| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3652532 | NA (NA) | 249 (1.000) | 110/140 | 0.2 | 100% | intergenic (+25/+254) | ECB_RS25190/glyS | IS3‑like element IS150 family transposase/glycine‑‑tRNA ligase subunit beta |
| ? | NC_012967 | 3896274 = | 0 (0.000) | coding (690/1506 nt) | rbsA | ribose ABC transporter ATP‑binding protein RbsA | |||||
Only 100 of 266 total aligned reads displayed.
ATTTGCGATGACGTTACCGTTTTTCGTGATGGGCAATTTATTGCTGAGCGCGAAGTGGCATCACTGACCGAAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGG > NC_012967/3896203‑3896344 | gantccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca < 2:747645‑M2/1‑1 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca > 2:2259409‑M2/72‑72 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca < 1:7704005‑M2/1‑1 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca > 1:5645190‑M2/72‑72 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca > 2:8084318‑M2/72‑72 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca < 2:7875087‑M2/1‑1 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca < 1:3897821‑M2/1‑1 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca > 2:5193391‑M2/72‑72 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca < 2:6336021‑M2/1‑1 (MQ=255)gactccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtaca > 1:1824523‑M2/72‑72 (MQ=255) actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAg < 1:2304176‑M2/2‑1 (MQ=255) actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAg > 2:8911645‑M2/71‑72 (MQ=255) actccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAg > 2:1058871‑M2/71‑72 (MQ=255) ctccaattgaatatcggaatcagncctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGa > 1:5908799‑M2/70‑72 (MQ=255) ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGa > 1:3169175‑M2/70‑72 (MQ=255) ctccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGa < 2:2717169‑M2/3‑1 (MQ=255) ccaattgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGAtt > 1:6370455‑M2/68‑72 (MQ=255) attgaatatcggaatcagacctatatgcctcgtgttaaactgtccaactttttggggtcagtacAGATTCGc > 1:7284738‑M2/65‑72 (MQ=255) ttgaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCt > 1:609792‑M2/64‑72 (MQ=255) gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGa > 1:2237180‑M2/62‑72 (MQ=255) gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGa > 2:8239222‑M2/62‑72 (MQ=255) gaatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGa > 1:6916968‑M2/62‑72 (MQ=255) aatatctgaatcagacctatatgcctcgcgtttanctgtccaactttttggggtcagtacAGATTCGCTGAt > 1:496685‑M2/61‑72 (MQ=255) aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGAt > 1:6323513‑M2/61‑72 (MQ=255) aatatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGAt > 2:6954592‑M2/61‑72 (MQ=255) atatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGAtt > 2:8797544‑M2/60‑72 (MQ=255) tatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTg > 2:7283610‑M2/59‑72 (MQ=255) tatcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTg < 1:8333660‑M2/14‑1 (MQ=255) atcggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTga < 2:5063458‑M2/15‑1 (MQ=255) ggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAgat < 2:6238042‑M2/18‑1 (MQ=255) ggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAgat < 2:1176043‑M2/18‑1 (MQ=255) ggaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAgat < 2:1496892‑M2/18‑1 (MQ=255) gaatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAgatg > 1:2600282‑M2/54‑72 (MQ=255) aatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAgatga > 1:7100245‑M2/53‑72 (MQ=255) aatcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAgatga > 1:8606318‑M2/53‑72 (MQ=255) tcagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGatgatg < 2:5733334‑M2/22‑1 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtgg > 1:5260960‑M2/50‑72 (MQ=255) cagacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtgg > 1:745687‑M2/50‑72 (MQ=255) agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtggt < 1:8318887‑M2/24‑1 (MQ=255) agacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtggt < 2:8171894‑M2/24‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtggtg < 2:7491732‑M2/25‑1 (MQ=255) gacctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtggtg < 2:2000449‑M2/25‑1 (MQ=255) acctatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGAtggtgg > 2:3910085‑M2/47‑72 (MQ=255) tatatgcctcgtgtttaactgtccagctttttggggtcagtacAGATTCGCTGAGTGAGATGATGGTGGGTc < 1:783876‑M2/29‑1 (MQ=255) tatatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTc > 2:1819950‑M2/44‑72 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTcga > 1:2467825‑M2/42‑71 (MQ=255) tatgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGc < 1:6250211‑M2/31‑1 (MQ=255) tatgcctcgtgtataactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGc < 1:1497586‑M2/31‑1 (MQ=255) tgcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCaa > 1:7992321‑M2/40‑72 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAg > 2:2143212‑M2/39‑72 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAg > 2:1254948‑M2/39‑72 (MQ=255) gcctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAg > 1:5186496‑M2/39‑72 (MQ=255) cctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGc > 1:7525492‑M2/38‑72 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCt < 1:5501905‑M2/36‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCt < 1:2624822‑M2/36‑1 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCt > 2:4536331‑M2/37‑72 (MQ=255) ctcgtgtttaactgtccaactttttggggtcagtacAGATTCGATGATTGAGATGATGGTGGGTCGCAAGCt > 2:2074887‑M2/37‑72 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTg < 1:6710292‑M2/37‑1 (MQ=255) tcgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTg < 2:4184700‑M2/37‑1 (MQ=255) cgtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTgg > 1:4241666‑M2/35‑72 (MQ=255) gtgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGa < 2:7320520‑M2/39‑1 (MQ=255) tgtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGaa > 1:8770402‑M2/33‑72 (MQ=255) gtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAGGCTGGAAg > 2:6825059‑M2/32‑72 (MQ=255) gtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTggacg > 1:1414407‑M2/32‑70 (MQ=255) gtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAg > 2:1381039‑M2/32‑72 (MQ=255) gtttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAg > 1:4317581‑M2/32‑72 (MQ=255) tttaactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGa < 2:3712712‑M2/42‑1 (MQ=255) taactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATc > 2:5545168‑M2/29‑72 (MQ=255) taactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATc > 2:2910762‑M2/29‑72 (MQ=255) aactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTGGCAAGCTGGAAGCTCa > 1:4578293‑M2/28‑72 (MQ=255) aactgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCa < 1:1353306‑M2/45‑1 (MQ=255) actgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCaa > 2:8666547‑M2/27‑72 (MQ=255) actgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCaa > 2:7799393‑M2/27‑72 (MQ=255) actgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCaa > 2:6640001‑M2/27‑72 (MQ=255) ctgtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAat > 2:7734139‑M2/26‑72 (MQ=255) tgtccaactttttggggtcagtacAGAGTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAata < 1:1258766‑M2/48‑1 (MQ=255) gtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAatat > 1:8664871‑M2/24‑72 (MQ=255) gtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAatat > 1:2091373‑M2/24‑72 (MQ=255) gtccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAatat > 2:3602933‑M2/24‑72 (MQ=255) tccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATc > 2:6719256‑M2/23‑72 (MQ=255) ccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATcc < 1:1904331‑M2/51‑1 (MQ=255) ccaactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATcc > 1:9019598‑M2/22‑72 (MQ=255) caactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCg < 2:4701572‑M2/52‑1 (MQ=255) aactttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGc > 1:5735272‑M2/20‑72 (MQ=255) actttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCa > 1:7152144‑M2/19‑72 (MQ=255) ttttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCt < 2:4317580‑M2/57‑1 (MQ=255) tttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTg > 2:5761168‑M2/15‑72 (MQ=255) ttggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTgg < 2:3492402‑M2/59‑1 (MQ=255) tggggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGa > 2:9054767‑M2/13‑72 (MQ=255) gggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACa < 1:414803‑M2/62‑1 (MQ=255) ggtcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGAAAGCTGGAGGATCAATATCCGCACCGGGACaa > 1:94591‑M2/10‑72 (MQ=255) gtcagtacAGATTCGCTGNTTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACaaa < 1:3562260‑M2/64‑1 (MQ=255) gtcagtacAGATTCGCGGATTGAGAGGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACaaa < 2:1899974‑M2/64‑1 (MQ=255) tcagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAg < 2:2164639‑M2/65‑1 (MQ=255) cagtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAgc < 1:3246088‑M2/66‑1 (MQ=255) agtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAagcn > 1:1044368‑M2/6‑71 (MQ=255) gtacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAgcgc > 1:2838911‑M2/5‑72 (MQ=255) tacAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGcc < 2:4418321‑M2/69‑1 (MQ=255) cAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCgg > 2:7396105‑M2/2‑72 (MQ=255) cAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCgg < 1:3789358‑M2/71‑1 (MQ=255) | ATTTGCGATGACGTTACCGTTTTTCGTGATGGGCAATTTATTGCTGAGCGCGAAGTGGCATCACTGACCGAAGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGG > NC_012967/3896203‑3896344 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |