New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_012967 | 1882606 = | 30 (0.100) | 329 (1.150) | 126/142 | 0.0 | 91.6% | coding (133/852 nt) | manZ | PTS mannose transporter subunit IID |
? | NC_012967 | = 1882610 | NA (NA) | coding (137/852 nt) | manZ | PTS mannose transporter subunit IID |
Only 100 of 366 total aligned reads displayed.
TCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCAC > NC_012967/1882535‑1882677 | tCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTtct < 1:9229392/72‑1 (MQ=255) ctgcgttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatt < 2:5211812‑M1/1‑1 (MQ=255) ctgcgttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatt > 1:6160391‑M1/72‑72 (MQ=255) cTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTtctc > 2:49282/1‑72 (MQ=255) ttCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTctct > 1:1479719/1‑72 (MQ=255) gcgttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctattct < 2:2500141‑M1/3‑1 (MQ=255) tCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTa < 2:9538534/72‑1 (MQ=255) tCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTa < 1:9017026/72‑1 (MQ=255) tCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTa < 2:9614429/72‑1 (MQ=255) cgttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctattcta > 2:4541988‑M1/69‑72 (MQ=255) cgttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctattcta < 1:5727441‑M1/4‑1 (MQ=255) gttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctattctat < 2:3946196‑M1/5‑1 (MQ=255) gttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctattctat > 2:9883460‑M1/68‑72 (MQ=255) gttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctattctat < 1:7744041‑M1/5‑1 (MQ=255) ccggCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTAt < 1:8585083/69‑1 (MQ=255) ttctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggcttctgcttctctatTCTATg < 2:6546498‑M1/6‑1 (MQ=255) ttctaacctcctccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATg > 1:6477783‑M1/67‑72 (MQ=255) gtctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATg > 2:3458864‑M1/67‑72 (MQ=255) tctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttntgcttctctatTCTATgg < 1:3816051‑M1/7‑1 (MQ=255) tctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATgg > 2:6731685‑M1/66‑72 (MQ=255) ctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGt < 2:2074344‑M1/8‑1 (MQ=255) ctaacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGt > 2:6134365‑M1/65‑72 (MQ=255) taacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTa > 2:3134921‑M1/64‑72 (MQ=255) taacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTa > 2:3609236‑M1/64‑72 (MQ=255) tacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTAc < 1:5061992‑M1/10‑1 (MQ=255) aacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttcttcttctctatTCTATGGTAc > 1:5176829‑M1/63‑72 (MQ=255) aacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTAc > 2:4636028‑M1/63‑72 (MQ=255) aacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTAc < 1:4748169‑M1/10‑1 (MQ=255) aacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTAc > 1:9196330‑M1/63‑72 (MQ=255) aacctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTAc > 2:7942042‑M1/63‑72 (MQ=255) cctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCg > 1:5601922‑M1/61‑72 (MQ=255) cctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCg > 2:6905519‑M1/61‑72 (MQ=255) ctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCgg < 2:142071‑M1/13‑1 (MQ=255) ctcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCgg < 2:1207926‑M1/13‑1 (MQ=255) tcttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGc > 2:4263284‑M1/59‑72 (MQ=255) cttccaggcttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCa < 2:3732067‑M1/15‑1 (MQ=255) ttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCaa < 1:2856290‑M1/16‑1 (MQ=255) ttccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCaa < 1:8101900‑M1/16‑1 (MQ=255) tccagtgttcatggaacttcgaacgtatgcaggcactgggtttctccttctctatTCTATGTTACCGGCAAt > 2:9702399‑M1/56‑72 (MQ=255) tccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAAt > 1:3057872‑M1/56‑72 (MQ=255) tccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcgtctctatTCTATGGTACCGGCAAt > 2:5701082‑M1/56‑72 (MQ=255) ccagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAAtt > 1:1819570‑M1/55‑72 (MQ=255) cagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtc < 2:3310034‑M1/19‑1 (MQ=255) cagggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtc > 2:8445253‑M1/54‑72 (MQ=255) aggtttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtcg > 2:7794286‑M1/53‑72 (MQ=255) agggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtcg < 1:7878285‑M1/20‑1 (MQ=255) gggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtcgt < 2:2282626‑M1/21‑1 (MQ=255) gggttcatggaacttcgaacgtangcaggcactgggtttctgcttctctatTCTATGGTACCGGCGCTtcgt < 1:6369173‑M1/21‑1 (MQ=255) ggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtcgtc > 1:2179365‑M1/51‑72 (MQ=255) ggttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtcgtc > 1:7234282‑M1/51‑72 (MQ=255) gttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATtcgtcg < 2:5113534‑M1/23‑1 (MQ=255) ttcatggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCTTCGc < 1:1427130‑M1/24‑1 (MQ=255) atggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCctc < 1:9937161‑M1/27‑1 (MQ=255) atggaacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCctc < 1:6786472‑M1/27‑1 (MQ=255) aacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTAcc < 2:5835864‑M1/31‑1 (MQ=255) aacttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTAcc < 1:7124767‑M1/31‑1 (MQ=255) acttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTAccc > 2:7758816‑M1/41‑72 (MQ=255) actgcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTAccc > 2:2652193‑M1/41‑72 (MQ=255) ttcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTg > 2:476446‑M1/39‑72 (MQ=255) tcgaacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTga < 1:398636‑M1/35‑1 (MQ=255) aacgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGaa < 1:8246567‑M1/38‑1 (MQ=255) cgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGaaca > 1:4896329‑M1/33‑72 (MQ=255) cgtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGaaca < 1:2572511‑M1/40‑1 (MQ=255) gtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGaacaa < 1:7374715‑M1/41‑1 (MQ=255) gtatgcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGaacaa < 1:8906999‑M1/41‑1 (MQ=255) gcaggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGaa > 1:4056465‑M1/28‑72 (MQ=255) cgggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAg > 1:1006734‑M1/27‑72 (MQ=255) aggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGc < 2:5423713‑M1/47‑1 (MQ=255) ggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCt > 2:8175921‑M1/25‑72 (MQ=255) ggcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCt > 2:8720847‑M1/25‑72 (MQ=255) cgcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCt > 2:7194625‑M1/25‑72 (MQ=255) gcactgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTc < 1:9320789‑M1/49‑1 (MQ=255) actgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGCAGCTCGt < 1:2294431‑M1/51‑1 (MQ=255) actgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGt < 1:9488946‑M1/51‑1 (MQ=255) actgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGt > 1:5502917‑M1/22‑72 (MQ=255) ctgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTa < 2:8001492‑M1/52‑1 (MQ=255) ctgggtttctgcttctctatTCTATGGTACCGGCAATTCGACGCCTCTACCCTGAGAACAACGAAGCTCGTa < 1:327592‑M1/52‑1 (MQ=255) tgggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTaa > 2:9045266‑M1/20‑72 (MQ=255) ggtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAAc > 2:1355515‑M1/18‑72 (MQ=255) gtttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACa > 1:9780945‑M1/17‑72 (MQ=255) tttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACaa < 2:1473546‑M1/57‑1 (MQ=255) tttctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACaa < 2:1747720‑M1/57‑1 (MQ=255) tctgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGc < 2:630469‑M1/59‑1 (MQ=255) tgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTa < 1:7961944‑M1/61‑1 (MQ=255) tgcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTa > 1:5323756‑M1/12‑72 (MQ=255) gcttctctatTCTATGGTACNGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTAt > 1:3725864‑M1/11‑72 (MQ=255) gcttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTAt > 2:8959744‑M1/11‑72 (MQ=255) gcttctctatTCGATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTAt > 1:423240‑M1/11‑72 (MQ=255) cttctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTAtt > 2:9361234‑M1/10‑72 (MQ=255) cttctctatTCTATGGTACCGGCAATCCGTCGCCTCTACCCTGAGAACAACCAAGCTCGTAAACAAGCTAtt < 2:7389758‑M1/63‑1 (MQ=255) tctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCg < 1:5435429‑M1/65‑1 (MQ=255) tctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCGGAGAACAACGAAGCTCGTAAACAAGCTATTCg > 1:591322‑M1/8‑72 (MQ=255) nctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCg > 1:1145441‑M1/8‑72 (MQ=255) ctctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACNACGAAGCTCGTCAACAAGCTATTCGc < 2:1065856‑M1/66‑1 (MQ=255) tctatTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGcc < 2:6655761‑M1/67‑1 (MQ=255) atTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTc > 2:9411292‑M1/3‑72 (MQ=255) atTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTc < 1:4435638‑M1/70‑1 (MQ=255) tTCTATGGTACCGGCAANTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCa < 1:883503‑M1/71‑1 (MQ=255) tTCTATGGAACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCa > 2:9237209‑M1/2‑72 (MQ=255) tctATGGTACCGGCAATTCGTCGCCTATACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCAc < 1:2145490/72‑1 (MQ=255) | TCTTCCTGCGTTCTAACCTCTTCCAGGGTTCATGGAACTTCGAACGTATGCAGGCACTGGGTTTCTGCTTCTCTATGGTACCGGCAATTCGTCGCCTCTACCCTGAGAACAACGAAGCTCGTAAACAAGCTATTCGCCGTCAC > NC_012967/1882535‑1882677 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |