Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 3,537,405 | +GC | intergenic (+61/‑394) | b3407 → / → feoA | hypothetical protein/ferrous iron transport protein A |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,537,404 | 1 | . | C | 98.8% | 1536.0 / 7.4 | 408 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
Reads supporting (aligned to +/- strand): ref base . (1/4); new base C (209/194); total (210/198) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.03e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
* | NC_000913 | 3,537,404 | 2 | . | G | 98.8% | 1509.3 / 7.2 | 407 | intergenic (+60/‑395) | b3407/feoA | hypothetical protein/ferrous iron transport protein A |
Reads supporting (aligned to +/- strand): ref base . (1/4); new base G (208/194); total (209/198) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.04e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01 |
Only 100 of 457 total aligned reads displayed.
GATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑C‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATA > NC_000913/3537309‑3537490 || gatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAGCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGACAGATAAGGCGTT‑‑Ca < 1:12882995/96‑1 (MQ=255) atgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCAGGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑c < 2:13914130/96‑1 (MQ=255) atgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑c < 1:6431758/96‑1 (MQ=255) atgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑c < 1:11923854/96‑1 (MQ=255) tgCGCTCGCCGCGCCAATGGTCAAAAAACGTGAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑Catg < 1:10645225/96‑3 (MQ=255) cgcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cgcc < 2:9618731/96‑4 (MQ=255) gcTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑cgccg > 2:801544/1‑92 (MQ=255) ggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTg > 2:8641709/1‑96 (MQ=38) ggcggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTg > 1:9190077/1‑96 (MQ=38) ggcggcAATGGGAAAAACACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCCCGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTg < 2:7181253/96‑1 (MQ=37) tggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGc < 1:13485033/95‑1 (MQ=38) cggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGc > 1:12423837/1‑96 (MQ=38) cggcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGc < 2:8923398/96‑1 (MQ=38) acgcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGc > 1:11776763/3‑96 (MQ=37) gcAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaa < 1:10456006/96‑1 (MQ=38) cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaac > 1:7462566/1‑96 (MQ=38) cAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCGGGCaac > 2:4076119/1‑96 (MQ=37) cAATGGGCAAAAAACGTTAAACCCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaac < 2:1723597/96‑1 (MQ=37) aaggggCAAAAATCTGTAAACCCCGGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGTCAGATAAGCCGTT‑‑CACGC‑‑CGCATCTGGCaacg < 1:9763808/93‑1 (MQ=21) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTATGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacg < 1:12726204/96‑1 (MQ=37) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacg > 1:7167482/1‑96 (MQ=38) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacg > 2:9885685/1‑96 (MQ=38) aaTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacg < 2:11757040/96‑1 (MQ=38) aTGGGCGAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTTGCaacga > 2:11238057/1‑96 (MQ=37) tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacgaa > 1:10027496/1‑96 (MQ=38) gggCAAAAAACGTTAAACGCCGGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacgaac < 2:1281604/96‑1 (MQ=37) gggCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGGAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCaacgaac > 1:3648793/1‑96 (MQ=38) gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCCCGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGc < 1:11646992/96‑1 (MQ=37) gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGc > 1:623662/1‑96 (MQ=38) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGcc < 2:6164017/96‑1 (MQ=38) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGcc < 1:11397932/96‑1 (MQ=38) cAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCGGGCAACGAACGcc > 1:4673339/1‑96 (MQ=37) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCt > 1:8413563/1‑96 (MQ=38) aaaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCt < 1:6843436/96‑1 (MQ=38) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCTCGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCtt < 2:8269603/96‑1 (MQ=37) aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCtt > 1:13617744/1‑96 (MQ=38) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGc > 2:4351842/1‑96 (MQ=38) aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGc < 2:4925089/96‑1 (MQ=38) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCt < 1:8728217/96‑1 (MQ=38) aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCt > 1:1740499/1‑96 (MQ=38) ttAACCGCCCGTACTGGCTTACGGTTCGAATTTGCACGAAATCGTAGGGAAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGAc < 2:7019668/96‑1 (MQ=37) gCCCGTACGGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATaaaa < 1:11081108/96‑1 (MQ=37) cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg > 2:1200915/1‑96 (MQ=38) cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg < 2:4209614/96‑1 (MQ=38) cccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAg > 1:3489469/1‑96 (MQ=38) ccGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGt < 2:3216294/96‑1 (MQ=38) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg > 1:2762473/1‑96 (MQ=38) cGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTg < 1:14414402/96‑1 (MQ=38) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGGAACGAACGCCTTGCCTGACATAAAAGTGc > 1:6656850/1‑96 (MQ=37) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc > 1:9633707/1‑96 (MQ=38) gTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGc > 2:1992786/1‑96 (MQ=38) tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc < 1:3194244/96‑1 (MQ=38) tACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc > 2:123400/1‑96 (MQ=38) cTGGCCTACGGTTGGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg < 1:801544/96‑1 (MQ=37) cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg < 2:2583222/96‑1 (MQ=38) cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg > 1:7066150/1‑96 (MQ=38) tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGACTGATAGGGCGTT‑‑CACGC‑‑CGTGTCTGGCACCGACCGCCTTGCCTGACATAAAAGTGCCGga < 1:14016314/96‑1 (MQ=255) ggacTACGGTTCGAATATGCACGAAAACGTAGGGCAGATAAGGCGTC‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgag < 2:9288209/93‑1 (MQ=37) ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa > 1:1307519/1‑96 (MQ=38) ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa > 2:5563089/1‑96 (MQ=38) ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGaa > 1:3110714/1‑96 (MQ=38) cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAat < 2:5143369/96‑1 (MQ=38) cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAat < 1:252/96‑1 (MQ=38) cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAat < 2:13575552/96‑1 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 1:8249849/1‑96 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 1:10221503/1‑96 (MQ=38) aCGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAatat > 2:7657836/1‑96 (MQ=38) cGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtc > 2:4995154/1‑96 (MQ=38) ggTTCGATTTGCCACGAATTCGGGGGGCAGATAGGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct < 2:2517701/96‑1 (MQ=25) ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct > 2:7512605/1‑96 (MQ=38) ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct < 2:5803315/96‑1 (MQ=38) ggTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct > 1:14182972/1‑96 (MQ=38) ttCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc < 1:5843358/96‑1 (MQ=38) tacGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc > 1:9379476/3‑96 (MQ=37) cGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCgg > 1:1622614/1‑96 (MQ=38) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc > 2:14287117/1‑96 (MQ=38) gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGc > 1:2260018/1‑96 (MQ=38) aaTTTCCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCa < 2:8367098/96‑1 (MQ=37) aTTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAt > 1:10859975/1‑96 (MQ=38) tttGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAtt < 2:10706970/96‑1 (MQ=38) aCGAAATAGTGGGGCAGATAAGGCTTTAACG‑‑C‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTAt < 1:5168090/96‑1 (MQ=255) cGAAATCGTAGGGCAGATAAGGCGGT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCGGGAGAATATCTCCGGCATTTTTAtt > 1:2103956/1‑96 (MQ=37) gAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGCGAATATCTCCGGCATTTTTATTc > 2:6776146/1‑96 (MQ=37) gAAATCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTc > 2:10272824/1‑96 (MQ=38) tCGTAGGTCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca < 2:11123443/96‑1 (MQ=37) tCGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGACCGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca < 2:3700231/96‑1 (MQ=37) tCGTAGGGCAGATAAGGCGTC‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca < 1:121263/96‑1 (MQ=38) tCGTAGGCTAGATAAGGCGTC‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca < 1:4899630/96‑1 (MQ=37) cGTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAg < 2:10156708/96‑1 (MQ=38) gTAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc < 2:13414578/96‑1 (MQ=38) gTAGGGCAGATAAGGCGTT‑‑CA‑‑CGACGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGc < 1:10120247/96‑1 (MQ=39) tAGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGcc < 2:2324196/96‑1 (MQ=38) aGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa > 2:13662829/1‑96 (MQ=38) aGGGCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCa < 1:4255037/96‑1 (MQ=38) ggCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCaaa < 2:6453585/96‑1 (MQ=38) gCAGATAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc > 1:5433771/1‑96 (MQ=39) gATAAGGCGTTCCCG‑‑C‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa < 2:2831817/96‑1 (MQ=255) aTAAGGCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCat < 1:4351842/96‑1 (MQ=39) tacggCGTT‑‑CACGC‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCata < 1:4151525/93‑1 (MQ=39) aGGCGTT‑‑CACTC‑‑CGCATCTGGCAACGAACTCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataat < 1:388168/96‑1 (MQ=255) || GATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTT‑‑CA‑‑C‑‑CGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATA > NC_000913/3537309‑3537490 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |