Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,008,473 | +G | intergenic (+40/‑193) | b4555 → / → yigM | hypothetical protein/hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,008,472 | 1 | . | G | 98.9% | 1404.2 / 3.9 | 371 | intergenic (+39/‑194) | b4555/yigM | hypothetical protein/hypothetical protein |
Reads supporting (aligned to +/- strand): ref base . (2/2); new base G (185/182); total (187/184) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 |
Only 100 of 379 total aligned reads displayed.
AACTGGCTACAG‑C‑TGAAGGATTG‑ATTGCG‑TT‑‑G‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑GGGAAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC > NC_000913/4008399‑4008561 | actgggCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAg < 2:6198175/92‑1 (MQ=255) ctgggCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGt > 1:7196977/4‑96 (MQ=255) tgggCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTg > 2:14020536/3‑96 (MQ=255) gggCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgc < 2:12041227/95‑2 (MQ=255) gggCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgc < 2:3477950/95‑2 (MQ=255) ggCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcg > 1:7076684/1‑94 (MQ=255) ggCTACAG‑CGTGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcg < 2:13437271/96‑3 (MQ=255) gCTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgc > 2:7685925/1‑93 (MQ=255) cTACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgca > 2:198723/1‑92 (MQ=255) tACAGCC‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTAt > 2:14250077/1‑83 (MQ=255) cagcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCgcacca < 1:14422890/92‑1 (MQ=255) cagcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCgcacca < 2:3572644/92‑1 (MQ=255) aagcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCgcacca > 1:11336053/5‑96 (MQ=255) agcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAg > 1:8056151/4‑96 (MQ=255) gcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 2:8000064/3‑96 (MQ=255) gcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGc > 2:7169485/3‑96 (MQ=255) gcc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGc < 2:9198338/94‑1 (MQ=255) cc‑TGAAGGATTGTATTGCGTTT‑‑GCTGACGGGATGAACGACGCCGAAATGCTGTCGATTG‑CGGGGAAA‑GCCTGCATTATGGGCAGTGCGCACCAGCg < 2:10184571/95‑1 (MQ=255) cc‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCg > 1:5733034/2‑96 (MQ=255) cc‑TGAAGGATTGTACTGCG‑TTTGG‑GGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCAGTATGGGCAGTGCGCACCAGCg > 2:4580742/2‑96 (MQ=255) c‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGt > 1:4717965/1‑96 (MQ=255) c‑TGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGt > 2:9355629/1‑96 (MQ=255) tGAAGGTTTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGGCC‑GGCAAAGG‑CTGCATTATGGGCAGTGAGCACCAGCGTc > 1:10000040/1‑96 (MQ=255) tGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc > 1:10854513/1‑96 (MQ=255) tGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTc > 2:12779655/1‑96 (MQ=255) tGAAGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGGGCGCACCAGCGTc > 1:330447/1‑96 (MQ=255) aaGGATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTg > 1:6964135/1‑96 (MQ=255) ggATTGTATTGCG‑TTTGG‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGaa > 1:6141413/1‑96 (MQ=255) tttt‑‑G‑TGACGGGATGAACGACGCCTAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 1:13245395/94‑1 (MQ=255) tttgg‑tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGTGCAGTGAGCACCAGTGTCTGAAAGACCGTCATccc > 1:5092274/5‑96 (MQ=255) tttgg‑tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATccc < 2:9934253/92‑1 (MQ=255) ttgg‑tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CGGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg > 2:667754/4‑96 (MQ=255) ctgg‑tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCg > 1:8869207/4‑96 (MQ=255) tgg‑tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGa > 1:13187070/3‑96 (MQ=255) g‑tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGc > 2:5019823/1‑96 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt < 2:8539751/96‑1 (MQ=255) tgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCt > 1:12160187/1‑96 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g > 2:11592110/1‑96 (MQ=255) gACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g > 2:11053208/1‑96 (MQ=255) gACGCGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑g < 1:2012447/96‑1 (MQ=255) aCGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gg > 1:12434257/1‑95 (MQ=255) cGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑gga > 1:8685149/1‑94 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa < 1:9130859/96‑4 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa > 2:13587071/1‑93 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGAGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa > 2:6383718/1‑93 (MQ=255) gggATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGGGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑ggaa > 2:5675779/1‑93 (MQ=255) aTGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTg > 2:1559585/1‑96 (MQ=255) tGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGa < 2:7039376/96‑1 (MQ=255) gAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGGCCTTCATCCCGAGCTGGAAGTGAt < 1:3650023/96‑1 (MQ=255) aaCGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGAtt > 2:9511239/1‑96 (MQ=255) acgacgCCGACATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg < 1:10446427/96‑1 (MQ=255) acgacgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTg < 1:1342954/96‑1 (MQ=255) cgacgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTgg > 2:3437713/1‑96 (MQ=255) cgacgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTga < 1:13792932/96‑2 (MQ=255) gccgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt < 2:13414290/94‑1 (MQ=255) gacgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGt > 1:3907276/1‑96 (MQ=255) acgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa > 1:5201485/1‑96 (MQ=255) acgCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTa > 1:6395801/1‑96 (MQ=255) gCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt > 2:327963/1‑96 (MQ=255) gCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACt < 2:4288595/96‑1 (MQ=255) gCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGGGATTGGTACt > 1:2883237/1‑96 (MQ=255) gCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCACCCCGGGCTGGAAGTGATTGGTACt < 1:4551446/96‑1 (MQ=255) ccGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa < 2:583212/96‑1 (MQ=255) ccGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTa < 1:9500971/96‑1 (MQ=255) cGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAGGTGATTGGTACTaa > 1:5445168/1‑96 (MQ=255) gAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt < 2:313102/96‑1 (MQ=255) gAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGGCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAAt > 2:1055763/1‑96 (MQ=255) aaaTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCCCCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 2:2593835/96‑1 (MQ=255) aaaTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 2:9593158/1‑96 (MQ=255) aaaTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 2:13125727/1‑96 (MQ=255) aaaTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 1:11681880/96‑1 (MQ=255) aaaTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg < 1:2478460/96‑1 (MQ=255) aaaTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATg > 1:4869010/1‑96 (MQ=255) aTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 1:3112074/96‑1 (MQ=255) aTGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGcc < 2:11831566/96‑1 (MQ=255) ggtGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga > 1:7521313/3‑96 (MQ=255) gCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcga < 2:11280995/96‑1 (MQ=255) cTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGTCCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 1:14065070/96‑1 (MQ=255) cTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac > 1:6755947/1‑96 (MQ=255) cTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 1:9543973/96‑1 (MQ=255) cTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac < 1:1902855/96‑1 (MQ=255) cTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgac > 2:4433339/1‑96 (MQ=255) tGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGGCCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacn < 1:4189712/96‑2 (MQ=255) tGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacg < 1:12779655/96‑1 (MQ=255) tGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacg < 2:7485192/96‑1 (MQ=255) gTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGCCCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCcgacga < 2:2379647/96‑1 (MQ=255) tCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCgacgac > 1:4409288/1‑96 (MQ=255) cGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGacgacg < 2:4841377/96‑1 (MQ=255) gATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc > 2:6557579/1‑96 (MQ=255) gATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc > 2:4046019/1‑96 (MQ=255) gATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc > 2:13001925/1‑96 (MQ=255) gATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgc < 1:11590987/96‑1 (MQ=255) aTGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgcg < 2:5226627/96‑1 (MQ=255) aTGG‑CGGGGAAA‑GTCTGCATTATGGGCAGTGCGCCCCAGCGTCTGAACGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGAcgcg < 2:12519757/96‑1 (MQ=255) ggcggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt > 1:9971213/5‑96 (MQ=255) ggcggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGt < 2:12289099/92‑1 (MQ=255) ggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGcc > 2:12841156/2‑96 (MQ=255) ggggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGcc < 2:881401/95‑1 (MQ=255) gggAAA‑GACTGCATTATGGAGAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGATCTGGAAGTGATTGGTACTAATGCCGACGACTCGGTGCCg > 1:6505205/1‑96 (MQ=255) ggAAAGG‑CTGCATTATGGGCAGTGCGCACCAGCGTCTGAAAGACCTTCATCCCGAGCTGGAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGc < 1:14237029/96‑1 (MQ=255) | AACTGGCTACAG‑C‑TGAAGGATTG‑ATTGCG‑TT‑‑G‑TGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑GGGAAA‑G‑CTGCATTATGGGCAGTGGCCACCAGCGTCTGAAAGACCTTCATCCCGAGCT‑GAAGTGATTGGTACTAATGCCGACGACGCGGTGCCGC > NC_000913/4008399‑4008561 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |