BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,075,220	(T)_5→6	coding (256/357 nt)	yggP ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,075,215	1	.	T	98.9%	1726.2 / 8.4	446	coding (261/357 nt)	yggP	hypothetical protein
Reads supporting (aligned to +/- strand): ref base . (2/3); new base T (237/202); total (241/205)
Fisher's exact test for biased strand distribution p-value = 6.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01

Only 100 of 505 total aligned reads displayed.

CATATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCG  >  NC_000913/3075120‑3075305

cATATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGcc                                                                                             >  2:3511943/1‑96 (MQ=255)

 atatAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑t                                                                                           <  1:515988/96‑1 (MQ=255)

  tataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tt                                                                                          <  1:9643245/96‑1 (MQ=255)

   ataAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttt                                                                                         >  2:5195653/1‑96 (MQ=255)

    taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt                                                                                        >  1:10045102/1‑96 (MQ=255)

    taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt                                                                                        >  2:11453741/1‑96 (MQ=255)

    taAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttt                                                                                        <  1:301402/96‑1 (MQ=255)

    taAGTGGCATTGCCGCCAAAATATTCGCAGCTGTAGCCCGCTGAATATCTGCTTGGTAACCCCATCGCCGGTTGCAATACTAAACGCTGGCC‑tttt                                                                                        >  1:7723985/1‑96 (MQ=255)

      aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑tttttt                                                                                      <  1:1159162/96‑2 (MQ=255)

      aGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAAGACAAAACGCTGGCC‑tttttt                                                                                      <  1:8931687/96‑2 (MQ=255)

        tGGGATTGCCGCCAAAAGATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTACCCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑ttttttat                                                                                    <  2:11907669/96‑4 (MQ=255)

              tGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGc                                                                               >  2:7021887/1‑96 (MQ=255)

                ccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCa                                                                             >  1:12129662/1‑96 (MQ=255)

                ccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCa                                                                             >  2:10388839/1‑96 (MQ=255)

                ccgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCa                                                                             >  2:12400726/1‑96 (MQ=255)

                 cgccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAg                                                                            <  1:14091646/96‑1 (MQ=255)

                  gccAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGt                                                                           <  1:11187457/96‑1 (MQ=255)

                  gacAAAATATTCGTAGCTGTAGCCCGCTGAATCTCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCact                                                                           <  1:10555272/94‑3 (MQ=255)

                    cAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTga                                                                         >  2:9154006/1‑96 (MQ=255)

                     aaaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTgag                                                                        <  2:8315024/96‑1 (MQ=255)

                      aaaTATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTgaga                                                                       >  1:922272/1‑96 (MQ=255)

                        atatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAtt                                                                     >  2:5564428/1‑96 (MQ=255)

                         tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAttt                                                                    <  2:6879287/96‑1 (MQ=255)

                         tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAttt                                                                    >  2:3045288/1‑96 (MQ=255)

                         tatTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAttt                                                                    >  1:8622244/1‑96 (MQ=255)

                          atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTACCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAtttt                                                                   <  2:7457307/96‑1 (MQ=255)

                          atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAtttt                                                                   <  2:10036351/96‑1 (MQ=255)

                          atTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAtttt                                                                   >  2:1942143/1‑96 (MQ=255)

                           ttCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAttttt                                                                  <  1:81313/96‑1 (MQ=255)

                            ttgTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTa                                                                 >  1:11787820/3‑96 (MQ=255)

                             cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAc                                                                <  1:4083834/96‑1 (MQ=255)

                             cGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAc                                                                >  2:10749769/1‑96 (MQ=255)

                              gTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAcc                                                               >  1:6132942/1‑96 (MQ=255)

                               tAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTAccc                                                              >  2:11349047/1‑96 (MQ=255)

                                 gCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCAc                                                            >  1:3394088/1‑96 (MQ=255)

                                  cTGTAGCCCGCTGAATATCCGCTTGGTAACCCCTTCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACt                                                           >  2:14079016/1‑96 (MQ=255)

                                   tGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACtt                                                          >  1:14338384/1‑96 (MQ=255)

                                    gTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTc                                                         >  2:6372639/1‑96 (MQ=255)

                                     tAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACGTCg                                                        <  2:12567039/96‑1 (MQ=255)

                                     caGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCg                                                        >  1:11421796/2‑96 (MQ=255)

                                      aGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGa                                                       >  1:10926836/1‑96 (MQ=255)

                                       gCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGAc                                                      >  1:4536347/1‑96 (MQ=255)

                                           gCTGCATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa                                                  <  2:9401295/96‑1 (MQ=255)

                                           gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa                                                  >  1:5954836/1‑96 (MQ=255)

                                           gCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATa                                                  >  2:4837199/1‑96 (MQ=255)

                                            cTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATaa                                                 <  1:4805167/96‑1 (MQ=255)

                                              gAATATCCGCTTGGTAGCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcc                                               <  1:8442048/96‑1 (MQ=255)

                                               aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc                                              <  2:8815063/96‑1 (MQ=255)

