Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,781,020 +G intergenic (‑144/+65) ypjA ← / ← b2648 putative ATP‑binding component of a transport system/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,781,0191.G99.4% 1885.5 / 0.8 531intergenic (‑143/+66)ypjA/b2648putative ATP‑binding component of a transport system/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/3);  new base G (261/266);  total (262/269)
Fisher's exact test for biased strand distribution p-value = 2.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01

Only 100 of 592 total aligned reads displayed.

TGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAG  >  NC_000913/2780924‑2781109
                                                                                                 |                                                                                           
 gAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAg                                                                                            <  2:7824485/96‑1 (MQ=255)
 gAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTCTTCTTTCGACAATGAg                                                                                            >  1:10354475/1‑96 (MQ=255)
 gAGGCATTTTTTAAACGCAGTGCGATGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAg                                                                                            <  2:3074449/96‑1 (MQ=255)
  aGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAgg                                                                                           <  1:12927691/96‑2 (MQ=255)
   ggCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAggc                                                                                          >  2:2838297/1‑94 (MQ=255)
   ggCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAggc                                                                                          <  1:4244168/96‑3 (MQ=255)
    gCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAggcc                                                                                         >  2:9597174/1‑93 (MQ=255)
    gCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAggcc                                                                                         <  1:1601405/96‑4 (MQ=255)
       ttttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGtt                                                                                      <  1:1895995/96‑1 (MQ=255)
        tttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCACTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTg                                                                                     <  2:4863569/96‑1 (MQ=255)
        tttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTg                                                                                     <  2:12148261/96‑1 (MQ=255)
        tttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTg                                                                                     <  1:4000681/96‑1 (MQ=255)
        tttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTg                                                                                     <  1:3865769/96‑1 (MQ=255)
         ttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTgg                                                                                    <  2:5334212/96‑2 (MQ=255)
         ttttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCCTATTCTTTTCTTTCGACAATGAGGCCGTTgg                                                                                    <  1:12189067/96‑2 (MQ=25)
          tttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTggc                                                                                   <  2:11534013/96‑3 (MQ=255)
          tttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTggc                                                                                   <  1:5456908/96‑3 (MQ=255)
          tttAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTATTTTCTTTCTACAATAACGCCGTTggc                                                                                   >  2:6772906/1‑94 (MQ=37)
            tAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaa                                                                                 <  1:2190177/96‑1 (MQ=255)
                cGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAAGCCGTTGGCaaaata                                                                             >  2:11663665/1‑96 (MQ=255)
                  cAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataaa                                                                           >  2:8732271/1‑96 (MQ=255)
                   aGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataaaa                                                                          <  1:3306589/96‑1 (MQ=255)
                   aGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataaaa                                                                          >  1:4600039/1‑96 (MQ=255)
                    gTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCaaaataaaat                                                                         <  1:2485232/96‑1 (MQ=255)
                      gcgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGa                                                                       >  2:1850538/1‑96 (MQ=255)
                      gcgcTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGa                                                                       <  1:10488754/96‑1 (MQ=25)
                      gcgcTGAAGGGCGGTTGGATAAAAAAGGCAATCCATTCAGGAAATACGGGCGAATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGa                                                                       >  1:1111021/1‑96 (MQ=25)
                         cTGAAATGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGAttt                                                                    >  2:10639559/1‑96 (MQ=37)
                          tGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                   >  1:7446776/1‑96 (MQ=255)
                          tGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                   >  1:58162/1‑96 (MQ=255)
                          tGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTACTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                   >  1:12324343/1‑96 (MQ=25)
                          tGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTAATCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTa                                                                   >  1:4900189/1‑96 (MQ=37)
                           gAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTAc                                                                  >  2:8589767/1‑96 (MQ=255)
                            aaGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTaaa                                                                 <  1:11682424/96‑3 (MQ=25)
                               tgtgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATaa                                                              >  2:7465715/1‑96 (MQ=255)
                                 tgGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATc                                                            <  2:2025336/96‑1 (MQ=37)
                                  ggTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCg                                                           >  1:12828022/1‑96 (MQ=255)
                                    ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCgct                                                         >  2:13733271/1‑94 (MQ=38)
                                    ttGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCgct                                                         <  1:10732142/96‑3 (MQ=37)
                                     tGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGttt                                                        <  2:14412666/96‑1 (MQ=37)
                                      ggATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTc                                                       >  2:8454632/1‑96 (MQ=255)
                                      ggATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTc                                                       >  2:10953342/1‑96 (MQ=255)
                                      ggATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTc                                                       <  1:10003488/96‑1 (MQ=255)
                                      ggATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAAGGATTTACATAATCGTTTc                                                       >  2:4154260/1‑96 (MQ=37)
                                        aTAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtg                                                     <  2:3984944/96‑1 (MQ=255)
                                         tAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtga                                                    >  2:429839/1‑96 (MQ=255)
                                          aaaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgat                                                   <  1:6429177/96‑1 (MQ=255)
                                           aaaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatg                                                  >  1:3654457/1‑96 (MQ=255)
                                            aaaaGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCtgatga                                                 <  1:6737143/96‑1 (MQ=255)
                                               aGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACACTGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                              >  2:12860760/1‑96 (MQ=37)
                                               aGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                              <  2:2150425/96‑1 (MQ=255)
                                               aGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAata                                              >  2:13307191/1‑96 (MQ=255)
                                                gTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAatat                                             <  2:7071268/96‑1 (MQ=25)
                                                   aaTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtctt                                          >  2:10218078/1‑96 (MQ=255)
                                                   aaTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtctt                                          >  1:13844429/1‑96 (MQ=255)
                                                    aTCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtcttc                                         >  1:2753123/1‑96 (MQ=255)
                                                     tCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtcttct                                        <  2:5943110/96‑1 (MQ=25)
                                                     tCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATAtcttct                                        <  1:1138429/96‑1 (MQ=255)
                                                      ccATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTg                                       <  2:13001723/96‑1 (MQ=255)
                                                      ccATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTg                                       <  2:12439296/96‑1 (MQ=255)
                                                       cATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGc                                      <  2:10371351/96‑1 (MQ=255)
                                                          tCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTca                                   <  1:8454632/96‑1 (MQ=255)
                                                          tCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTca                                   <  1:7646316/96‑1 (MQ=255)
                                                           cAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTcac                                  >  1:9275810/1‑96 (MQ=21)
                                                           cAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTcac                                  <  1:5180822/96‑1 (MQ=255)
                                                           cAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTcac                                  >  2:386090/1‑96 (MQ=255)
                                                             ggAAATACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACAt                                <  2:5562928/96‑1 (MQ=21)
                                                               aaaTACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaa                              <  2:9085421/96‑1 (MQ=255)
                                                               aaaTACGGCCGTATTCTTTTCTCTCGACAATGAGGCCGTTGGCAAAATAAAACGATTTCCATAATCGTTTCTGATGAATATCTTCTGCTCACATaa                              >  1:13612240/1‑96 (MQ=18)
                                                                aaTACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaa                             >  1:3461987/1‑96 (MQ=255)
                                                                  tACGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATaaaaa                           <  1:14329304/96‑1 (MQ=255)
                                                                   nagggCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAt                          >  1:3067592/3‑96 (MQ=18)
                                                                   aCGGGCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAt                          <  2:13845531/96‑1 (MQ=255)
                                                                     gggCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATca                        >  1:10830544/1‑96 (MQ=255)
                                                                     gggCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATca                        >  2:3473067/1‑96 (MQ=255)
                                                                       gCGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcaca                      >  1:12015242/1‑96 (MQ=17)
                                                                        cGTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcacac                     <  1:9075070/96‑1 (MQ=255)
                                                                         gTATTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATcacaca                    >  2:11193140/1‑96 (MQ=17)
                                                                          tATTCTTTTCTTTCGACAATGAGTCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCCCATAAAAATCACACaa                   <  2:12629928/96‑1 (MQ=17)
                                                                           aTTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt                  >  2:7269938/1‑96 (MQ=255)
                                                                           aTTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt                  <  1:8847120/96‑1 (MQ=255)
                                                                           aTTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt                  >  2:6345786/1‑96 (MQ=17)
                                                                           aTTCTTTTCTTTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAAt                  >  2:4464140/1‑96 (MQ=255)
                                                                            ttcttttcttTCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATa                 <  2:2417837/96‑1 (MQ=17)
                                                                             tcttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAAACACACAATaa                >  1:6127919/1‑96 (MQ=14)
                                                                              cttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAAc               >  1:808321/1‑96 (MQ=17)
                                                                               ttttctttCGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACt              <  2:9389767/96‑1 (MQ=14)
                                                                                tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACtt             <  2:5119577/96‑1 (MQ=17)
                                                                                tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACtt             <  1:12639635/96‑1 (MQ=17)
                                                                                tttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACtt             >  2:11843793/1‑96 (MQ=255)
                                                                                 ttctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACttt            <  1:4434670/96‑1 (MQ=255)
                                                                                  tctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg           <  2:3707927/96‑1 (MQ=255)
                                                                                  tctttcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTg           <  1:7179367/96‑1 (MQ=17)
                                                                                      tcGACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGAt       >  2:10798742/1‑96 (MQ=17)
                                                                                        gACAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCg     >  1:9490266/1‑96 (MQ=255)
                                                                                         aCAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGc    >  1:225877/1‑96 (MQ=255)
                                                                                         aCAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGc    <  1:13044027/96‑1 (MQ=255)
                                                                                          cAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCa   >  2:3649806/1‑96 (MQ=255)
                                                                                          cAATGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCa   >  2:1537429/1‑96 (MQ=18)
                                                                                           aaTGAGGCCGTTGGCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAg  >  1:9759220/1‑96 (MQ=18)
                                                                                                 |                                                                                           
TGAGGCATTTTTTAAACGCAGTGCGCTGAAGTGTGGTTGGATAAAAAAGTCAATCCATTCAGGAAATACGGGCGTATTCTTTTCTTTCGACAATGAGCCGTTGCCAAAATAAAATGATTTACATAATCGTTTCTGATGAATATCTTCTGCTCACATAAAAATCACACAATAACTTTGAGATCGCAG  >  NC_000913/2780924‑2781109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: