Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,554,113 Δ1 bp coding (372/396 nt) yhgKJ ← RNA phosphage cyclase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,554,1130C.98.2% 1525.6 / 14.3 333coding (372/396 nt)yhgKJRNA phosphage cyclase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base . (154/172);  minor base G (5/1);  total (159/174)
Fisher's exact test for biased strand distribution p-value = 1.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 381 total aligned reads displayed.

GCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGAGGCGGCGCCGACGGGTTATCGGTCGCCGCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCT  >  NC_000913/3554023‑3554202
                                                                                           |                                                                                          
 cGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGtgccgcc                                                                                     <  2:7407989/96‑2 (MQ=255)
  gTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGtgccgccg                                                                                    >  1:2453598/1‑94 (MQ=255)
    ggTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGtgccgccgct                                                                                  >  2:8366213/1‑92 (MQ=255)
      tttGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCa                                                                                 <  1:12150735/96‑1 (MQ=255)
         gCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCATGCGGCGCCGACGGGGTATCGGGGCCCCCCCTCACtt                                                                              >  1:4756902/1‑96 (MQ=255)
          cggatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGACGGCGGCGACGGTGTATCGGTGCCGCCGCTCACTTc                                                                             >  1:10259785/3‑96 (MQ=255)
          cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTc                                                                             >  2:11755810/1‑96 (MQ=255)
          cTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTc                                                                             <  1:2074412/96‑1 (MQ=255)
           tgatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGGGGCGCCGACGGGGTATCGGTGCCGCCGCTCACTTCa                                                                            >  2:12039617/1‑96 (MQ=255)
            gatgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCaa                                                                           >  1:5826639/1‑96 (MQ=255)
             atgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAac                                                                          <  2:8060489/96‑1 (MQ=255)
             atgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAac                                                                          >  2:2023515/1‑96 (MQ=255)
             atgaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCCGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCCCTTCAac                                                                          >  1:3297271/1‑96 (MQ=255)
               gaATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAacac                                                                        <  2:2608209/96‑1 (MQ=255)
               gaATTCCTATTTTCGCAAGCAGCGGCTCCAGCACCCGGCGGATAAAAGCCGCAGGCGGCGCCGACGGCTTATCGGTGCCGCCGCTCACTTCAacac                                                                        <  1:8743162/96‑1 (MQ=255)
                 aTTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGTCGACGGGTTATCGGTGCCGCCGCTCACTTCAACAcgc                                                                      >  2:12232100/1‑96 (MQ=255)
                 aTTCCTATTTTCGCCAGCAGCGCCTCGAGCACCCGGCGCATAAAATCCGCAGGCGGCGCCGCCGGGTTATCGGTGCCGCCGCTCACTTCAACAcgc                                                                      <  1:12450072/96‑1 (MQ=255)
                  ttCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACAcgcg                                                                     <  2:10818893/96‑1 (MQ=255)
                     cTATTTTCGCCAGCAGCGGCTCCAGCTCCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAg                                                                  <  1:4846700/96‑1 (MQ=255)
                      tATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAgg                                                                 <  2:959315/96‑1 (MQ=255)
                      tATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGGGCCGCCGCTCACTTCAACACGCGAAgg                                                                 >  1:7408961/1‑96 (MQ=255)
                       aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGt                                                                >  1:8106563/1‑96 (MQ=255)
                       aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGt                                                                <  2:5899062/96‑1 (MQ=255)
                       aTTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGt                                                                <  1:12908208/96‑1 (MQ=255)
                        ttttCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGGTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTc                                                               >  2:3186908/1‑96 (MQ=255)
                           tCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCAt                                                            >  1:1523444/1‑96 (MQ=255)
                           tCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGCCCAt                                                            >  1:3488504/1‑96 (MQ=255)
                            cGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGGCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGGCCGTc                                                           >  1:660432/1‑96 (MQ=255)
                             gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                          >  1:4226628/1‑96 (MQ=255)
                             gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                          >  1:6220569/1‑96 (MQ=255)
                             gCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCg                                                          >  2:6977185/1‑96 (MQ=255)
                              ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                         <  2:1632156/96‑1 (MQ=255)
                              ccAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCgg                                                         >  1:13181904/1‑96 (MQ=255)
                               cagcagCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGc                                                        <  2:11112095/96‑1 (MQ=255)
                               cagcagCGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGc                                                        >  2:7937651/1‑96 (MQ=255)
                                agcagcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCa                                                       >  2:11509288/1‑96 (MQ=255)
                                   agcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAc                                                    >  1:1075131/1‑96 (MQ=255)
                                    gcGGCTCCAGCCCCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAcc                                                   <  1:6487122/96‑1 (MQ=255)
                                    gcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAcc                                                   <  1:7160921/96‑1 (MQ=255)
                                    gcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAcc                                                   <  1:11600048/96‑1 (MQ=255)
                                    gcGGCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGGTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGGCCATCGGCACAcc                                                   >  1:9056212/1‑96 (MQ=255)
                                     cGGATCCAGCACCCGGCGGATAAAAACCGCAGGCGGCGCAGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACca                                                  <  1:1229798/96‑1 (MQ=255)
                                      ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAcccc                                                 <  1:11076942/96‑3 (MQ=255)
                                      ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcac                                                 >  1:1690651/1‑96 (MQ=255)
                                      ggCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcac                                                 >  2:5535685/1‑96 (MQ=255)
                                       gCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcaca                                                >  2:5073448/1‑96 (MQ=255)
                                       gCTCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACcaca                                                >  2:11484595/1‑96 (MQ=255)
                                         tCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                              <  2:7806313/96‑1 (MQ=255)
                                         tCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                              <  2:5586098/96‑1 (MQ=255)
                                         tCCAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGGTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGCCCATCGGCAAACCACAgc                                              >  1:4645251/1‑96 (MQ=255)
                                         tCCAACACCCGGCGGATACAATCCGCAGGCGGCGCCGACAGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgc                                              >  1:10137656/1‑96 (MQ=255)
                                          ccAGCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAgcg                                             <  2:13515860/96‑1 (MQ=255)
                                             gCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCgg                                          <  2:12723398/96‑1 (MQ=255)
                                             gCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCgg                                          <  1:10364858/96‑1 (MQ=255)
                                             gCACCCGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCCCgg                                          <  2:10109740/96‑1 (MQ=255)
                                               gcccGGCGGATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgc                                        <  1:852849/95‑1 (MQ=255)
                                                cccGGCGGATAAAATCCGCAGGCGGCGCCGACGGGGTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAAACACAGCGCGGgca                                       >  2:626345/1‑96 (MQ=255)
                                                  cggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTTAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagc                                     <  2:14028606/96‑1 (MQ=255)
                                                   ggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagca                                    <  2:13859306/96‑1 (MQ=255)
                                                   ggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagca                                    <  2:9211370/96‑1 (MQ=255)
                                                   ggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagca                                    >  2:9785578/1‑96 (MQ=255)
                                                   ggcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGgcagca                                    <  1:9667558/96‑1 (MQ=255)
                                                    gcggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAc                                   >  1:13126183/1‑96 (MQ=255)
                                                     cggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAcc                                  >  1:7698271/1‑96 (MQ=255)
                                                     cggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCAcc                                  <  2:2342112/96‑1 (MQ=255)
                                                      ggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCg                                 >  1:4671273/1‑96 (MQ=255)
                                                      ggATAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCg                                 <  2:10441545/96‑1 (MQ=255)
                                                         tAAAGTCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGttt                              <  1:12950587/96‑1 (MQ=255)
                                                         tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGttt                              <  2:10255217/96‑1 (MQ=255)
                                                         tAAAATCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGttt                              >  2:861448/1‑96 (MQ=255)
                                                           aaaTCCGCAGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgc                            <  2:358652/96‑1 (MQ=255)
                                                               ccgcaGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTgcagca                        >  1:11907634/5‑96 (MQ=255)
                                                               ccgcaGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCACCACCGTTTgcagca                        >  2:4900461/5‑96 (MQ=255)
                                                                cgccggcggcGCCGACGGGTTATCGGTGCCGCCACTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCAc                       <  1:2640565/92‑1 (MQ=255)
                                                                  caGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCa                     <  2:13234407/95‑1 (MQ=255)
                                                                   aGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCCCCAg                    <  2:1334343/96‑1 (MQ=255)
                                                                   aGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                    >  1:3025059/1‑96 (MQ=255)
                                                                   aGGCGGCGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGCCCATCGCCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAg                    >  1:12502463/1‑96 (MQ=255)
                                                                    ggcggcGCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCTAACCACAGCGCGGGCAGCACCGTTTGCagcagcagc                   >  1:12696742/1‑96 (MQ=255)
                                                                      cggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCgc                 <  1:11374964/96‑2 (MQ=255)
                                                                      cggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGt                 >  2:284137/1‑96 (MQ=255)
                                                                      cggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGt                 >  1:7134002/1‑96 (MQ=255)
                                                                      cggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGt                 <  2:7169867/96‑1 (MQ=255)
                                                                       ggcgCCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTa                >  2:4745745/1‑96 (MQ=255)
                                                                        gcgcCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTAc               >  2:5280762/1‑96 (MQ=255)
                                                                          gcCGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACaa             >  1:11530888/1‑96 (MQ=255)
                                                                          gcCGACGGGGTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGTCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACaa             >  1:1583758/1‑96 (MQ=255)
                                                                            cGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt           <  1:9363947/96‑1 (MQ=255)
                                                                            cGACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACt           <  1:6708801/96‑1 (MQ=255)
                                                                             gACGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACtt          >  2:4641899/1‑96 (MQ=255)
                                                                              aCGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTc         >  1:5150030/1‑96 (MQ=255)
                                                                              aCGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTc         <  2:5477323/96‑1 (MQ=255)
                                                                              aCGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTc         >  2:1760009/1‑96 (MQ=255)
                                                                               cGGGTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTcc        <  1:13609407/96‑1 (MQ=255)
                                                                                gggTTATCTGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAAATTcca       >  1:385529/1‑95 (MQ=255)
                                                                                gggTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCg       >  1:6999745/1‑96 (MQ=255)
                                                                                gggTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCg       <  1:10012440/96‑1 (MQ=255)
                                                                                 ggTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCgg      >  2:8786360/1‑96 (MQ=255)
                                                                                  gTTATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgc     <  2:3714954/96‑1 (MQ=255)
                                                                                    tATCGGTGCCGCCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGgcgc   >  2:4032178/1‑96 (MQ=255)
                                                                                           |                                                                                          
GCGTGGTTTGCTGATGAATTCCTATTTTCGCCAGCAGCGGCTCCAGCACCCGGCGGATAAAATCCGAGGCGGCGCCGACGGGTTATCGGTCGCCGCGCTCACTTCAACACGCGAAGGTCCATCGGCAAACCACAGCGCGGGCAGCACCGTTTGCAGCACCAGCGTACAACTTCCGGCGCT  >  NC_000913/3554023‑3554202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: