Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,123,585 +G coding (953/2286 nt) glcF ← glycolate oxidase iron‑sulfur subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,123,5821.G99.5% 1627.2 / ‑1.8 427coding (956/2286 nt)glcFglycolate oxidase iron‑sulfur subunit
Reads supporting (aligned to +/- strand):  ref base . (0/2);  new base G (226/199);  total (226/201)
Fisher's exact test for biased strand distribution p-value = 2.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 487 total aligned reads displayed.

CAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCG  >  NC_000913/3123487‑3123672
                                                                                                |                                                                                          
cAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGc                                                                                             >  1:10032418/1‑96 (MQ=255)
 aaaGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCg                                                                                           >  1:792108/1‑96 (MQ=255)
 aaaGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCg                                                                                           <  2:8257184/96‑1 (MQ=255)
  aaGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCgg                                                                                          >  2:4791960/1‑96 (MQ=255)
     ttCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCggggc                                                                                       >  1:3126431/1‑94 (MQ=255)
     ttCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCggggc                                                                                       >  2:4134160/1‑94 (MQ=255)
      tCCGCGTACATGCGACCGGGGGTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCggggca                                                                                      >  1:8207522/1‑93 (MQ=255)
       ccGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCggggcaa                                                                                     >  2:6338047/1‑92 (MQ=255)
         gcgTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAg                                                                                    >  1:14143674/1‑96 (MQ=255)
          cgTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGc                                                                                   >  2:1493372/1‑96 (MQ=255)
          cgTACATGCCACCGGGGTTAAACAAGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGTTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGc                                                                                   <  1:6315819/96‑1 (MQ=255)
           gTACAGGCGCCCGGGGTTAAACTCGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGct                                                                                  <  1:11348522/96‑2 (MQ=255)
               aTGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGccacca                                                                              >  2:300976/1‑96 (MQ=255)
                tGCGACCGGGGTTAACCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAt                                                                             <  1:11973713/96‑1 (MQ=255)
                 gCGACCGGGGTTAAACCCGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAtc                                                                            <  2:3122983/96‑1 (MQ=255)
                  cGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAtct                                                                           >  1:5654054/1‑96 (MQ=255)
                   gACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATGGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCGACCAtctg                                                                          >  1:4084883/1‑95 (MQ=255)
                   gACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAtctc                                                                          <  1:12099654/96‑1 (MQ=255)
                   gACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAtctc                                                                          >  1:10860902/1‑96 (MQ=255)
                   gACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCAtctc                                                                          >  2:8976071/1‑96 (MQ=255)
                    cccGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTcc                                                                         <  2:13507465/95‑1 (MQ=255)
                     cgggggTTAAACACGCCGCAAGGGCCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCg                                                                        >  1:11822734/3‑96 (MQ=255)
                     ccGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCg                                                                        <  2:6177485/96‑1 (MQ=255)
                      cGGGGTTAACCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCgg                                                                       <  1:9401101/96‑1 (MQ=255)
                        gggTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCa                                                                     >  2:5981448/1‑96 (MQ=255)
                          tttAACCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACt                                                                   <  1:12361126/95‑1 (MQ=255)
                             aaaCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTata                                                                <  1:10668943/96‑3 (MQ=255)
                             aaaCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTaaa                                                                >  1:9250374/1‑96 (MQ=255)
                             aaaCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTaaa                                                                >  1:7640215/1‑96 (MQ=255)
                             aaaCACGCCGCAAGGGTCGAGCTGCTGTGTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTaaa                                                                >  2:13902551/1‑96 (MQ=255)
                              aaCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAg                                                               >  1:6636664/1‑96 (MQ=255)
                              aaCACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAg                                                               >  2:9726087/1‑96 (MQ=255)
                                cacGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCg                                                             >  2:7138050/1‑96 (MQ=255)
                                 acGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCgg                                                            <  1:9880104/96‑1 (MQ=255)
                                 acGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCgg                                                            >  2:7994803/1‑96 (MQ=255)
                                   gccgcAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGt                                                          <  1:7785359/96‑1 (MQ=255)
                                    ccgcAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGGAAAGCCACCATCTCCGGCACTACAGCggacc                                                         >  1:3377712/1‑93 (MQ=255)
                                    ccgcAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTc                                                         <  2:13076389/96‑1 (MQ=255)
                                    ccgcAAGGGTCGAGCGGCTGTTTAAGCTGCTGGTGATAGCGAAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTc                                                         <  1:8771248/96‑1 (MQ=255)
                                      gcAAGGGTCGAGCTGCTGTTTAAGCTGCTGGGGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGc                                                       >  2:11701127/1‑96 (MQ=255)
                                       cAAGGGTGTAGCTGCCGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCa                                                      <  1:6549998/96‑1 (MQ=255)
                                       cAAGGGTCGAGCTGCTGTTTAAGCTGCTGGGGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCa                                                      >  2:14030655/1‑96 (MQ=255)
                                        aaGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCAt                                                     >  2:5865650/1‑96 (MQ=255)
                                            gTCGAGCTGCTGGTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGAcc                                                 >  1:6169131/1‑96 (MQ=255)
                                            gTCGAGCTGCGGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGAcc                                                 <  2:1249083/96‑1 (MQ=255)
                                             tgcaGCTGCTGTTTAAGCTGCTGGTCATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGCCCg                                                <  1:9112120/93‑1 (MQ=255)
                                             tCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCg                                                <  1:5859146/96‑1 (MQ=255)
                                              ggAGCTGCTGTTTCAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGc                                               >  1:13858918/2‑96 (MQ=255)
                                              cGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGTACTAAAGCGGGTCGCATGACCGc                                               >  1:12565190/1‑96 (MQ=255)
                                              cGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGc                                               >  1:70648/1‑96 (MQ=255)
                                               gAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCggc                                              >  1:10433057/1‑94 (MQ=255)
                                               gAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGcc                                              >  2:7881757/1‑96 (MQ=255)
                                                 gctgctGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAg                                            >  1:2202058/1‑96 (MQ=255)
                                                  ctgctgTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGc                                           >  1:7340770/1‑96 (MQ=255)
                                                    gctgTTTAAGCTGCTGGTGGTAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGGCCCATGACCGCCAGCGt                                         >  1:2781193/1‑96 (MQ=255)
                                                      tgTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCCCCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTg                                       <  1:2672743/96‑1 (MQ=255)
                                                      tgTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTg                                       <  2:8162356/96‑1 (MQ=255)
                                                        tttAAGCTGCTGTTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCCCCCTCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCg                                     <  2:13269685/96‑1 (MQ=255)
                                                        tttAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCg                                     <  2:683510/96‑1 (MQ=255)
                                                         ttAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCgg                                    >  2:5194723/1‑96 (MQ=255)
                                                         ttAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCgg                                    <  2:10292176/96‑1 (MQ=255)
                                                          tAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCggg                                   <  2:879074/96‑1 (MQ=255)
                                                          tAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCggg                                   >  2:4406303/1‑96 (MQ=255)
                                                          tAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCggg                                   <  1:8390435/96‑1 (MQ=255)
                                                          tAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCggg                                   <  2:7633582/96‑1 (MQ=255)
                                                           aaGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgc                                  >  1:11635416/1‑96 (MQ=255)
                                                            aGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcg                                 <  2:11993680/96‑1 (MQ=255)
                                                               tgctgGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcgatg                              <  1:503786/96‑1 (MQ=255)
                                                                gctgGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcgatgc                             >  2:12304150/1‑96 (MQ=255)
                                                                 ctgGTGATTGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcgatgcg                            >  1:12973792/1‑96 (MQ=255)
                                                                 ctgGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcgatgcg                            >  2:12678458/1‑96 (MQ=255)
                                                                 ctgGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcgatgcg                            <  2:3844101/96‑1 (MQ=255)
                                                                  tgGTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGgcgatgcga                           >  2:6935579/1‑96 (MQ=255)
                                                                    gTGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGcgatgcgatg                         >  2:2568009/1‑96 (MQ=255)
                                                                     tGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATgg                        <  1:747885/96‑1 (MQ=255)
                                                                     tGATAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATgg                        <  2:535861/96‑1 (MQ=255)
                                                                       aTAGCGGAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGAt                      <  2:5068337/96‑1 (MQ=255)
                                                                         aGCGAAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGAttt                    <  2:3501103/96‑1 (MQ=255)
                                                                             gAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGAtt                <  1:10307576/96‑1 (MQ=255)
                                                                             gAATAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGAtt                <  2:11024074/96‑1 (MQ=255)
                                                                              aaTAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTg               >  2:9330619/1‑96 (MQ=255)
                                                                               tcaaaGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGt              <  1:833503/94‑1 (MQ=255)
                                                                                tAAAGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTc             >  1:4749733/1‑96 (MQ=255)
                                                                                  aaGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCt           >  2:4504825/1‑96 (MQ=255)
                                                                                  aaGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCt           >  1:5378929/1‑96 (MQ=255)
                                                                                  aaGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCt           <  2:2417260/96‑1 (MQ=255)
                                                                                  aaGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCt           >  1:44773/1‑96 (MQ=255)
                                                                                  aaGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCt           <  1:4406303/96‑1 (MQ=255)
                                                                                   gggAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTc          <  1:6866329/95‑1 (MQ=255)
                                                                                   aagAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTc          >  1:14319197/3‑96 (MQ=255)
                                                                                   aGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTc          <  1:1278351/96‑1 (MQ=255)
                                                                                   aGGAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGAGGGGTTTGATTGGCCTc          >  1:5262656/1‑96 (MQ=255)
                                                                                    ggAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCg         >  1:383442/1‑96 (MQ=255)
                                                                                    ggAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCg         <  2:10494838/96‑1 (MQ=255)
                                                                                     gAGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCgg        >  2:10773952/1‑96 (MQ=255)
                                                                                      aGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGc       <  2:11478468/96‑1 (MQ=255)
                                                                                      aGCCGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGc       >  1:13240093/1‑96 (MQ=255)
                                                                                         cGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGt    <  1:1853632/96‑1 (MQ=255)
                                                                                         cGATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGt    <  2:7491424/96‑1 (MQ=255)
                                                                                          gATAGCGGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTc   <  2:11902666/96‑1 (MQ=255)
                                                                                                |                                                                                          
CAAAGTTCCGCGTACATGCGACCGGGGTTAAACACGCCGCAAGGGTCGAGCTGCTGTTTAAGCTGCTGGTGATAGCGGAATAAAGGAGCCGATAGCGGGCAAAGCCACCATCTCCGGCACTAAAGCGGGTCGCATGACCGCCAGCGTTGCGGGCGATGCGATGGATTTGATTGTCCTCGGCTGTCG  >  NC_000913/3123487‑3123672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: