New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)14 (0.350) 11/436 2.5 22.9% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3857972 47 (1.170)coding (433/1494 nt) yidJ putative sulfatase/phosphatase YidJ

GTGATGTTCCGGTTTGTTAGCCAGGTCATCCTGTGCTTTCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTG  >  NC_000913/3857718‑3858241
                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                              
gTGATGTTCCGGTTTGTTAGCCAGGTCATCCTGTGCTTTCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGt                                                                                                                                                                                                                                               >  1:215264/1‑288 (MQ=255)
 tGATGTTCCGGTTTGTTAGCCAGGTCATCCTGTGCTTTCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAAt                                                                                                                                                                                                                                                           >  1:653403/1‑275 (MQ=255)
 tGATGTTCCGGTTTGTTAGCCAGGTCATCCTGTGCTTTCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTc                                                                                                                                                                                                                                              >  1:289313/1‑288 (MQ=255)
                          cATCCTGTGCTTTCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCAt                                                                                                                                                                                                                     <  1:148530/288‑1 (MQ=255)
                            aagatacagttCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGACACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGGAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGTTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTGCGACGCTGTTTAGGGCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCg                                                                                                                                                                                                                   <  1:188510/279‑1 (MQ=255)
                                      tctcGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAAt                                                                                                                                                                                                         <  1:37009/288‑1 (MQ=255)
                                              aGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTcc                                                                                                                                                                                                 <  1:696020/288‑1 (MQ=255)
                                                  cGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGTTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCCGGGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAACCTGCGACGCTGTTTAGGCCATTGCGCCAGAGGCTAATCTGTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACt                                                                                                                                                                                             <  1:93689/288‑1 (MQ=255)
                                                     agtaAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGATGAACGGGTGATGCGGCTCATAATACGACACCACCATCAGTAAAGGCCCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGACTGCTGATACGATACGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTGCGTCAGTTCGCGAAGATAGTTCGCCCCATCAAACCAGTAATCATCGTCCCACTcc                                                                                                                                                                                           >  1:445781/1‑287 (MQ=255)
                                                              cAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGAGTGATGCGGCTCATCATACGAAACCACCATCAGTAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGTTTCGCCGGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTACTCAGCGTCCCACTCCGGCGGacac                                                                                                                                                                                  >  1:688426/1‑287 (MQ=255)
                                                                     tttCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAg                                                                                                                                                                           <  1:321686/287‑1 (MQ=255)
                                                                                   ccACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAg                                                                                                                                                                                                                                            >  2:77432/1‑208 (MQ=255)
                                                                                   ccACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAAACTCTTTTTCCGTCAg                                                                                                                                                                                                                                            <  1:77432/208‑1 (MQ=255)
                                                                                                gAACGGGGGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGaa                                                                                                                                                                    <  1:259469/267‑1 (MQ=255)
                                                                                                       tGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaag                                                                                                                                              >  1:32103‑M2/1‑152 (MQ=255)
                                                                                                        gATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATATGATGCGCCCAGGTGAAGTTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAg                                                                                                                                                                                                                                            >  1:542104/1‑187 (MQ=255)
                                                                                                        gATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGc                                                                                                                                       >  1:563680/1‑288 (MQ=255)
                                                                                                        gATGCGGCTCATCATACGAAACCACCACCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATATGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAg                                                                                                                                                                                                                                            <  2:542104/187‑1 (MQ=255)
                                                                                                         aTGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                                                                                                                                              <  1:481993‑M2/184‑35 (MQ=255)
                                                                                                         aTGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                                                                                                                                              >  2:481993‑M2/1‑150 (MQ=255)
                                                                                                              gCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGCTGCCATTTGCCGATGt                                                                                                                                 >  1:434275/1‑288 (MQ=255)
                                                                                                                     atACCAACCCACCAGCTGGAAAGGCTCTTCTGCGCCGGCAGGCTGTTGCAGAAAATCCACCGCCCGAATGCTGATACGACGCGCCCCGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCca                                                                                                                                                                                                                                                                    <  2:540141/150‑1 (MQ=255)
                                                                                                                           aaCCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                                                                                                                                              >  2:160781‑M2/1‑132 (MQ=255)
                                                                                                                           aaCCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                                                                                                                                              <  1:160781‑M2/166‑35 (MQ=255)
                                                                                                                              caccaTCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCGGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAAt                                                                                                                                                                                                                                                           >  1:540141/1‑150 (MQ=255)
                                                                                                                                             cTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCg                                                                                                                                                                                                                   >  2:162224/1‑175 (MQ=255)
                                                                                                                                             cTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCGGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCg                                                                                                                                                                                                                   <  1:162224/175‑1 (MQ=255)
                                                                                                                                                 tCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctat                                                                                                                                                                       <  1:224417‑M2/215‑106 (MQ=255)
                                                                                                                                                         cgcAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcc                                                                                      >  1:613352‑M2/1‑102 (MQ=255)
                                                                                                                                                                tGATGCAGAAAATCCTCCGCCCGCTTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgcgccgattttttctcccgtaaatgccttaaatcagcctatttagaccgtttcttcgacatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaa                                                                                  >  1:31642‑M2/1‑95 (MQ=255)
                                                                                                                                                                        aaaaTCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAgg                                                                                                                           >  1:215854/1‑236 (MQ=255)
                                                                                                                                                                        aaaaTCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCAGTCAGTTCGCTAAGATAGTTTGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGCAATAGTCATGACCGTCGAGATGCCATTTTCCGATGTAACAGGTGTGATAGCCGGAATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGca                                                                       >  1:285927/1‑287 (MQ=255)
                                                                                                                                                                          aaTCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTc                                                                                                                                                                                                                                                  >  1:581310/1‑115 (MQ=255)
                                                                                                                                                                          aaTCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGtt                                                                                                                                                                                                                                          <  1:537168/123‑1 (MQ=255)
                                                                                                                                                                          aaTCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGtt                                                                                                                                                                                                                                          >  2:537168/1‑123 (MQ=255)
                                                                                                                                                                           aTCCACCGCCCGATTGCTGATACGAGGCGCCCAGGTGAAGGTTTCGTTGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagc                                                                    >  1:177443‑M2/1‑84 (MQ=255)
                                                                                                                                                                            tCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTg                                                                         >  1:472400/1‑282 (MQ=255)
                                                                                                                                                                            tCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCAACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCCGCTGACACTCGCCAGTTCCGAAATCGTCATGACCGTCGAGATGCCATTTTCCGGTGTTACTGTGGTGATAGCCGGCATCCTTAAAGTAACGGCTCCTCGTGGGGTTTTTTTTgggtgag                                                                   >  2:155861/1‑282 (MQ=255)
                                                                                                                                                                             ccACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGgcg                                                                  <  1:198599/288‑1 (MQ=255)
                                                                                                                                                                                      gATTGCTGATACGATGCGCCAAGGTGAAGGCTTCGCGGATATGGGTCGCCTGTAAATATTCGAGGCTGTTTAGGCCATTCCGCCACAGGCTAAGCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCa                                                                                                                                                                                                              >  1:127521/1‑139 (MQ=255)
                                                                                                                                                                                             gATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCa                                                 <  1:88367/288‑1 (MQ=255)
                                                                                                                                                                                              aTACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                                                                                                                                                                <  1:72817‑M2/161‑97 (MQ=255)
                                                                                                                                                                                              aTACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                                                                                                                                                                >  2:72817‑M2/1‑65 (MQ=255)
                                                                                                                                                                                                actnccctcncctgTGAAGGTTTTGTGGTTATGTTTCGCCTGTAAATATTAGCCGCTGTTTATGCCATTGCGCCACAGGATAATCTCTTTTTCCGCCAGTTCGCGAAGATAGTTCGCCCCATCGAACCAGGAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGcc                                                                       <  2:417966/251‑1 (MQ=255)
                                                                                                                                                                                                 cGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACggg                                             <  1:298912/288‑1 (MQ=255)
                                                                                                                                                                                                                aaGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagca                               >  1:347138‑M2/1‑47 (MQ=255)
                                                                                                                                                                                                                aaGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGCCACTCGCCAGTGCCGCAATAGGCATGACCGTCGAGATGCCATTTGCCGCTGTAACAGGGGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTACCTGGGGCCAc                                                             >  1:417966/1‑257 (MQ=255)
                                                                                                                                                                                                                  ggTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATCGCCATGACCGTCGAGCAGCCATTTGCCGATGTATCCGGGTTGTCAGCCGGCACCCCTAAACGAGTGCCCCTAACCGGAGATGTGTTCTCGTGGCGCAAGCATTGTTGGtttgct                                               >  2:398556/1‑265 (MQ=255)
                                                                                                                                                                                                                                  ttCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACCCCCGCCACTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGAAACCGGGAAATAg             >  1:264771/1‑287 (MQ=255)
                                                                                                                                                                                                                                       cTGTAAATCTCCGACGCTGTTTAGGCTATTGCGCCACAGGCTAATCTGTTTTTCCGTCAGTCCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACCCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGAGGCCATTGCCCGATGTAACAGGTGTGATAGCCGACATCCTTAAAGTAGCGCCCCATAGTGGAGTTGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGc       <  1:262767/288‑1 (MQ=255)
                                                                                                                                                                                                                                           aaaTCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTa                                                                                                                                                                                                                                                             <  2:266858/39‑1 (MQ=255)
                                                                                                                                                                                                                                            aaTCTTCGACGCTGTTTAGGCCATTCCGCCACATGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCCTCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGCTCCACGGGCCGTACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTg  <  1:155861/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 tCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCTGTTCGCTAAGAt                                                                                                                                                                                                                                 >  1:358359/1‑61 (MQ=255)
                                                                                                                                                                                                                                                    aCGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCtttt                                                                                                                                                                                                                                                    >  1:266858/1‑39 (MQ=255)
                                                                                                                                                                                                                                                          tttAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagc                                >  1:550340‑M2/1‑5 (MQ=255)
                                                                                                                                                                                                                                                          tttAGggaagggtcgaataagctgggaaattcttctcggctgactcagtcatttcatttcttcatgttttagccgattttttctcccgtaaatgccttgaatcagcctatttagacagtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagca                               >  1:46927‑M2/1‑5 (MQ=255)
                                                                                                                                                                                                                                                          tttAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCcggc                                                                                                                                                                                        >  1:117274/1‑93 (MQ=255)
                                                                                                                                                                                                                                                          tttAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCcggc                                                                                                                                                                                        <  2:117274/93‑1 (MQ=255)
                                                                                                                                                                                                                                                           ttAGGCCATTGCTCCACAGGCTAATCGCTTTGTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGTACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCGATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACggg                                             <  1:486462/230‑1 (MQ=255)
                                                                                                                                                                                                                                                           ttAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCCCTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATa                        <  1:335347/251‑1 (MQ=255)
                                                                                                                                                                                                                                                           ttAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCAACGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTGGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGa                                        <  1:328982/235‑1 (MQ=255)
                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                              
GTGATGTTCCGGTTTGTTAGCCAGGTCATCCTGTGCTTTCTCGCCCAGCTCGTAGTAAAAATCAGCGTATTTCTCTAAATACTCCACCGGACAGGTGAACGGGTGATGCGGCTCATCATACGAAACCACCATCAGGAAAGGCTCGTCTGCGCGCGCAGGCTGTTGCAGAAAATCCACCGCCCGATTGCTGATACGATGCGCCCAGGTGAAGGTTTCGTCGATATGGTTCGCCTGTAAATCTTCGACGCTGTTTAGGCCATTGCGCCACAGGCTAATCTCTTTTTCCGTCAGTTCGCTAAGATAGTTCGCCCCATCGAACCAGTAATCAGCGTCCCACTCCGGCGGACACTCGCCAGTGCCGAAATAGTCATGACCGTCGAGATGCCATTTGCCGATGTAACAGGTGTGATAGCCGGCATCCTTAAAGTAGCGCCCCATAGTGGAGATGTTTTTGCCTGGCGCGACGTTGTTGGTCCACGGGCCGGACTGGTTAGCGTAGATACCGGTAAATAGTCCGGCCCGTG  >  NC_000913/3857718‑3858241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.