| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_012967 | 1,881,835 | (GGTACGCTGGAAATGA)1→2 | coding (175/801 nt) | manY → | PTS mannose transporter subunit IIC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | 1881820 = | 76 (0.300) | 317 (1.250) | 129/142 | 0.0 | 81.4% | coding (160/801 nt) | manY | PTS mannose transporter subunit IIC |
| ? | NC_012967 | = 1881835 | 69 (0.270) | coding (175/801 nt) | manY | PTS mannose transporter subunit IIC | |||||
Only 100 of 317 total aligned reads displayed.
GCCAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/1881890‑1881820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTACAC < NC_012967/1881835‑1881765 GCCAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCT < 2:8994334/72‑1GCCAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCT > 1:6777812/1‑72GCCAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCT < 2:6983956/72‑1 CCAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTC > 1:252560/1‑72 CAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCA > 2:1173355/1‑72 CAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGACCATTTCCAGCGTACCTCA > 1:3050314/1‑72 GAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATT > 1:646469/1‑72 GAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATT > 2:5146213/1‑72 AGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTc > 2:3427342/1‑71 GCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTC < 1:1546403/72‑1 GCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTC > 2:2914973/1‑72 CGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCC > 2:6684993/1‑72 CGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCC < 1:7976343/72‑1 CGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCC < 2:6552773/72‑1 GGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCCTTTACAGCGTACCTCATTTACA > 2:2791423/1‑72 CGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGC > 2:7505540/1‑72 CGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGC < 2:2423105/72‑1 GTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCG < 2:4616726/72‑1 GTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCG > 1:8710636/1‑72 TCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGT < 2:5458951/72‑1 CAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTA > 1:7193204/1‑72 CAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTA > 1:5681340/1‑72 CAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTA < 1:8783012/72‑1 GGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACC < 2:8309007/72‑1 GGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACC < 1:1922336/72‑1 GGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACC < 2:4209504/72‑1 GGCGCAACGGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACC < 2:7302683/72‑1 GCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCA < 1:8157289/72‑1 GCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCA > 2:4772570/1‑72 CGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCAC < 1:5473719/72‑1 GCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACC < 2:4390839/72‑1 CAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCG > 2:1039538/1‑72 CAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCG > 1:1193012/1‑72 CAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCG > 1:3739746/1‑72 AACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGA < 1:3259875/72‑1 ACTGCAGCACCGATGTTCGTCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCGGCGTACCACCGAT < 1:2806104/72‑1 ACTGCAGCACCGATGTTCATCCAGCCCAGCNCGATCATTTCCAGNGTACCTCATTTCCAGCGTACCACCGAT < 1:448442/72‑1 ACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGAT > 1:3156552/1‑72 TGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAA < 1:2023138/72‑1 GCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAAT < 1:4371978/72‑1 GCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAAT > 1:8573268/1‑72 GCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAAT < 1:1729591/72‑1 CAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATA > 1:5057693/1‑72 AGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAA > 2:2718650/1‑72 AGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAA > 2:6165145/1‑72 GCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACAACCGATAATAAT > 2:8086780/1‑72 CACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATA > 1:5219593/1‑72 CACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATA < 1:214827/72‑1 CACCGAAGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCCCCGCTAATAATA > 2:3597705/1‑72 ACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATAC > 2:4821018/1‑72 ACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATAC < 2:4482324/72‑1 GATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGG > 2:8641683/1‑72 ATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGT < 1:3365378/72‑1 ATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGT < 2:8109883/72‑1 ATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGT > 1:7395144/1‑72 TGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTT < 1:4275655/72‑1 CAGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATC > 1:6910821/1‑72 AGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCC > 1:1622697/1‑72 AGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCC > 2:4962126/1‑72 AGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCC < 2:2570433/72‑1 AGCCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCC > 2:684139/1‑72 CCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCC < 2:3835165/72‑1 CCCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCC < 2:3965976/72‑1 CCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCA < 2:6000028/72‑1 CCAGCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCA < 1:8432270/72‑1 GCGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGA < 1:768583/72‑1 CGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAA < 2:8245662/72‑1 CGCGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAA > 1:151926/1‑72 CGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACG > 1:41695/1‑72 CGATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACG > 2:4039454/1‑72 GATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGA < 2:5852817/72‑1 GATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGA > 2:9105073/1‑72 GATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGA < 2:151926/72‑1 ATCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGAT > 2:1643356/1‑72 TCATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATA < 2:8460213/72‑1 CATTTCCAGCGTACCTCATTTCAAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATAC < 2:3333748/72‑1 ATTTCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACC < 1:6703087/72‑1 ATTTCCAGCGTACCTCATTGCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACC < 1:4642416/72‑1 TCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCAC > 1:8908737/1‑72 TCCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCAC > 2:8538403/1‑72 CCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACC < 1:2861416/72‑1 CCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACC < 2:3218608/72‑1 CCAGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACC < 1:592188/72‑1 AGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCNTATCCCCAAGAACGATACCCACCAG < 1:1017386/72‑1 AGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAG > 2:2156327/1‑72 AGCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAG > 2:7899676/1‑72 GCGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGG > 1:6194544/1‑72 CGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGG < 2:3078731/72‑1 CGTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGG > 1:7338466/1‑72 GTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGT < 1:7264476/72‑1 GTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGT < 1:9167067/72‑1 GTACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGT > 1:6298647/1‑72 TACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTA < 2:7240988/72‑1 TACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTA < 2:8867204/72‑1 TACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTA > 2:4312213/1‑72 ACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTAC < 1:4980979/72‑1 ACCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTAC > 2:8169246/1‑72 CCTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTACA < 1:3436774/72‑1 CTCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTACAC > 2:1334052/1‑72 CTCATTTCCAGCGGACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTACAC < 1:4113933/72‑1 GCCAGAGCGGCGTCAGGCGCAACTGCAGCACCGATGTTCATCCAGCCCAGCGCGATCATTTCCAGCGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_012967/1881890‑1881820‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATTTCCAGCGTACCACCGATAATAATACCGGTTTTCATATCCCCAAGAACGATACCCACCAGGGTACAC < NC_012967/1881835‑1881765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |