Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,025,676 +C coding (535/570 nt) ygfQ → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,025,6751.C99.4% 1915.6 / 0.6 488coding (534/570 nt)ygfQhypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (2/1);  new base C (253/231);  total (255/233)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 552 total aligned reads displayed.

ATCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTCGCGTAC  >  NC_000913/3025580‑3025765
                                                                                                 |                                                                                          
aTCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTg                                                                                             >  1:13709458/1‑96 (MQ=255)
 tCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGc                                                                                           >  1:11612600/1‑96 (MQ=255)
 tCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGATAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGc                                                                                           <  2:1075767/96‑1 (MQ=255)
  cGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGcc                                                                                          <  2:13538694/96‑2 (MQ=255)
  cGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGGATGGTTATCAAAAATCCGATTGAAGGCTTGcc                                                                                          >  2:4138690/1‑95 (MQ=255)
   gCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGcca                                                                                         >  2:871239/1‑94 (MQ=255)
   gCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGcca                                                                                         >  1:89880/1‑94 (MQ=255)
    cTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGccag                                                                                        <  1:6238014/96‑4 (MQ=255)
    cTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGCATGGTTATCAAAAACTCGATTGAAGGCTTGccag                                                                                        >  1:9931994/1‑93 (MQ=255)
     tCACGGTACAGGTATCGGTATCGGTCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGccagt                                                                                       >  2:805284/1‑92 (MQ=255)
     tCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGccagt                                                                                       <  1:4995562/96‑5 (MQ=255)
     tCACGGTACAGGTATCGGTATCGGGCTGATTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGccagt                                                                                       >  2:13885278/1‑92 (MQ=255)
       aCGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTgg                                                                                      >  1:8442633/1‑96 (MQ=255)
        cGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGgc                                                                                     <  2:7883671/96‑1 (MQ=255)
        cGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGgc                                                                                     <  1:9757392/96‑1 (MQ=255)
         ggTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGgcg                                                                                    >  2:13776735/1‑96 (MQ=255)
            aCAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTc                                                                                 <  1:6972218/96‑1 (MQ=255)
            aCAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTc                                                                                 <  1:3849026/96‑1 (MQ=255)
               ggtatcggtatcGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGt                                                                              <  2:1031440/96‑1 (MQ=255)
                 tatcggtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGc                                                                            >  1:1666153/1‑96 (MQ=255)
                  atcggtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCg                                                                           >  2:92509/1‑96 (MQ=255)
                   tcggtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGt                                                                          <  1:518034/96‑1 (MQ=255)
                    cggtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGtt                                                                         <  2:2047217/96‑1 (MQ=255)
                    cggtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGtt                                                                         >  1:577388/1‑96 (MQ=255)
                    cggtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGtt                                                                         <  2:6651180/96‑1 (MQ=255)
                      gtatcggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTCTGGGTATGGTTATCAAAAACCCGATTGAAGGCTCGCCAGTGGCGCTCGATGCGTTTa                                                                       >  2:12639550/1‑96 (MQ=255)
                          cggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTAcctc                                                                   >  1:11166498/1‑96 (MQ=255)
                          cggGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTAcctc                                                                   <  2:14153922/96‑1 (MQ=255)
                           gggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTAcctcc                                                                  >  2:5869935/1‑96 (MQ=255)
                            ggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTAcctcct                                                                 <  2:1800035/96‑1 (MQ=255)
                            ggCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTAcctcct                                                                 <  2:6535273/96‑1 (MQ=255)
                            agCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTAcctcct                                                                 >  1:11355312/2‑96 (MQ=255)
                             gCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCtt                                                                <  2:10948521/96‑1 (MQ=255)
                                gTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCATccc                                                             <  2:11365114/96‑1 (MQ=255)
                                 tttCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCg                                                            >  2:1457503/1‑96 (MQ=255)
                                 tttCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCg                                                            >  2:3756801/1‑96 (MQ=255)
                                 tttCTGCTGCTGATTGCTGCTAACGGTGTGAGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCg                                                            <  2:11625406/96‑1 (MQ=255)
                                  ttCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCgg                                                           <  1:14194787/96‑1 (MQ=255)
                                  ttCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCgg                                                           <  2:7162432/96‑1 (MQ=255)
                                  ttCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCgg                                                           <  1:3363063/96‑1 (MQ=255)
                                   tCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTTAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGt                                                          >  2:5715595/1‑96 (MQ=255)
                                   tCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGt                                                          >  1:680397/1‑96 (MQ=255)
                                      gctgctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgat                                                       <  2:2391925/96‑1 (MQ=255)
                                         gctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgat                                                    >  2:12093968/1‑96 (MQ=255)
                                         gctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgat                                                    <  2:8451560/96‑1 (MQ=255)
                                          ctgATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGtgatgatg                                                   >  1:9395274/1‑96 (MQ=255)
                                                gctgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCtgg                                             <  1:7527121/96‑3 (MQ=255)
                                                gctgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTg                                             <  1:471205/96‑1 (MQ=255)
                                                gctgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTg                                             <  1:12898514/96‑1 (MQ=255)
                                                 ctgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGc                                            >  1:12656712/1‑96 (MQ=255)
                                                  ttctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTCCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCt                                           >  1:7373572/3‑96 (MQ=255)
                                                  tgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCt                                           <  2:530890/96‑1 (MQ=255)
                                                  tgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCt                                           >  1:11961622/1‑96 (MQ=255)
                                                  tgctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCt                                           <  1:5525284/96‑1 (MQ=255)
                                                   gctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTg                                          >  2:3461027/1‑96 (MQ=255)
                                                    ctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTCCCCGGTGATGATGAGCTTGCTgg                                         <  1:3944623/96‑1 (MQ=255)
                                                    ctAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCACTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTgg                                         <  2:12754146/96‑1 (MQ=255)
                                                     tAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTggg                                        >  1:414231/1‑96 (MQ=255)
                                                     tAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTggg                                        >  2:6014779/1‑96 (MQ=255)
                                                        cGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCt                                     >  2:3084511/1‑96 (MQ=255)
                                                         ggTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTg                                    >  2:2861955/1‑96 (MQ=255)
                                                           tgtgGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGc                                  >  1:4470714/1‑96 (MQ=255)
                                                           tgtgGCTAATGTTCTCTAATACCTGATTGAAGGCTTCCCAGAGGCGCTCGGTGCGCTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTgcc                                  <  1:13143483/96‑3 (MQ=255)
                                                            gtgGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCg                                 >  1:2916793/1‑96 (MQ=255)
                                                            gtgGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGATGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCg                                 >  2:13371912/1‑96 (MQ=255)
                                                             tgGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTTGCgg                                >  1:6535561/1‑96 (MQ=255)
                                                             tgGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCgg                                >  2:252599/1‑96 (MQ=255)
                                                             tgGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGGGATGATGAGCTTGCTGGGGCTGGCgg                                >  2:6932495/1‑96 (MQ=255)
                                                              gggTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCgat                               <  1:10718781/96‑3 (MQ=255)
                                                                gTATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGGGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCa                             >  2:897853/1‑96 (MQ=255)
                                                                 tATGGTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCAt                            >  2:9091898/1‑96 (MQ=255)
                                                                    ggTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCtt                         <  1:8183094/96‑1 (MQ=255)
                                                                     gTTATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTc                        <  1:6066096/96‑1 (MQ=255)
                                                                      ttAGCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCg                       >  2:10117693/1‑96 (MQ=255)
                                                                       tATCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGGCATCTTCgg                      >  1:2592426/1‑96 (MQ=255)
                                                                         tCAAAAACCCGATTGAAGGCTTGTCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGcc                    <  1:12535348/96‑1 (MQ=255)
                                                                         tCAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGATCTGGCTGGGGCTGGCGGTCATCTTCGGcc                    >  1:135220/1‑96 (MQ=255)
                                                                          cAAAAACCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGccg                   >  2:3939454/1‑95 (MQ=255)
                                                                           aaaaaCCCGATTGAAGGCTTGCCAGTTGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGTGGCTGTCGGTCATCTTCGGCCTg                  >  1:3114449/1‑96 (MQ=255)
                                                                           aaaaaCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTg                  >  1:10013460/1‑96 (MQ=255)
                                                                             aaaCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGga                >  2:9541790/1‑96 (MQ=255)
                                                                             aaaCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGga                >  1:9131007/1‑96 (MQ=255)
                                                                              aaCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTGGGCCTGgag               >  1:7233591/1‑96 (MQ=255)
                                                                              aaCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgag               >  1:10557057/1‑96 (MQ=255)
                                                                              aaCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgag               >  1:10903070/1‑96 (MQ=255)
                                                                               aCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgaga              >  1:362314/1‑96 (MQ=255)
                                                                               aCCCGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGgaga              >  2:7497834/1‑96 (MQ=255)
                                                                                  cGATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgt           <  2:4275410/96‑1 (MQ=255)
                                                                                   gATTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGACTGGAGAAgtg          >  1:2422872/1‑96 (MQ=255)
                                                                                    aTTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt         <  1:10311453/96‑1 (MQ=255)
                                                                                    aTTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt         <  1:2038283/96‑1 (MQ=255)
                                                                                    aTTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt         >  2:12411081/1‑96 (MQ=255)
                                                                                    aTTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAgtgt         <  2:13046134/96‑1 (MQ=255)
                                                                                    aTTGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGCGGCTGGCGGGCATCTTCGGCCTGGAGGAgggt         >  1:12306323/1‑96 (MQ=255)
                                                                                     ttGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTCCCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTc        <  2:6205565/96‑1 (MQ=255)
                                                                                     ttGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGCTGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTc        <  2:12888824/96‑1 (MQ=255)
                                                                                     ttGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTc        <  1:13885278/96‑1 (MQ=255)
                                                                                      tGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCTGCCTAGAGAAGTGTcg       >  2:5486328/1‑96 (MQ=255)
                                                                                      tGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTTGAGAAGTGTcg       >  2:462408/1‑96 (MQ=255)
                                                                                      tGAAGGCTTGCCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTcg       >  2:4811913/1‑96 (MQ=255)
                                                                                                 |                                                                                          
ATCGCTCACGGTACAGGTATCGGTATCGGGCTGTTTCTGCTGCTGATTGCTGCTAACGGTGTGGGTATGGTTATCAAAAACCCGATTGAAGGCTTGCAGTGGCGCTCGGTGCGTTTACCTCCTTCCCGGTGATGATGAGCTTGCTGGGGCTGGCGGTCATCTTCGGCCTGGAGAAGTGTCGCGTAC  >  NC_000913/3025580‑3025765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: