Tue Feb 21 13:57:08 2023

/usr/bin/breseq-0.35.4-Linux-x86_64/bin/breseq -j 2 --consensus-frequency-cutoff=0.75 --require-match-fraction=0.95 -o breseq_processes/0 -r /var/data/U00096_3.gb /var/alemutpipe-outputs/good/SRR12717901_R1.good.fq /var/alemutpipe-outputs/good/SRR12717901_R2.good.fq