Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,838,044 +G coding (498/1458 nt) ascF → PTS system enzyme IIBC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,838,0431.G99.6% 2062.5 / ‑2.1 528coding (497/1458 nt)ascFPTS system enzyme IIBC
Reads supporting (aligned to +/- strand):  ref base . (0/2);  new base G (222/303);  total (222/306)
Fisher's exact test for biased strand distribution p-value = 5.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 584 total aligned reads displayed.

CGAGATGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGCATCTGCCGCGCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATG  >  NC_000913/2837948‑2838134
                                                                                                |                                                                                            
cGAGATGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgc                                                                                               <  2:10713744/96‑1 (MQ=255)
 gagaTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcg                                                                                             >  1:7110612/1‑96 (MQ=255)
 gagaTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcg                                                                                             <  1:11276933/96‑1 (MQ=255)
 gagaTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcg                                                                                             <  2:13789218/96‑1 (MQ=255)
 gagaTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTGCTTCTTCCTGCCGCTGATGGTcgcg                                                                                             >  2:9002888/1‑96 (MQ=255)
  agaTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGGGACGGTGTTTTCTTTTTTTTTCCGGTGGCGGTcgcgg                                                                                            >  1:6582860/1‑95 (MQ=255)
   gaTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcggc                                                                                           >  2:172987/1‑94 (MQ=255)
    aTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcggca                                                                                          <  2:10377147/96‑4 (MQ=255)
    aTGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcggca                                                                                          <  1:3183218/96‑4 (MQ=255)
     tGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcggcat                                                                                         >  1:1084434/1‑92 (MQ=255)
     tGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcggcat                                                                                         >  1:5689541/1‑92 (MQ=255)
     tGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTcgcggcat                                                                                         >  1:3815439/1‑92 (MQ=255)
       aGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCt                                                                                       <  2:12660393/96‑1 (MQ=255)
       aGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCATGCCGCTGATGGTCGCGTCATCt                                                                                       >  2:13040397/1‑96 (MQ=255)
       aGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGGGACGGTGCTTTCTTCTTACTGCCGCTGATGGTCGCGGCATCt                                                                                       >  2:3600713/1‑96 (MQ=255)
         cggcgTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGc                                                                                     <  2:62033/96‑1 (MQ=255)
          ggcgTGCTGACAAAAGGATCGCCTACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGcc                                                                                    <  1:12558439/96‑1 (MQ=255)
          ggcgTGCTGACAAAAGGATCGCCGGCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGcc                                                                                    >  2:8860456/1‑96 (MQ=255)
          ggcgTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGcc                                                                                    <  1:1530685/96‑1 (MQ=255)
          ggcgTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGcc                                                                                    >  1:5369053/1‑96 (MQ=255)
          ggcgTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTGCCTGCCGCTGATGGTCGCGGCATCTGcc                                                                                    <  2:13916429/96‑1 (MQ=255)
           gcgTGCTGACAAAAGGATCGCCGCCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTNCcg                                                                                   <  2:4433112/96‑1 (MQ=255)
             gTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCcgac                                                                                 <  1:11889113/96‑3 (MQ=255)
             gTGCAGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCcgcc                                                                                 >  2:9321582/1‑95 (MQ=255)
              tGCTGACAAAAGGATGGCCGCCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCcgcca                                                                                <  2:271238/96‑3 (MQ=255)
              tGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCcgcca                                                                                <  1:4037666/96‑3 (MQ=255)
               gCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCcgccat                                                                               <  2:5548601/96‑4 (MQ=255)
                 tGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCa                                                                            <  1:1737282/96‑1 (MQ=255)
                 tGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCa                                                                            >  2:2568578/1‑96 (MQ=255)
                   aCAAAAGGATCGCCGCCCTTAACCATTCTGAATGTGATTGGTGAGGGTGCTTACTTCTTGCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCaaa                                                                          <  1:302333/96‑1 (MQ=255)
                    cAAAAGGATCGCCGACCTTAACCATTCTGAATGGGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAt                                                                         >  1:2479812/1‑96 (MQ=255)
                     aaaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAtt                                                                        >  2:7750880/1‑96 (MQ=255)
                      aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                       >  2:6023082/1‑96 (MQ=255)
                      aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                       <  2:5703518/96‑1 (MQ=255)
                      aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                       <  2:6343624/96‑1 (MQ=255)
                      aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                       <  2:8075591/96‑1 (MQ=255)
                      aaaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAAttt                                                                       <  1:7044872/96‑1 (MQ=255)
                       aaGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTa                                                                      <  2:9826526/96‑1 (MQ=255)
                        aGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTaa                                                                     >  2:8327689/1‑96 (MQ=255)
                        aGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGCGCTTTCGTCTTCCTGCCGCTGATGGTCGCGACATCTGCAGCCATCAAATTTaa                                                                     >  1:9778409/1‑96 (MQ=255)
                         ggATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTTCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTaaa                                                                    >  1:9978918/1‑96 (MQ=255)
                            tCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAAcc                                                                 <  1:8939469/96‑1 (MQ=255)
                            tCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAAcc                                                                 <  1:12377963/96‑1 (MQ=255)
                             cGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAAcaa                                                                <  1:13059369/96‑3 (MQ=255)
                             cGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCa                                                                <  1:10360704/96‑1 (MQ=255)
                             cGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCa                                                                <  2:4853099/96‑1 (MQ=255)
                              gCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCaa                                                               >  1:1001294/1‑96 (MQ=255)
                              gCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCaa                                                               >  1:4514895/1‑96 (MQ=255)
                               ccGCCCTTAACCATACTGAATGTGATTGGTGACGGTGCTTTCTCCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAat                                                              <  2:1961616/96‑1 (MQ=255)
                                cGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAACACCAata                                                             >  2:417183/1‑96 (MQ=255)
                                cGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAata                                                             >  1:5164300/1‑96 (MQ=255)
                                  aCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATg                                                           >  2:796406/1‑96 (MQ=255)
                                  aCCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATg                                                           >  2:13262630/1‑96 (MQ=255)
                                    cTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTc                                                         <  1:13940253/96‑1 (MQ=255)
                                    cTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTc                                                         >  1:8056767/1‑96 (MQ=255)
                                     ttAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCTTCTGCCGCCATCAAATTTAAAACCAATATGTCg                                                        <  2:14066722/96‑1 (MQ=255)
                                     ttAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCg                                                        >  1:6757255/1‑96 (MQ=255)
                                       aaCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCt                                                      >  1:5879601/1‑96 (MQ=255)
                                       aaCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCt                                                      <  2:11681803/96‑1 (MQ=255)
                                       aaCCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCt                                                      <  2:11056982/96‑1 (MQ=255)
                                         ccATTCTGAATGTGATTGTTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTgg                                                    <  1:13442762/96‑1 (MQ=255)
                                          cATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGc                                                   <  1:2836761/96‑1 (MQ=255)
                                          cATTCTGAATGTGATTGGGGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGc                                                   <  1:6153585/96‑1 (MQ=255)
                                           aTTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCg                                                  <  2:10928840/96‑1 (MQ=255)
                                             tCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAACCCAATATGTCGCTGGCGAt                                                <  1:2012473/96‑1 (MQ=255)
                                             tCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGTGAt                                                >  1:8448653/1‑96 (MQ=255)
                                             tCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGAt                                                >  1:12161938/1‑96 (MQ=255)
                                             tCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGAt                                                >  1:5588647/1‑96 (MQ=255)
                                               tGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTg                                              <  2:3224717/96‑1 (MQ=255)
                                                 aaTGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGcc                                            >  2:2353772/1‑96 (MQ=255)
                                                  aTGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCa                                           >  1:13764286/1‑96 (MQ=255)
                                                    gtgATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCacc                                         <  1:11107438/96‑3 (MQ=255)
                                                    gtgATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATc                                         <  2:7416731/96‑1 (MQ=255)
                                                    gtgATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATc                                         <  2:4576603/96‑1 (MQ=255)
                                                     tgATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATcg                                        >  2:5266516/1‑96 (MQ=255)
                                                      gATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATcgc                                       <  1:9238493/96‑1 (MQ=255)
                                                         tGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCggg                                    >  1:3473795/1‑96 (MQ=255)
                                                            tgtcGGTTCTTTCTTCTTCCTCCCGCTGATGGTCGCGGCCTCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgtgt                                 <  2:6639246/93‑1 (MQ=255)
                                                            tgccGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGgtgt                                 <  1:7580013/93‑1 (MQ=255)
                                                             gccGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGtgtg                                <  2:6832088/94‑1 (MQ=255)
                                                                ggTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGCGTGCTg                             >  2:9591377/1‑96 (MQ=255)
                                                                   gCTTTCTTCTTCCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTa                          >  2:1578883/1‑96 (MQ=255)
                                                                    cTTTCTTCTTCCTGCAGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTAc                         <  1:4305500/96‑1 (MQ=255)
                                                                      ttcttcttcCTGCCGCTGAGGGTCGCGGCATCTGCCGCCATCAAATTTTAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACAt                       >  2:12772264/1‑96 (MQ=255)
                                                                      ttcttctccCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACAt                       <  2:373932/96‑1 (MQ=255)
                                                                         ttcttcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCg                    <  2:10496533/96‑1 (MQ=255)
                                                                          tcttcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTGAATCCGa                   >  1:9499427/1‑96 (MQ=255)
                                                                          tcttcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGa                   >  2:12171305/1‑96 (MQ=255)
                                                                            ttcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGt                 <  2:4018985/96‑1 (MQ=255)
                                                                             tcCTGCCGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGtt                >  2:13551176/1‑96 (MQ=255)
                                                                                   cGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTg          <  2:12048978/96‑1 (MQ=255)
                                                                                   cGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTg          >  2:10237331/1‑96 (MQ=255)
                                                                                   cGCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGGGTGCTGGTACATCCGAGATTTATTg          >  1:4847707/1‑96 (MQ=255)
                                                                                    gCTGATGGTCTCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATAGCCATCGCGCGGCGGCTGGTGCATCCGAGTTTTATTGa         >  1:11540264/1‑96 (MQ=255)
                                                                                    gCTGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGa         <  2:5458070/96‑1 (MQ=255)
                                                                                      tGATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAAc       >  2:70702/1‑96 (MQ=255)
                                                                                       gATGGTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGGCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACt      >  2:2269089/1‑96 (MQ=255)
                                                                                         tagTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGa    >  1:10537450/3‑96 (MQ=255)
                                                                                          ggTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGGGTGCTGGTACATCCGAGTTTTATTGAACTGAt   >  2:11489772/1‑96 (MQ=255)
                                                                                           gTCGCGGCATCTGCCGCCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATg  <  1:8655069/96‑1 (MQ=255)
                                                                                                |                                                                                            
CGAGATGAGCGGCGTGCTGACAAAAGGATCGCCGACCTTAACCATTCTGAATGTGATTGGTGACGGTGCTTTCTTCTTCCTGCCGCTGATGGTCGCGCATCTGCCGCGCATCAAATTTAAAACCAATATGTCGCTGGCGATTGCCATCGCGGGTGTGCTGGTACATCCGAGTTTTATTGAACTGATG  >  NC_000913/2837948‑2838134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: