breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal read alignment evidence
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,105,6120AC25.0% 43.0 / 17.1 28L20R (CTG→CGG) cpxRDNA‑binding transcriptional dual regulator CpxR

Marginal new junction evidence (sorted from low to high skew)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 88498621 (0.650)3 (0.100) 3/400 3.5 6.8% coding (245/285 nt) ybjH uncharacterized protein YbjH
?NC_000913 = 3753944 62 (2.010)coding (156/1137 nt) yiaV putative membrane fusion protein YiaV
* ? NC_000913 = 3428288NA (NA)3 (0.090) 3/418 3.6 20.1% noncoding (475/1542 nt) rrsD 16S ribosomal RNA
?NC_000913 = 3491734 12 (0.370)coding (564/573 nt) ppiA peptidyl‑prolyl cis‑trans isomerase A
* ? NC_000913 2637043 =32 (0.990)3 (0.090) 3/418 3.6 9.1% coding (314/1473 nt) der 50S ribosomal subunit stability factor
?NC_000913 2637097 = 28 (0.870)coding (260/1473 nt) der 50S ribosomal subunit stability factor
* ? NC_000913 2170171 =NA (NA)3 (0.090) 3/420 3.6 8.8% noncoding (1/1258 nt) IS3 repeat region
?NC_000913 = 4003842 31 (0.960)coding (337/891 nt) rarD putative transporter RarD