenase E1 component |
| ? | AE015451 | 410027 = | 35 (0.920) | coding (637/2646 nt) | aceE | Pyruvate dehydrogenase E1 component | |||||
| * | ? | AE015451 | 489452 = | 49 (1.230) | 6 (0.160) | 6/320 | NT | 12.2% | coding (166/1320 nt) | surA | peptidyl‑prolyl cis‑trans isomerase |
| ? | AE015451 | 489481 = | 40 (1.050) | coding (137/1320 nt) | surA | peptidyl‑prolyl cis‑trans isomerase | |||||
| * | ? | AE015451 | = 499202 | 36 (0.900) | 3 (0.080) +GGGCATGCCC |
3/316 | NT | 8.1% | intergenic (+46/‑250) | uhpA/PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein |
| ? | AE015451 | = 499202 | 36 (0.900) | intergenic (+46/‑250) | uhpA/PP_0411 | DNA‑binding response regulator UhpA/Polyamine ABC transporter, ATP‑binding protein | |||||
| * | ? | AE015451 | 514686 = | 38 (0.950) | 3 (0.080) | 3/318 | NT | 7.1% | coding (398/1041 nt) | PP_0426 | conserved membrane protein of unknown function |
| ? | AE015451 | 515222 = | 43 (1.140) | coding (520/648 nt) | coq | 2‑nonaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol hydroxylase | |||||
| * | ? | AE015451 | 608871 = | 35 (0.880) | 5 (0.130) | 5/322 | NT | 12.6% | coding (742/813 nt) | PP_0524 | putative Periplasmic cobalamin‑binding protein HutB |
| ? | AE015451 | 608902 = | 36 (0.940) | coding (773/813 nt) | PP_0524 | putative Periplasmic cobalamin‑binding protein HutB | |||||
| * | ? | AE015451 | 611504 = | NA (NA) | 7 (0.180) | 7/322 | NT | NA | coding (401/966 nt) | PP_0526 | transposase |
| ? | AE015451 | 611533 = | NA (NA) | coding (430/966 nt) | PP_0526 | transposase | |||||
| * | ? | AE015451 | = 612009 | NA (NA) | 4 (0.110) | 3/314 | NT | NA | coding (906/966 nt) | PP_0526 | transposase |
| ? | AE015451 | = 612012 | NA (NA) | coding (909/966 nt) | PP_0526 | transposase | |||||
| * | ? | AE015451 | = 631260 | 35 (0.880) | 6 (0.160) | 6/318 | NT | 14.4% | coding (433/1449 nt) | PP_0544 | Ethanolamine transporter |
| ? | AE015451 | = 631305 | 38 (1.000) | coding (388/1449 nt) | PP_0544 | Ethanolamine transporter | |||||
| * | ? | AE015451 | 682075 = | 31 (0.780) | 4 (0.110) | 4/308 | NT | 12.4% | coding (1198/1944 nt) | PP_0584 | Methyl‑accepting chemotaxis transducer |
| ? | AE015451 | 682089 = | 28 (0.760) | coding (1184/1944 nt) | PP_0584 | Methyl‑accepting chemotaxis transducer | |||||
| * | ? | AE015451 | 830412 = | 42 (1.050) | 3 (0.080) | 3/318 | NT | 7.3% | coding (787/1098 nt) | PP_0714 | Transporter, PerM family |
| ? | AE015451 | 830513 = | 37 (0.980) | coding (888/1098 nt) | PP_0714 | Transporter, PerM family | |||||
| * | ? | AE015451 | = 863172 | 31 (0.780) | 3 (0.080) | 3/316 | NT | 8.8% | coding (306/1017 nt) | hemH | Ferrochelatase |
| ? | AE015451 | = 863193 | 33 (0.880) | coding (327/1017 nt) | hemH | Ferrochelatase | |||||
| * | ? | AE015451 | 874528 = | 66 (1.650) | 4 (0.110) | 4/316 | NT | 6.4% | coding (107/840 nt) | PP_0759 | conserved exported protein of unknown function |
| ? | AE015451 | 874551 = | 54 (1.440) | coding (130/840 nt) | PP_0759 | conserved exported protein of unknown function | |||||
| * | ? | AE015451 | 923641 = | 33 (0.830) | 3 (0.090) | 3/296 | NT | 9.7% | coding (1552/2169 nt) | PP_0804 | Protein secretion ABC efflux system, permease and ATP‑binding protein |
| ? | AE015451 | 923661 = | 27 (0.770) | coding (1532/2169 nt) | PP_0804 | Protein secretion ABC efflux system, permease and ATP‑binding protein | |||||
| * | ? | AE015451 | 981325 = | 40 (1.000) | 4 (0.110) | 4/316 | NT | 9.0% | coding (202/1863 nt) | hscA | DnaK‑like molecular chaperone specific for IscU |
| ? | AE015451 | 981403 = | 43 (1.140) | coding (280/1863 nt) | hscA | DnaK‑like molecular chaperone specific for IscU | |||||
| * | ? | AE015451 | = 1039478 | 42 (1.050) | 3 (0.080) | 3/304 | NT | 7.1% | intergenic (‑84/‑166) | PP_0897/PP_0899 | Fumarate hydratase, class I/putative Ferredoxin reductase |
| ? | AE015451 | = 1039462 | 40 (1.110) | intergenic (‑68/‑182) | PP_0897/PP_0899 | Fumarate hydratase, class I/putative Ferredoxin reductase | |||||
| * | ? | AE015451 | 1042953 = | 44 (1.100) | 4 (0.110) | 4/316 | NT | 8.9% | coding (763/1311 nt) | colS | integral membrane sensor signal transduction histidine kinase |
| ? | AE015451 | 1043012 = | 41 (1.090) | coding (822/1311 nt) | colS | integral membrane sensor signal transduction histidine kinase | |||||
| * | ? | AE015451 | 1062747 = | 45 (1.130) | 5 (0.130) | 5/316 | NT | 10.4% | intergenic (+17/+92) | PP_0919/xenB | conserved protein of unknown function/Xenobiotic reductase B |
| ? | AE015451 | 1062829 = | 44 (1.170) | intergenic (+99/+10) | PP_0919/xenB | conserved protein of unknown function/Xenobiotic reductase B | |||||
| * | ? | AE015451 | 1074831 = | 50 (1.250) | 3 (0.080) | 3/320 | NT | 7.4% | coding (25/1452 nt) | gatA | Glutamyl‑tRNA(Gln) amidotransferase subunit A |
| ? | AE015451 | 1075058 = | 28 (0.740) | coding (122/309 nt) | gatC | Aspartyl/glutamyl‑tRNA(Asn/Gln) amidotransferase subunit C | |||||
| * | ? | AE015451 | 1109670 = | 42 (1.050) | 3 (0.080) | 3/326 | NT | 7.2% | coding (336/651 nt) | PP_0969 | Transcriptional regulator, GntR family |
| ? | AE015451 | 1109701 = | 37 (0.950) | coding (367/651 nt) | PP_0969 | Transcriptional regulator, GntR family | |||||
| * | ? | AE015451 | = 1135979 | 35 (0.880) | 4 (0.110) | 4/314 | NT | 10.7% | coding (996/1509 nt) | PP_0997 | Sigma‑54 dependent transcriptional regulator/sensory box protein |
| ? | AE015451 | = 1136013 | 34 (0.910) | coding (962/1509 nt) | PP_0997 | Sigma‑54 dependent transcriptional regulator/sensory box protein | |||||
| * | ? | AE015451 | 1185031 = | 41 (1.030) | 3 (0.080) | 3/320 | NT | 7.1% | coding (236/3900 nt) | purL | Phosphoribosylformylglycinamidine synthase |
| ? | AE015451 | 1185425 = | 39 (1.020) | coding (630/3900 nt) | purL | Phosphoribosylformylglycinamidine synthase | |||||
| * | ? | AE015451 | 1264265 = | 27 (0.680) | 3 (0.080) | 3/314 | NT | 10.1% | coding (142/1659 nt) | PP_1105 | putative DNA ligase, ATP‑dependent |
| ? | AE015451 | 1264318 = | 28 (0.750) | coding (89/1659 nt) | PP_1105 | putative DNA ligase, ATP‑dependent | |||||
| * | ? | AE015451 | 1296784 = | NA (NA) | 12 (0.310) | 8/322 | NT | NA | intergenic (‑537/‑29) | nhaA‑I/PP_1133 | Na(+)/H(+) antiporter NhaA 1/transposase |
| ? | AE015451 | 1296822 = | NA (NA) | coding (10/1329 nt) | PP_1133 | transposase | |||||
| * | ? | AE015451 | 1308616 = | 34 (0.850) | 3 (0.080) | 3/318 | NT | 8.3% | coding (136/888 nt) | PP_1143 | 3‑hydroxyisobutyrate dehydrogenase family protein |
| ? | AE015451 | 1308643 = | 34 (0.900) | coding (163/888 nt) | PP_1143 | 3‑hydroxyisobutyrate dehydrogenase family protein | |||||
| * | ? | AE015451 | = 1331993 | NA (NA) | 3 (0.080) | 3/328 | NT | NA | coding (1218/1644 nt) | PP_1157 | Acetolactate synthase |
| ? | AE015451 | = 1332001 | NA (NA) | coding (1226/1644 nt) | PP_1157 | Acetolactate synthase | |||||
| * | ? | AE015451 | 1335821 = | 38 (0.950) | 4 (0.110) | 4/314 | NT | 10.9% | coding (35/672 nt) | PP_1161 | putative Lipoprotein |
| ? | AE015451 | 1335849 = | 30 (0.800) | coding (63/672 nt) | PP_1161 | putative Lipoprotein | |||||
| * | ? | AE015451 | = 1395221 | 39 (0.980) | 4 (0.110) | 4/304 | NT | 11.1% | coding (958/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB |
| ? | AE015451 | = 1395205 | 29 (0.800) | coding (942/1047 nt) | ruvB | Holliday junction ATP‑dependent DNA helicase RuvB | |||||
| * | ? | AE015451 | = 1411412 | 25 (0.630) | 5 (0.130) | 5/318 | NT | 16.8% | coding (523/1437 nt) | PP_1232 | conserved exported protein of unknown function |
| ? | AE015451 | = 1411433 | 26 (0.690) | coding (502/1437 nt) | PP_1232 | conserved exported protein of unknown function | |||||
| * | ? | AE015451 | = 1479077 | 50 (1.250) | 3 (0.080) | 3/314 | NT | 5.8% | coding (141/471 nt) | moaC | Cyclic pyranopterin monophosphate synthase accessory protein |
| ? | AE015451 | = 1479089 | 50 (1.340) | coding (153/471 nt) | moaC | Cyclic pyranopterin monophosphate synthase accessory protein | |||||
| * | ? | AE015451 | = 1594248 | 32 (0.800) | 4 (0.110) | 3/320 | NT | 11.0% | coding (1175/1320 nt) | kgtP | Alpha‑ketoglutarate permease |
| ? | AE015451 | = 1594250 | 34 (0.890) | coding (1173/1320 nt) | kgtP | Alpha‑ketoglutarate permease | |||||
| * | ? | AE015451 | 1656686 = | 37 (0.930) | 3 (0.080) | 3/318 | NT | 7.9% | coding (83/4527 nt) | PP_1449 | conserved exported protein of unknown function |
| ? | AE015451 | 1656725 = | 35 (0.930) | coding (44/4527 nt) | PP_1449 | conserved exported protein of unknown function | |||||
| * | ? | AE015451 | 1727853 = | 47 (1.180) | 7 (0.180) | 6/320 | NT | 16.0% | coding (311/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase |
| ? | AE015451 | 1727976 = | 29 (0.760) | coding (188/2487 nt) | plsB | glycerol‑3‑phosphate acyltransferase | |||||
| * | ? | AE015451 | 1731163 = | 15 (0.380) | 3 (0.090) | 3/280 | NT | 23.5% | intergenic (‑76/+115) | dapE/PP_1526 | Succinyl‑diaminopimelate desuccinylase/putative Beta‑(1‑3)‑glucosyl transferase |
| ? | AE015451 | 1731255 = | 7 (0.210) | intergenic (‑168/+23) | dapE/PP_1526 | Succinyl‑diaminopimelate desuccinylase/putative Beta‑(1‑3)‑glucosyl transferase | |||||
| * | ? | AE015451 | 1737987 = | 39 (0.980) | 11 (0.310) | 10/302 | NT | 20.0% | coding (32/348 nt) | yffB | putative glutathione‑dependent thiol reductase |
| ? | AE015451 | = 1777401 | 53 (1.480) | intergenic (+135/+157) | PP_5476/PP_1585 | conserved protein of unknown function/putative Antidote protein | |||||
| * | ? | AE015451 | = 1747346 | 60 (1.500) | 4 (0.100) | 4/336 | NT | 6.1% | coding (163/219 nt) | PP_5473 | putative transcriptional regulator, LuxR family |
| ? | AE015451 | 4417589 = | 63 (1.580) | coding (482/552 nt) | PP_3905 | Transcriptional regulator, LuxR family | |||||
| * | ? | AE015451 | 1777515 = | 54 (1.350) | 3 (0.080) | 3/318 | NT | 5.6% | intergenic (+249/+43) | PP_5476/PP_1585 | conserved protein of unknown function/putative Antidote protein |
| ? | AE015451 | 1777535 = | 50 (1.320) | intergenic (+269/+23) | PP_5476/PP_1585 | conserved protein of unknown function/putative Antidote protein | |||||
| * | ? | AE015451 | = 1899908 | 31 (0.780) | 4 (0.110) | 4/314 | NT | 14.3% | coding (459/4026 nt) | PP_1703 | assimilatory nitrate reductase/sulfite reductase |
| ? | AE015451 | = 1899959 | 19 (0.510) | coding (510/4026 nt) | PP_1703 | assimilatory nitrate reductase/sulfite reductase | |||||
| * | ? | AE015451 | = 1933967 | 33 (0.830) | 3 (0.080) | 3/318 | NT | 11.1% | coding (724/828 nt) | minC | Probable septum site‑determining protein MinC |
| ? | AE015451 | = 1934030 | 17 (0.450) | coding (661/828 nt) | minC | Probable septum site‑determining protein MinC | |||||
| * | ? | AE015451 | = 1950624 | 23 (0.580) | 3 (0.080) | 3/320 | NT | 11.6% | coding (822/1788 nt) | asnB | asparagine synthetase |
| ? | AE015451 | = 1950673 | 24 (0.630) | coding (773/1788 nt) | asnB | asparagine synthetase | |||||
| * | ? | AE015451 | = 1954483 | 32 (0.800) | 3 (0.080) | 3/322 | NT | 8.4% | coding (807/1494 nt) | PP_1752 | conserved protein of unknown function |
| ? | AE015451 | = 1954519 | 35 (0.910) | coding (843/1494 nt) | PP_1752 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 1957618 | 46 (1.150) | 3 (0.080) | 3/316 | NT | 6.0% | intergenic (+46/+51) | PP_1754/fumC‑II | conserved protein of unknown function/fumarate hydratase (class 2) |
| ? | AE015451 | = 1957649 | 50 (1.330) | intergenic (+77/+20) | PP_1754/fumC‑II | conserved protein of unknown function/fumarate hydratase (class 2) | |||||
| * | ? | AE015451 | = 1964713 | 37 (0.930) | 3 (0.080) | 3/322 | NT | 7.7% | coding (925/2526 nt) | yegE | diguanylate cyclase with phosphodiesterase domain |
| ? | AE015451 | = 1964714 | 36 (0.940) | coding (926/2526 nt) | yegE | diguanylate cyclase with phosphodiesterase domain | |||||
| * | ? | AE015451 | = 2020506 | 38 (0.950) | 3 (0.080) | 3/326 | NT | 7.3% | coding (459/1416 nt) | PP_1798 | Outer membrane efflux protein |
| ? | AE015451 | = 2020515 | 39 (1.010) | coding (468/1416 nt) | PP_1798 | Outer membrane efflux protein | |||||
| * | ? | AE015451 | 2021476 = | 51 (1.280) | 3 (0.080) | 3/314 | NT | 6.7% | intergenic (+13/‑426) | PP_1798/gmd | Outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase |
| ? | AE015451 | 2021501 = | 36 (0.960) | intergenic (+38/‑401) | PP_1798/gmd | Outer membrane efflux protein/GDP‑mannose 4,6‑dehydratase | |||||
| * | ? | AE015451 | 2054713 = | 50 (1.250) | 3 (0.080) | 3/310 | NT | 6.2% | intergenic (‑88/‑147) | PP_1829/aroC | Hydrolase, alpha/beta fold family/Chorismate synthase |
| ? | AE015451 | 2054775 = | 44 (1.190) | intergenic (‑150/‑85) | PP_1829/aroC | Hydrolase, alpha/beta fold family/Chorismate synthase | |||||
| * | ? | AE015451 | = 2086080 | NA (NA) | 6 (0.160) | 6/322 | NT | NA | coding (195/1302 nt) | PP_1865 | transposase |
| ? | AE015451 | = 2086138 | NA (NA) | coding (253/1302 nt) | PP_1865 | transposase | |||||
| * | ? | AE015451 | 2101747 = | 47 (1.180) | 3 (0.080) | 3/300 | NT | 6.8% | coding (561/768 nt) | PP_1878 | conserved protein of unknown function |
| ? | AE015451 | 2101765 = | 40 (1.120) | coding (543/768 nt) | PP_1878 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 2233066 = | 17 (0.430) | 4 (0.120) | 4/290 | NT | 19.2% | intergenic (+26/+205) | PP_1971/PP_t63 | conserved protein of unknown function/tRNA‑Asn |
| ? | AE015451 | 2233158 = | 19 (0.550) | intergenic (+118/+113) | PP_1971/PP_t63 | conserved protein of unknown function/tRNA‑Asn | |||||
| * | ? | AE015451 | 2295839 = | 38 (0.950) | 4 (0.110) | 4/308 | NT | 10.4% | intergenic (+85/+48) | PP_5496/PP_2023 | conserved exported protein of unknown function/Glutathione S‑transferase family protein |
| ? | AE015451 | 2295853 = | 34 (0.930) | intergenic (+99/+34) | PP_5496/PP_2023 | conserved exported protein of unknown function/Glutathione S‑transferase family protein | |||||
| * | ? | AE015451 | 2321086 = | 44 (1.100) | 4 (0.110) | 4/304 | NT | 9.3% | coding (155/945 nt) | PP_2041 | Transcriptional regulator, LysR family |
| ? | AE015451 | 2321102 = | 38 (1.050) | coding (139/945 nt) | PP_2041 | Transcriptional regulator, LysR family | |||||
| * | ? | AE015451 | = 2325662 | 15 (0.380) | 3 (0.080) | 3/320 | NT | 16.1% | coding (1642/1962 nt) | PP_2045 | Metallo‑beta‑lactamase family protein |
| ? | AE015451 | = 2325678 | 17 (0.450) | coding (1626/1962 nt) | PP_2045 | Metallo‑beta‑lactamase family protein | |||||
| * | ? | AE015451 | 2386077 = | 33 (0.830) | 3 (0.080) | 3/318 | NT | 7.8% | coding (1027/1215 nt) | PP_2094 | putative Nitrate‑binding protein NasS |
| ? | AE015451 | 2386182 = | 40 (1.060) | coding (922/1215 nt) | PP_2094 | putative Nitrate‑binding protein NasS | |||||
| * | ? | AE015451 | = 2407211 | 34 (0.850) | 3 (0.080) | 3/318 | NT | 8.1% | coding (1354/1566 nt) | PP_2111 | putative aerotaxis receptor |
| ? | AE015451 | = 2407274 | 36 (0.950) | coding (1291/1566 nt) | PP_2111 | putative aerotaxis receptor | |||||
| * | ? | AE015451 | = 2412887 | 30 (0.750) | 3 (0.080) | 3/316 | NT | 10.7% | intergenic (+151/‑270) | rlmM/PP_2114 | Ribosomal RNA large subunit methyltransferase M/transposase |
| ? | AE015451 | = 4908014 | 22 (0.590) | coding (11/198 nt) | PP_4317 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 2468748 = | 32 (0.800) | 3 (0.080) | 3/326 | NT | 9.2% | coding (175/564 nt) | PP_2162 | putative phosphonoacetaldehyde phosphonohydrolase‑related protein |
| ? | AE015451 | 2468891 = | 28 (0.720) | coding (32/564 nt) | PP_2162 | putative phosphonoacetaldehyde phosphonohydrolase‑related protein | |||||
| * | ? | AE015451 | = 2472115 | 41 (1.030) | 11 (0.290) | 10/322 | NT | 24.1% | intergenic (+19/+130) | PP_2166/PP_2167 | Anti‑anti‑sigma factor/putative PhoD‑like phosphatase |
| ? | AE015451 | 2472313 = | 30 (0.780) | coding (1783/1851 nt) | PP_2167 | putative PhoD‑like phosphatase | |||||
| * | ? | AE015451 | = 2529011 | 31 (0.780) | 3 (0.080) | 3/316 | NT | 10.5% | intergenic (+138/‑269) | PP_2217/PP_2218 | enoyl‑CoA hydratase/transposase |
| ? | AE015451 | = 4908014 | 22 (0.590) | coding (11/198 nt) | PP_4317 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 2563175 | 18 (0.450) | 3 (0.080) | 3/318 | NT | 16.2% | coding (913/1137 nt) | dauA | catabolic D‑arginine dehydrogenase, FAD‑dependent |
| ? | AE015451 | = 2563250 | 14 (0.370) | coding (988/1137 nt) | dauA | catabolic D‑arginine dehydrogenase, FAD‑dependent | |||||
| * | ? | AE015451 | = 2710846 | 46 (1.150) | 3 (0.080) | 3/308 | NT | 6.4% | intergenic (+149/+165) | PP_2373/PP_2374 | conserved protein of unknown function/conserved protein of unknown function |
| ? | AE015451 | = 2710904 | 46 (1.260) | intergenic (+207/+107) | PP_2373/PP_2374 | conserved protein of unknown function/conserved protein of unknown function | |||||
| * | ? | AE015451 | 2749686 = | 38 (0.950) | 4 (0.100) | 4/322 | NT | 10.9% | coding (804/849 nt) | PP_2406 | putative quinate/shikimate dehydrogenase |
| ? | AE015451 | 2749762 = | 29 (0.760) | coding (728/849 nt) | PP_2406 | putative quinate/shikimate dehydrogenase | |||||
| * | ? | AE015451 | 2909022 = | 34 (0.850) | 4 (0.110) | 4/318 | NT | 12.9% | coding (1416/1737 nt) | aprDA | alkaline protease secretion transporter ATP‑binding protein |
| ? | AE015451 | 2909058 = | 22 (0.580) | coding (1380/1737 nt) | aprDA | alkaline protease secretion transporter ATP‑binding protein | |||||
| * | ? | AE015451 | 2979378 = | 14 (0.350) | 3 (0.080) | 3/320 | NT | 21.2% | coding (907/1689 nt) | PP_2605 | conserved protein of unknown function |
| ? | AE015451 | 2979417 = | 9 (0.240) | coding (868/1689 nt) | PP_2605 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 3073301 = | 22 (0.550) | 3 (0.080) | 3/318 | NT | 14.0% | coding (1007/1671 nt) | PP_2683 | putative sensory box histidine kinase/response regulator |
| ? | AE015451 | 3073609 = | 16 (0.420) | coding (1315/1671 nt) | PP_2683 | putative sensory box histidine kinase/response regulator | |||||
| * | ? | AE015451 | = 3081615 | 30 (0.750) | 3 (0.080) | 3/322 | NT | 9.3% | coding (900/1719 nt) | PP_2691 | conserved protein of unknown function |
| ? | AE015451 | = 3081628 | 30 (0.780) | coding (887/1719 nt) | PP_2691 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 3193915 = | 33 (0.830) | 3 (0.080) | 3/324 | NT | 8.4% | coding (955/1332 nt) | PP_2802 | Amino acid permease family protein |
| ? | AE015451 | 3193939 = | 34 (0.880) | coding (931/1332 nt) | PP_2802 | Amino acid permease family protein | |||||
| * | ? | AE015451 | = 3208442 | 20 (0.500) | 3 (0.080) | 3/314 | NT | 10.4% | coding (2091/2415 nt) | PP_2812 | putative Transporter |
| ? | AE015451 | = 3208493 | 33 (0.880) | coding (2142/2415 nt) | PP_2812 | putative Transporter | |||||
| * | ? | AE015451 | 3212447 = | 48 (1.200) | 3 (0.080) | 3/320 | NT | 6.1% | coding (396/567 nt) | PP_2816 | putative Transcriptional regulator NfxB |
| ? | AE015451 | 3212597 = | 47 (1.240) | coding (246/567 nt) | PP_2816 | putative Transcriptional regulator NfxB | |||||
| * | ? | AE015451 | = 3289979 | 43 (1.080) | 3 (0.080) | 3/322 | NT | 6.8% | coding (1011/1752 nt) | PP_2892 | conserved exported protein of unknown function |
| ? | AE015451 | = 3290000 | 41 (1.070) | coding (1032/1752 nt) | PP_2892 | conserved exported protein of unknown function | |||||
| * | ? | AE015451 | 3296493 = | 36 (0.900) | 4 (0.110) | 3/320 | NT | 11.1% | coding (382/492 nt) | PP_2898 | conserved exported protein of unknown function |
| ? | AE015451 | 3296511 = | 30 (0.790) | coding (364/492 nt) | PP_2898 | conserved exported protein of unknown function | |||||
| * | ? | AE015451 | = 3393646 | 26 (0.650) | 3 (0.080) | 3/318 | NT | 10.8% | coding (761/900 nt) | PP_2997 | CnmA |
| ? | AE015451 | = 3393657 | 25 (0.660) | coding (750/900 nt) | PP_2997 | CnmA | |||||
| * | ? | AE015451 | 3409687 = | 23 (0.580) | 3 (0.080) | 3/308 | NT | 12.2% | intergenic (‑253/‑283) | PP_3022/PP_3024 | Transcriptional regulator, AraC family/conserved protein of unknown function |
| ? | AE015451 | 3409701 = | 22 (0.600) | intergenic (‑267/‑269) | PP_3022/PP_3024 | Transcriptional regulator, AraC family/conserved protein of unknown function | |||||
| * | ? | AE015451 | 3409928 = | 37 (0.930) | 7 (0.180) | 7/326 | NT | 14.6% | intergenic (‑494/‑42) | PP_3022/PP_3024 | Transcriptional regulator, AraC family/conserved protein of unknown function |
| ? | AE015451 | = 3450711 | 46 (1.190) | intergenic (‑125/+258) | PP_5558/PP_3069 | putative transcriptional xre family of phage origin/Outer membrane autotransporter | |||||
| * | ? | AE015451 | 3556422 = | 22 (0.550) | 3 (0.080) | 3/330 | NT | 12.6% | coding (839/1188 nt) | PP_3140 | Glycosyl transferase, group 2 family protein |
| ? | AE015451 | 3556443 = | 20 (0.510) | coding (860/1188 nt) | PP_3140 | Glycosyl transferase, group 2 family protein | |||||
| * | ? | AE015451 | = 3593008 | 25 (0.630) | 4 (0.110) | 4/316 | NT | 14.7% | coding (44/981 nt) | PP_3171 | conserved protein of unknown function |
| ? | AE015451 | = 3593013 | 23 (0.610) | coding (49/981 nt) | PP_3171 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 3643464 = | 32 (0.800) | 3 (0.080) | 3/316 | NT | 8.9% | coding (583/804 nt) | PP_3210 | ABC transporter, permease protein |
| ? | AE015451 | 3643546 = | 31 (0.820) | coding (501/804 nt) | PP_3210 | ABC transporter, permease protein | |||||
| * | ? | AE015451 | 3704879 = | 41 (1.030) | 3 (0.080) | 3/330 | NT | 7.0% | coding (1123/2055 nt) | paaZ | oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase |
| ? | AE015451 | 3704899 = | 40 (1.020) | coding (1103/2055 nt) | paaZ | oxepin‑CoA hydrolase/3‑oxo‑5,6‑dehydrosuberyl‑CoA semialdehyde dehydrogenase | |||||
| * | ? | AE015451 | 3775312 = | 38 (0.950) | 3 (0.080) | 3/318 | NT | 8.1% | coding (165/453 nt) | PP_3336 | conserved protein of unknown function |
| ? | AE015451 | 3775340 = | 32 (0.850) | coding (137/453 nt) | PP_3336 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 3855028 = | 36 (0.900) | 4 (0.110) | 4/320 | NT | 10.1% | coding (175/888 nt) | PP_3403 | putative Quercetin 2,3‑dioxygenase |
| ? | AE015451 | 3855078 = | 37 (0.970) | coding (125/888 nt) | PP_3403 | putative Quercetin 2,3‑dioxygenase | |||||
| * | ? | AE015451 | 3921023 = | 38 (0.950) | 3 (0.080) | 3/318 | NT | 9.1% | coding (743/1689 nt) | acs | Butyrate‑‑CoA ligase |
| ? | AE015451 | 3921136 = | 24 (0.630) | coding (630/1689 nt) | acs | Butyrate‑‑CoA ligase | |||||
| * | ? | AE015451 | = 3970610 | NA (NA) | 4 (0.110) | 4/304 | NT | NA | coding (529/1536 nt) | PP_3501 | transposase |
| ? | AE015451 | = 3970594 | NA (NA) | coding (513/1536 nt) | PP_3501 | transposase | |||||
| * | ? | AE015451 | = 3981024 | 32 (0.800) | 4 (0.110) | 4/320 | NT | 11.0% | coding (678/1068 nt) | cobW | Protein CobW |
| ? | AE015451 | = 3981044 | 34 (0.890) | coding (658/1068 nt) | cobW | Protein CobW | |||||
| * | ? | AE015451 | 4001760 = | 34 (0.850) | 3 (0.080) | 3/300 | NT | 9.6% | intergenic (+77/‑57) | dmoA‑II/allE | dimethyl‑sulfide monooxygenase/putative S‑ureidoglycine aminohydrolase |
| ? | AE015451 | 4001778 = | 26 (0.730) | intergenic (+95/‑39) | dmoA‑II/allE | dimethyl‑sulfide monooxygenase/putative S‑ureidoglycine aminohydrolase | |||||
| * | ? | AE015451 | = 4022305 | 22 (0.550) | 5 (0.130) | 4/316 | NT | 19.0% | coding (1/942 nt) | PP_3547 | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain |
| ? | AE015451 | 4022806 = | 22 (0.590) | intergenic (‑501/+167) | PP_3547/emrB | putative NAD(P)‑binding oxidoreductase with NAD(P)‑binding Rossmann‑fold domain/multidrug efflux transport system ‑ permease subunit | |||||
| * | ? | AE015451 | = 4094253 | 26 (0.650) | 3 (0.080) | 3/326 | NT | 10.5% | coding (1250/1581 nt) | PP_3602 | 2,5‑dioxovalerate dehydrogenase |
| ? | AE015451 | = 4094261 | 26 (0.670) | coding (1258/1581 nt) | PP_3602 | 2,5‑dioxovalerate dehydrogenase | |||||
| * | ? | AE015451 | 4160431 = | 34 (0.850) | 3 (0.080) | 3/320 | NT | 9.6% | coding (1171/1374 nt) | PP_3662 | conserved protein of unknown function |
| ? | AE015451 | 4160597 = | 24 (0.630) | coding (1337/1374 nt) | PP_3662 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 4173021 | 29 (0.730) | 3 (0.080) | 3/318 | NT | 8.8% | coding (655/825 nt) | PP_3671 | Oxidoreductase, aldo/keto reductase family |
| ? | AE015451 | = 4173051 | 35 (0.930) | coding (685/825 nt) | PP_3671 | Oxidoreductase, aldo/keto reductase family | |||||
| * | ? | AE015451 | 4240151 = | 41 (1.030) | 4 (0.110) | 3/312 | NT | 9.7% | coding (139/900 nt) | PP_3717 | Transcriptional regulator, LuxR family |
| ? | AE015451 | 4240192 = | 36 (0.970) | coding (98/900 nt) | PP_3717 | Transcriptional regulator, LuxR family | |||||
| * | ? | AE015451 | 4261390 = | 30 (0.750) | 3 (0.080) | 3/312 | NT | 11.1% | coding (1372/2460 nt) | PP_3734 | putative ABC transporter, permease protein |
| ? | AE015451 | 4261506 = | 20 (0.540) | coding (1256/2460 nt) | PP_3734 | putative ABC transporter, permease protein | |||||
| * | ? | AE015451 | 4375240 = | 49 (1.230) | 3 (0.080) | 3/312 | NT | 6.2% | coding (60/264 nt) | PP_3850 | conserved protein of unknown function |
| ? | AE015451 | 4375362 = | 46 (1.240) | coding (174/258 nt) | PP_5637 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 4408994 | 42 (1.050) | 5 (0.130) | 5/314 | NT | 12.0% | coding (1320/1398 nt) | PP_3893 | putative Phage DNA helicase |
| ? | AE015451 | = 4409046 | 34 (0.910) | coding (1268/1398 nt) | PP_3893 | putative Phage DNA helicase | |||||
| * | ? | AE015451 | 4525558 = | 28 (0.700) | 3 (0.080) | 3/330 | NT | 8.8% | coding (489/1125 nt) | mnmA | tRNA‑specific 2‑thiouridylase MnmA |
| ? | AE015451 | 4525653 = | 35 (0.890) | coding (584/1125 nt) | mnmA | tRNA‑specific 2‑thiouridylase MnmA | |||||
| * | ? | AE015451 | 4545296 = | 50 (1.250) | 3 (0.080) | 3/316 | NT | 6.1% | coding (510/1284 nt) | hyuC | N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase 2 |
| ? | AE015451 | 4545329 = | 45 (1.200) | coding (477/1284 nt) | hyuC | N‑carbamoyl‑beta‑alanine amidohydrolase/allantoine amidohydrolase 2 | |||||
| * | ? | AE015451 | 4562960 = | 46 (1.150) | 3 (0.080) | 3/322 | NT | 6.4% | coding (901/2316 nt) | vgrG‑III | type 6 secretion system protein |
| ? | AE015451 | 4563127 = | 44 (1.150) | coding (734/2316 nt) | vgrG‑III | type 6 secretion system protein | |||||
| * | ? | AE015451 | = 4565258 | 35 (0.880) | 4 (0.110) | 4/320 | NT | 11.1% | coding (501/1560 nt) | glgA | glycogen synthase |
| ? | AE015451 | = 4565305 | 31 (0.810) | coding (548/1560 nt) | glgA | glycogen synthase | |||||
| * | ? | AE015451 | = 4581891 | 46 (1.150) | 4 (0.110) | 4/316 | NT | 8.6% | coding (1537/3321 nt) | treSB | fused trehalose synthase B/maltokinase |
| ? | AE015451 | = 4582002 | 42 (1.120) | coding (1426/3321 nt) | treSB | fused trehalose synthase B/maltokinase | |||||
| * | ? | AE015451 | = 4653677 | 41 (1.030) | 3 (0.080) | 3/316 | NT | 6.6% | coding (155/1326 nt) | aceA | isocitrate lyase |
| ? | AE015451 | = 4653754 | 46 (1.220) | coding (232/1326 nt) | aceA | isocitrate lyase | |||||
| * | ? | AE015451 | 4660282 = | 27 (0.680) | 4 (0.110) | 4/316 | NT | 13.0% | coding (640/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F |
| ? | AE015451 | 4660363 = | 28 (0.750) | coding (721/1362 nt) | nuoF | NADH‑quinone oxidoreductase subunit F | |||||
| * | ? | AE015451 | 4671163 = | 34 (0.850) | 3 (0.090) | 3/280 | NT | 9.8% | intergenic (+25/+66) | nuoN/PP_4132 | NADH‑quinone oxidoreductase subunit N/conserved protein of unknown function |
| ? | AE015451 | 4671191 = | 27 (0.810) | intergenic (+53/+38) | nuoN/PP_4132 | NADH‑quinone oxidoreductase subunit N/conserved protein of unknown function | |||||
| * | ? | AE015451 | = 4681791 | 51 (1.280) | 5 (0.130) | 5/318 | NT | 9.2% | coding (81/1431 nt) | mltD | Membrane‑bound lytic murein transglycosylase D |
| ? | AE015451 | = 4681800 | 50 (1.320) | coding (90/1431 nt) | mltD | Membrane‑bound lytic murein transglycosylase D | |||||
| * | ? | AE015451 | = 4703646 | 43 (1.080) | 3 (0.080) | 3/320 | NT | 8.1% | coding (1518/1695 nt) | kdpA | potassium‑transporting ATPase A chain |
| ? | AE015451 | = 4703753 | 27 (0.710) | coding (1411/1695 nt) | kdpA | potassium‑transporting ATPase A chain | |||||
| * | ? | AE015451 | = 4715992 | 38 (0.950) | 3 (0.080) | 3/318 | NT | 7.7% | coding (1223/1932 nt) | PP_4173 | Sensor histidine kinase/response regulator |
| ? | AE015451 | = 4716028 | 36 (0.950) | coding (1259/1932 nt) | PP_4173 | Sensor histidine kinase/response regulator | |||||
| * | ? | AE015451 | 4744224 = | 62 (1.550) | 3 (0.080) | 3/320 | NT | 5.2% | coding (602/813 nt) | PP_4198 | OmpA family protein |
| ? | AE015451 | 4744275 = | 50 (1.310) | coding (551/813 nt) | PP_4198 | OmpA family protein | |||||
| * | ? | AE015451 | 4808174 = | 0 (0.000) | 4 (0.130) | 4/266 | NT | 32.0% | intergenic (‑283/‑272) | PP_4234/dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | AE015451 | = 5988935 | 17 (0.540) | intergenic (+229/‑317) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | AE015451 | = 4808179 | 0 (0.000) | 17 (0.460) | 11/312 | NT | 63.0% | intergenic (‑288/‑267) | PP_4234/dsbD‑II | Aldehyde oxidase and xanthine dehydrogenase/thiol/disulfide interchange protein 2 |
| ? | AE015451 | 5988765 = | 20 (0.540) | intergenic (+59/‑487) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | AE015451 | = 4825395 | 59 (1.480) | 3 (0.080) | 3/324 | NT | 5.1% | coding (5795/12954 nt) | pvdL | non‑ribosomal peptide synthase (subunit of ferribactin synthase) |
| ? | AE015451 | = 4825407 | 55 (1.430) | coding (5783/12954 nt) | pvdL | non‑ribosomal peptide synthase (subunit of ferribactin synthase) | |||||
| * | ? | AE015451 | = 4845609 | 24 (0.600) | 3 (0.080) | 3/320 | NT | 12.0% | coding (359/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase |
| ? | AE015451 | 4846279 = | 21 (0.550) | coding (1029/2475 nt) | PP_4261 | cation‑transporting P‑type ATPase | |||||
| * | ? | AE015451 | = 4908036 | 23 (0.580) | 3 (0.080) | 3/316 | NT | 9.7% | intergenic (‑12/‑270) | PP_4317/PP_4318 | conserved protein of unknown function/transposase |
| ? | AE015451 | 4909961 = | 34 (0.900) | intergenic (+354/+125) | PP_4318/PP_4319 | transposase/conserved exported protein of unknown function | |||||
| * | ? | AE015451 | 4913709 = | 22 (0.550) | 4 (0.110) | 4/316 | NT | 17.5% | coding (990/1989 nt) | ccmF | holocytochrome c synthetase |
| ? | AE015451 | 4913769 = | 17 (0.450) | coding (930/1989 nt) | ccmF | holocytochrome c synthetase | |||||
| * | ? | AE015451 | = 4933879 | 29 (0.730) | 5 (0.140) | 5/304 | NT | 16.1% | coding (570/1308 nt) | flhF | Flagellar biosynthesis protein FlhF |
| ? | AE015451 | = 4933863 | 26 (0.720) | coding (586/1308 nt) | flhF | Flagellar biosynthesis protein FlhF | |||||
| * | ? | AE015451 | = 4945203 | 22 (0.550) | 4 (0.110) | 4/318 | NT | 11.1% | intergenic (+563/+235) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
| ? | AE015451 | 4945621 = | 43 (1.140) | coding (960/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein | |||||
| * | ? | AE015451 | = 4945208 | 22 (0.550) | 6 (0.160) | 6/322 | NT | 17.9% | intergenic (+568/+230) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
| ? | AE015451 | 4945400 = | 34 (0.890) | intergenic (+760/+38) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein | |||||
| * | ? | AE015451 | = 4945209 | 22 (0.550) | 7 (0.190) | 7/318 | NT | 19.2% | intergenic (+569/+229) | PP_5673/flhB | putative D‑alanine‑‑D‑alanine ligase/flagellin export apparatus, substrate specificity protein |
| ? | AE015451 | 4945455 = | 38 (1.000) | coding (1126/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein | |||||
| * | ? | AE015451 | 4980231 = | 32 (0.800) | 3 (0.080) | 3/316 | NT | 10.7% | intergenic (‑22/+139) | flgF/PP_4387 | flagellar basal‑body rod protein FlgF/conserved exported protein of unknown function |
| ? | AE015451 | 4980313 = | 20 (0.530) | intergenic (‑104/+57) | flgF/PP_4387 | flagellar basal‑body rod protein FlgF/conserved exported protein of unknown function | |||||
| * | ? | AE015451 | = 5053079 | 44 (1.100) | 3 (0.080) | 3/316 | NT | 6.6% | coding (1372/1833 nt) | gsiA | glutathione ABC transporter ATP‑binding subunit |
| ? | AE015451 | = 5053112 | 44 (1.170) | coding (1339/1833 nt) | gsiA | glutathione ABC transporter ATP‑binding subunit | |||||
| * | ? | AE015451 | 5126515 = | 34 (0.850) | 3 (0.080) | 3/322 | NT | 8.4% | coding (68/2187 nt) | PP_4514 | putative esterase of the alpha‑beta hydrolase superfamily |
| ? | AE015451 | 5126536 = | 33 (0.860) | coding (89/2187 nt) | PP_4514 | putative esterase of the alpha‑beta hydrolase superfamily | |||||
| * | ? | AE015451 | = 5182665 | 54 (1.350) | 3 (0.080) | 3/316 | NT | 5.7% | coding (155/381 nt) | PP_4562 | conserved protein of unknown function |
| ? | AE015451 | = 5182799 | 49 (1.300) | coding (289/381 nt) | PP_4562 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5221246 | 37 (0.930) | 3 (0.080) | 3/320 | NT | 7.8% | coding (372/888 nt) | PP_4601 | Transcriptional regulator, LysR family |
| ? | AE015451 | = 5221248 | 36 (0.950) | coding (374/888 nt) | PP_4601 | Transcriptional regulator, LysR family | |||||
| * | ? | AE015451 | 5234910 = | 16 (0.400) | 3 (0.080) | 3/318 | NT | 12.0% | coding (244/2325 nt) | fecA | outer membrane ferric citrate porin |
| ? | AE015451 | 5235001 = | 29 (0.770) | coding (335/2325 nt) | fecA | outer membrane ferric citrate porin | |||||
| * | ? | AE015451 | = 5257870 | 15 (0.380) | 3 (0.080) | 3/308 | NT | 16.3% | intergenic (‑69/+75) | PP_4634/PP_4635 | putative hydrolase, alpha/beta fold family/trans‑2‑enoyl‑CoA reductase (NAD(+)) |
| ? | AE015451 | = 5257913 | 17 (0.460) | intergenic (‑112/+32) | PP_4634/PP_4635 | putative hydrolase, alpha/beta fold family/trans‑2‑enoyl‑CoA reductase (NAD(+)) | |||||
| * | ? | AE015451 | = 5325153 | 40 (1.000) | 4 (0.110) | 4/308 | NT | 9.7% | coding (66/279 nt) | PP_4685 | conserved protein of unknown function |
| ? | AE015451 | = 5325139 | 38 (1.040) | coding (52/279 nt) | PP_4685 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 5331195 = | 35 (0.880) | 3 (0.080) | 3/314 | NT | 9.7% | coding (366/1173 nt) | PP_4692 | putative aspartate/tyrosine/aromatic aminotransferase |
| ? | AE015451 | 5331241 = | 23 (0.620) | coding (320/1173 nt) | PP_4692 | putative aspartate/tyrosine/aromatic aminotransferase | |||||
| * | ? | AE015451 | = 5433680 | 24 (0.600) | 3 (0.080) | 3/320 | NT | 10.2% | coding (1584/2529 nt) | hrpB | ATP‑dependent helicase HrpB |
| ? | AE015451 | = 5433711 | 30 (0.790) | coding (1553/2529 nt) | hrpB | ATP‑dependent helicase HrpB | |||||
| * | ? | AE015451 | = 5435853 | 53 (1.330) | 6 (0.160) | 6/318 | NT | 11.6% | coding (32/873 nt) | fieF | divalent cation efflux transporter |
| ? | AE015451 | = 5435909 | 41 (1.080) | coding (88/873 nt) | fieF | divalent cation efflux transporter | |||||
| * | ? | AE015451 | = 5509910 | 42 (1.050) | 9 (0.260) | 8/296 | NT | 18.8% | coding (109/1488 nt) | urtB | putative Urea ABC transporter |
| ? | AE015451 | = 5509890 | 41 (1.170) | coding (89/1488 nt) | urtB | putative Urea ABC transporter | |||||
| * | ? | AE015451 | 5545321 = | NA (NA) | 21 (0.530) | 17/332 | NT | 51.5% | intergenic (‑461/+416) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine‑2'‑O‑)‑methyltransferase RlmB |
| ? | AE015451 | = 5621245 | 20 (0.500) | coding (19/774 nt) | PP_4939 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5545666 | NA (NA) | 16 (0.410) | 13/330 | NT | 44.9% | intergenic (‑806/+71) | rpsF/rlmB | 30S ribosomal protein S6/23S rRNA (guanosine‑2'‑O‑)‑methyltransferase RlmB |
| ? | AE015451 | 5621244 = | 20 (0.500) | coding (20/774 nt) | PP_4939 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5554410 | 61 (1.530) | 7 (0.190) | 7/314 | NT | 10.8% | coding (486/546 nt) | PP_4886 | conserved protein of unknown function |
| ? | AE015451 | = 5554486 | 59 (1.580) | coding (410/546 nt) | PP_4886 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5612014 | 34 (0.850) | 5 (0.130) | 5/320 | NT | 13.1% | coding (1008/1176 nt) | PP_4931 | conserved protein of unknown function |
| ? | AE015451 | = 5612017 | 34 (0.890) | coding (1011/1176 nt) | PP_4931 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5631962 | 57 (1.430) | 3 (0.080) | 3/326 | NT | 5.1% | coding (1492/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| ? | AE015451 | = 5632005 | 57 (1.470) | coding (1535/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase | |||||
| * | ? | AE015451 | = 5643374 | 46 (1.150) | 3 (0.080) | 3/322 | NT | 6.2% | coding (37/1182 nt) | yhiN | putative oxidoreductase with FAD/NAD(P)‑binding domain |
| ? | AE015451 | = 5643375 | 47 (1.230) | coding (38/1182 nt) | yhiN | putative oxidoreductase with FAD/NAD(P)‑binding domain | |||||
| * | ? | AE015451 | 5680623 = | 40 (1.000) | 6 (0.160) | 4/324 | NT | 13.7% | coding (679/720 nt) | rsmE | 16S rRNA m3U1498 methyltransferase |
| ? | AE015451 | 5680692 = | 37 (0.960) | coding (591/618 nt) | PP_4986 | Channel protein, hemolysin III family | |||||
| * | ? | AE015451 | 5783602 = | 42 (1.050) | 4 (0.100) | 4/322 | NT | 10.0% | coding (2077/3309 nt) | kefA | mechanosensitive channel protein, intermediate (smaller, MscS‑like) conductance, K+ efflux |
| ? | AE015451 | 5783631 = | 32 (0.840) | coding (2106/3309 nt) | kefA | mechanosensitive channel protein, intermediate (smaller, MscS‑like) conductance, K+ efflux | |||||
| * | ? | AE015451 | 5825393 = | 58 (1.450) | 3 (0.080) | 3/322 | NT | 5.8% | coding (80/723 nt) | trmB | tRNA (guanine‑N(7)‑)‑methyltransferase |
| ? | AE015451 | 5825416 = | 41 (1.070) | coding (57/723 nt) | trmB | tRNA (guanine‑N(7)‑)‑methyltransferase | |||||
| * | ? | AE015451 | 5827746 = | 53 (1.330) | 3 (0.080) | 3/320 | NT | 5.6% | coding (659/711 nt) | mtgA | Monofunctional biosynthetic peptidoglycan transglycosylase |
| ? | AE015451 | 5827764 = | 51 (1.340) | coding (677/711 nt) | mtgA | Monofunctional biosynthetic peptidoglycan transglycosylase | |||||
| * | ? | AE015451 | = 5837228 | 51 (1.280) | 3 (0.080) | 3/326 | NT | 5.5% | coding (29/1371 nt) | PP_5116 | conserved protein of unknown function |
| ? | AE015451 | = 5837254 | 53 (1.370) | coding (55/1371 nt) | PP_5116 | conserved protein of unknown function | |||||
| * | ? | AE015451 | 5838089 = | 45 (1.130) | 3 (0.080) | 3/322 | NT | 6.2% | coding (890/1371 nt) | PP_5116 | conserved protein of unknown function |
| ? | AE015451 | 5838127 = | 48 (1.250) | coding (928/1371 nt) | PP_5116 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5857689 | 25 (0.630) | 4 (0.100) | 4/322 | NT | 13.6% | coding (238/1371 nt) | PP_5134 | conserved protein of unknown function |
| ? | AE015451 | = 5857694 | 27 (0.710) | coding (243/1371 nt) | PP_5134 | conserved protein of unknown function | |||||
| * | ? | AE015451 | = 5881075 | 43 (1.080) | 3 (0.080) | 3/318 | NT | 5.7% | coding (164/1368 nt) | PP_5154 | putative Oxidoreductase, FAD‑binding |
| ? | AE015451 | = 5881138 | 59 (1.560) | coding (101/1368 nt) | PP_5154 | putative Oxidoreductase, FAD‑binding | |||||
| * | ? | AE015451 | 5926821 = | 33 (0.830) | 4 (0.110) | 4/320 | NT | 11.2% | coding (1074/1623 nt) | PP_5195 | putative Iron ABC transporter, permease protein |
| ? | AE015451 | 5926859 = | 32 (0.840) | coding (1036/1623 nt) | PP_5195 | putative Iron ABC transporter, permease protein | |||||
| * | ? | AE015451 | = 5950286 | 35 (0.880) | 3 (0.080) | 3/326 | NT | 7.2% | coding (1003/1503 nt) | ppx | exopolyphosphatase |
| ? | AE015451 | = 5950293 | 43 (1.110) | coding (1010/1503 nt) | ppx | exopolyphosphatase | |||||
| * | ? | AE015451 | = 5956204 | 25 (0.630) | 3 (0.080) | 3/318 | NT | 10.6% | coding (263/489 nt) | PP_5221 | conserved protein of unknown function, UPF0178 family |
| ? | AE015451 | = 5956270 | 27 (0.710) | coding (197/489 nt) | PP_5221 | conserved protein of unknown function, UPF0178 family | |||||
| * | ? | AE015451 | = 5988668 | 34 (0.850) | 8 (0.210) | 8/322 | NT | 24.4% | coding (1750/1788 nt) | kefB‑III | glutathione‑regulated potassium/H+ antiporter |
| ? | AE015451 | 5988956 = | 17 (0.440) | intergenic (+250/‑296) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | AE015451 | = 5988757 | 20 (0.500) | 3 (0.080) | 3/320 | NT | 14.3% | intergenic (+51/‑495) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| ? | AE015451 | 5988979 = | 17 (0.450) | intergenic (+273/‑273) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | AE015451 | = 5988759 | 20 (0.500) | 6 (0.160) | 6/322 | NT | 24.9% | intergenic (+53/‑493) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| ? | AE015451 | 5988951 = | 17 (0.440) | intergenic (+245/‑301) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | AE015451 | = 5988771 | 20 (0.500) | 5 (0.130) | 5/320 | NT | 21.7% | intergenic (+65/‑481) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| ? | AE015451 | 5988963 = | 17 (0.450) | intergenic (+257/‑289) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA | |||||
| * | ? | AE015451 | = 6026867 | 23 (0.580) | 3 (0.080) | 3/316 | NT | 11.4% | coding (990/1140 nt) | PP_5277 | Major facilitator family transporter |
| ? | AE015451 | = 6026883 | 25 (0.670) | coding (974/1140 nt) | PP_5277 | Major facilitator family transporter | |||||
| * | ? | AE015451 | = 6130112 | 64 (1.600) | 4 (0.110) | 4/318 | NT | 6.2% | coding (321/783 nt) | PP_5378 | putative metal‑binding protein |
| ? | AE015451 | = 6130113 | 61 (1.610) | coding (320/783 nt) | PP_5378 | putative metal‑binding protein | |||||
| * | ? | AE015451 | 6177506 = | 36 (0.900) | 3 (0.080) | 3/318 | NT | 8.7% | intergenic (‑22/+27) | atpG/atpA | ATP synthase gamma chain/ATP synthase subunit alpha |
| ? | AE015451 | 6177528 = | 29 (0.770) | intergenic (‑44/+5) | atpG/atpA | ATP synthase gamma chain/ATP synthase subunit alpha | |||||