                                               aaTATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAccc                                              >  2:874183/1‑96 (MQ=255)

                                                atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc                                             >  1:1292164/1‑96 (MQ=255)

                                                atatCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAAcccc                                             >  1:1361782/1‑96 (MQ=255)

                                                     cGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGcac                                        >  1:13547557/1‑96 (MQ=255)

                                                        ttGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACAtt                                     <  1:6971089/96‑1 (MQ=255)

                                                         tGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTc                                    >  2:13128731/1‑96 (MQ=255)

                                                          gctAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCa                                   >  1:9418194/3‑96 (MQ=255)

                                                           gTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAt                                  <  1:5338998/96‑1 (MQ=255)

                                                             aaCCCCATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGc                                >  1:2682972/1‑96 (MQ=255)

                                                               ccccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc                              >  2:59946/1‑96 (MQ=255)

                                                               ccccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGccc                              <  2:12706270/96‑1 (MQ=255)

                                                                 ccATCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCgg                            >  2:7173217/1‑96 (MQ=255)

                                                                   aTCGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTa                          >  1:13063525/1‑96 (MQ=255)

                                                                     cGCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAAt                        <  1:7856920/96‑1 (MQ=255)

                                                                      gCCGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATg                       <  2:1123020/96‑1 (MQ=255)

                                                                       ccGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                      >  1:13935189/1‑96 (MQ=255)

                                                                       ccGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGa                      <  2:1579615/96‑1 (MQ=255)

                                                                        cGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                     >  2:4197076/1‑96 (MQ=255)

                                                                        cGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAc                     >  2:13810455/1‑96 (MQ=255)

                                                                        cGGTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAAGAACCCCTGCACATTCATGCCCGGTAATGAc                     >  1:10272431/1‑96 (MQ=255)

                                                                         ggTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                    >  2:13493732/1‑96 (MQ=255)

                                                                         ggTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                    <  1:1662651/96‑1 (MQ=255)

                                                                         ggTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                    >  1:7197348/1‑96 (MQ=255)

                                                                         ggTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                    <  1:630051/96‑1 (MQ=255)

                                                                         ggTTGCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGAcc                    <  1:2588544/96‑1 (MQ=255)

                                                                             tcAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGCGATTTTTCCCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat                <  1:1941255/95‑1 (MQ=255)

                                                                             gCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCAAGCCCGGTAATGACCGgat                <  1:13272254/96‑1 (MQ=255)

                                                                             gCAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGAATTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgat                <  2:2346771/96‑1 (MQ=255)

                                                                              cAATACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatg               >  2:3199887/1‑96 (MQ=255)

                                                                               aaTACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatga              >  1:2345812/1‑96 (MQ=255)

                                                                                aTACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGgatgat             >  2:7629579/1‑96 (MQ=255)

                                                                                 tACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGCCAATAACCCCGGCACATTCATGCCCGGTAAATCCCGgatgtgt            >  1:13136/1‑93 (MQ=255)

                                                                                 tACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt            >  2:963604/1‑96 (MQ=255)

                                                                                 tACAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAtt            >  1:3217656/1‑96 (MQ=255)

                                                                                  aCAAAACGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGAttt           <  2:1292164/96‑1 (MQ=255)

                                                                                    aaaaCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc         <  2:10249023/96‑1 (MQ=255)

                                                                                    aaaaCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTc         <  1:7626943/96‑1 (MQ=255)

                                                                                     aaaCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCt        >  1:5488258/1‑96 (MQ=255)

                                                                                      aaCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa       >  2:2727806/1‑96 (MQ=255)

                                                                                      aaCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTa       >  2:12218035/1‑96 (MQ=255)

                                                                                       aCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa      >  1:384820/1‑96 (MQ=255)

                                                                                       aCGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaa      <  1:14191964/96‑1 (MQ=255)

                                                                                        cGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa     >  2:381578/1‑96 (MQ=255)

                                                                                        cGCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTaaa     >  2:7772650/1‑96 (MQ=255)

                                                                                         gCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAt    >  2:11661099/1‑96 (MQ=255)

                                                                                         gCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAt    >  1:1237245/1‑96 (MQ=255)

                                                                                         gCTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAt    >  2:6268769/1‑96 (MQ=255)

                                                                                          cTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAtc   >  2:6580922/1‑96 (MQ=255)

                                                                                          cTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAtc   <  1:9097726/96‑1 (MQ=255)

                                                                                          cTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAtc   >  2:8085055/1‑96 (MQ=255)

                                                                                          cTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAtc   >  1:4248237/1‑96 (MQ=255)

                                                                                          cTGGCCTTTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAAtc   >  1:12660303/1‑96 (MQ=255)

CATATAAGTGGCATTGCCGCCAAAATATTCGTAGCTGTAGCCCGCTGAATATCCGCTTGGTAACCCCATCGCCGGTTGCAATACAAAACGCTGGCC‑TTTTTATATTTGCCAGTGAGATTTTTACCCACTTCGACAATAACCCCGGCACATTCATGCCCGGTAATGACCGGATGATTTTCTAAATCG  >  NC_000913/3075120‑3075305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`