Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,812,859 Δ1 bp intergenic (‑105/+46) ygaG ← / ← gshA hypothetical protein/gamma‑glutamate‑cysteine ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,812,8580C.100.0% 2391.7 / NA 495intergenic (‑104/+47)ygaG/gshAhypothetical protein/gamma‑glutamate‑cysteine ligase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (268/227);  total (268/227)

Only 100 of 530 total aligned reads displayed.

CTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGC  >  NC_000913/2812763‑2812949
                                                                                               |                                                                                           
cTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTc                                                                                             >  2:2052386/1‑96 (MQ=255)
  ccGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcag                                                                                           <  2:14146828/96‑3 (MQ=255)
   cGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTcaga                                                                                          <  2:13598111/96‑4 (MQ=255)
      tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGAt                                                                                      >  1:1756817/1‑96 (MQ=255)
      tAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGGTATCATCATCCCTGAATTCAGAGAt                                                                                      >  2:12269124/1‑96 (MQ=255)
       aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAgagagg                                                                                     <  1:10292197/96‑3 (MQ=255)
       aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATg                                                                                     <  1:5955499/96‑1 (MQ=255)
       aaTTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATg                                                                                     >  2:2609496/1‑96 (MQ=255)
         tttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGaa                                                                                   >  2:10092005/1‑96 (MQ=255)
          ttttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGaaa                                                                                  >  1:192789/1‑96 (MQ=255)
           tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAAt                                                                                 >  1:11543889/1‑96 (MQ=255)
           tttttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAAt                                                                                 <  2:14321748/96‑1 (MQ=255)
             tttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAAttt                                                                               >  2:1693225/1‑96 (MQ=255)
              ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAAtttt                                                                              >  1:6784687/1‑96 (MQ=255)
              ttAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAAtttt                                                                              >  1:14346004/1‑96 (MQ=255)
               tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTg                                                                             >  1:10015289/1‑96 (MQ=255)
               tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTg                                                                             <  2:6984525/96‑1 (MQ=255)
               tAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTg                                                                             <  1:12502509/96‑1 (MQ=255)
                   aaTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCa                                                                         >  1:6249198/1‑96 (MQ=255)
                    aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCAc                                                                        >  1:2447410/1‑96 (MQ=255)
                    aTTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCAc                                                                        >  2:2233488/1‑96 (MQ=255)
                     ttttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACt                                                                       <  2:1671405/96‑1 (MQ=255)
                      tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTc                                                                      <  1:8106950/96‑1 (MQ=255)
                      tttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTc                                                                      <  2:12857114/96‑1 (MQ=255)
                       ttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCa                                                                     >  2:7359654/1‑96 (MQ=255)
                       ttCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATCTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCa                                                                     <  2:10429579/96‑1 (MQ=255)
                        tCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCAc                                                                    <  1:1649340/96‑1 (MQ=255)
                        tCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCAc                                                                    <  1:2492393/96‑1 (MQ=255)
                         cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACg                                                                   >  1:3289727/1‑96 (MQ=255)
                         cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACg                                                                   >  2:12549411/1‑96 (MQ=255)
                         cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACg                                                                   >  2:4948580/1‑96 (MQ=255)
                         cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACg                                                                   >  1:6561808/1‑96 (MQ=255)
                         cTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACg                                                                   <  2:3675093/96‑1 (MQ=255)
                           gAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAg                                                                 <  1:3006550/96‑1 (MQ=255)
                           gAACTCTTTCTACCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAg                                                                 <  2:7090865/96‑1 (MQ=255)
                             aCTCTTTCTTCCCAGGCGAGTCTTAGTATATGAAAGACGCGCATTTGTTATCACCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTg                                                               <  1:3566597/96‑1 (MQ=255)
                               tgtttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGGGGc                                                             >  1:14229329/3‑96 (MQ=255)
                                ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGcc                                                            >  2:8708304/1‑96 (MQ=255)
                                ctttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGcc                                                            >  1:14072511/1‑96 (MQ=255)
                                 tttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                           >  2:13754257/1‑96 (MQ=255)
                                 tttcttCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCt                                                           >  2:5762522/1‑96 (MQ=255)
                                   tcttcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCttt                                                         >  1:10952236/1‑96 (MQ=255)
                                      tcCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttc                                                      >  1:5102410/1‑96 (MQ=255)
                                       cccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct                                                     >  1:12049820/1‑96 (MQ=255)
                                       cccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttct                                                     <  1:7801391/96‑1 (MQ=255)
                                        ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctt                                                    >  2:6252448/1‑96 (MQ=255)
                                        ccAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcgt                                                    <  1:11847378/96‑3 (MQ=255)
                                         cAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttt                                                   >  2:3053114/1‑96 (MQ=255)
                                         cAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttt                                                   <  1:9689745/96‑1 (MQ=255)
                                          aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttctttt                                                  <  1:4250218/96‑1 (MQ=255)
                                          aGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttat                                                  <  1:10740963/96‑3 (MQ=255)
                                           ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc                                                 <  1:4716617/96‑1 (MQ=255)
                                           ggCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCACAGATGAAATTTTGGCCACTCACGAGTGGCCTttttcttttc                                                 <  2:13279255/96‑1 (MQ=255)
                                             cGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCCCGAGTGGCCTTTTTCTTTTCTg                                               <  1:5752906/96‑1 (MQ=255)
                                              gcgTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGt                                              <  1:3831845/94‑1 (MQ=255)
                                              gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGt                                              >  2:5532917/1‑96 (MQ=255)
                                              gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGt                                              <  1:12247545/96‑1 (MQ=255)
                                              gAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGt                                              >  1:7456061/1‑96 (MQ=255)
                                               aGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTc                                             >  2:12401429/1‑96 (MQ=255)
                                                gTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCa                                            <  1:5205474/96‑1 (MQ=255)
                                                  cTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAgg                                          <  2:9318023/96‑1 (MQ=255)
                                                    gAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGcc                                        <  1:11345866/96‑2 (MQ=255)
                                                    gAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCg                                        >  1:13377714/1‑96 (MQ=255)
                                                     aGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgt                                       >  2:2418391/1‑96 (MQ=255)
                                                      gTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCgtg                                      >  2:6532164/1‑96 (MQ=255)
                                                        atatGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtt                                    <  1:11169059/96‑1 (MQ=255)
                                                         tatGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttt                                   >  2:11770666/1‑96 (MQ=255)
                                                          atGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGtttt                                  <  2:3307946/96‑1 (MQ=255)
                                                           tGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                                 >  1:4472484/1‑96 (MQ=255)
                                                           tGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGttttt                                 <  1:9902812/96‑1 (MQ=255)
                                                              aaGACGCGCGTTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCa                              >  2:13939366/1‑96 (MQ=255)
                                                                   gcgcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac                         >  2:4499728/1‑96 (MQ=255)
                                                                   gcgcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac                         <  1:8734704/96‑1 (MQ=255)
                                                                   gcgcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTACAGCcac                         >  1:7638320/1‑96 (MQ=255)
                                                                   gcgcATATGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcac                         >  2:11240395/1‑96 (MQ=255)
                                                                    cgcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCcaca                        <  1:13713441/96‑1 (MQ=255)
                                                                     gcATTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCacac                       >  1:2784585/1‑96 (MQ=255)
                                                                      cATTTGTTATCATCCTCCATGAATTCAGAGATGAAATTTTGGCCACTCTCGAGTGGCCTTTTGCTTTTCTGTCAGGCGTGTTTTTCCAGCCACAcc                      <  2:4037875/96‑1 (MQ=255)
                                                                       aTTTGTTATCATCATCCCTGAATTCAGAGATGAAATTTTGTCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCg                     >  1:9031945/1‑96 (MQ=255)
                                                                           gTTATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCaaa                 <  1:7263290/96‑1 (MQ=255)
                                                                            ttATCATCATCCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAAc                >  1:6690165/1‑96 (MQ=255)
                                                                                catcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGtt            >  1:2216560/1‑96 (MQ=255)
                                                                                 atcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTc           <  1:8359185/96‑1 (MQ=255)
                                                                                  tcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCTTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg          <  2:12049820/96‑1 (MQ=255)
                                                                                  tcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCATGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg          >  2:6053030/1‑96 (MQ=255)
                                                                                  tcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCg          >  2:9463068/1‑96 (MQ=255)
                                                                                  tcatcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCCTGTTTTTCCAGCCACACCGCAAACGGTTCg          >  2:11647684/1‑96 (MQ=255)
                                                                                    acccccGAATTCAAAGATTAATTTTTGGCCAATCACGAGTTGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGt        <  2:2678439/94‑1 (MQ=255)
                                                                                     tcCCTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACTGTTCGGTa       >  1:9474261/1‑96 (MQ=255)
                                                                                      cccTGAATTCAGAGATGAAATTTTGGCTATTCACGAGTGCCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAt      <  2:11895945/96‑1 (MQ=255)
                                                                                      cccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAt      <  2:5408103/96‑1 (MQ=255)
                                                                                      cccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTAt      <  2:7923070/96‑1 (MQ=255)
                                                                                       ccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATc     >  1:5314719/1‑96 (MQ=255)
                                                                                       ccTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGCTCGGTATc     <  1:12948452/96‑1 (MQ=255)
                                                                                        cTGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCa    <  1:794790/96‑1 (MQ=255)
                                                                                         tGAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAg   >  2:8909633/1‑96 (MQ=255)
                                                                                          gAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCTGTATCAGc  >  2:4813146/1‑96 (MQ=255)
                                                                                          gAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGc  <  2:10811666/96‑1 (MQ=255)
                                                                                          gAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGc  <  2:8354634/96‑1 (MQ=255)
                                                                                          gAATTCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGc  <  2:9613567/96‑1 (MQ=255)
                                                                                               |                                                                                           
CTCCGGTAATTTTTTTAAAAATTTTCTGAACTCTTTCTTCCCAGGCGAGTCTGAGTATATGAAAGACGCGCATTTGTTATCATCATCCCTGAATTCCAGAGATGAAATTTTGGCCACTCACGAGTGGCCTTTTTCTTTTCTGTCAGGCGTGTTTTTCCAGCCACACCGCAAACGGTTCGGTATCAGC  >  NC_000913/2812763‑2812949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: