BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 279335	NA (NA)	610 (1.060)	175/190	0.1	98.1%	coding (252/339 nt)	b4505	hypothetical protein
*	?	NC_000913	370982 =	12 (0.020)	610 (1.060)	175/190	0.1	98.1%	coding (535/882 nt)	mhpC	2‑hydroxy‑6‑ketonona‑2,4‑dienedioic acid hydrolase

Only 100 of 527 total aligned reads displayed.

GCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTTATT  >  NC_000913/279242‑279430

gctCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagc                                                                                               >  1:5325739/1‑96 (MQ=31)

gctCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagc                                                                                               <  2:9285457/96‑1 (MQ=31)

 ctCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagca                                                                                              >  2:12548714/1‑96 (MQ=32)

  tCAGCTAAACAACAGAGCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                             <  1:12771240/96‑1 (MQ=18)

  tCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                             <  1:4146169/96‑1 (MQ=33)

  tCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTAcagcag                                                                                             <  1:1979753/96‑1 (MQ=33)

   cAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACagcagc                                                                                            <  2:4441682/96‑1 (MQ=33)

    aGCTAAACAACAGACCGAGAAAGTCACTGAAGTTCAAAACACCGAAAGAGATAATTGTAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCt                                                                                           <  2:12639903/96‑1 (MQ=255)

     gCTAAACAACAGACCGGGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtt                                                                                          >  2:10924465/1‑96 (MQ=25)

      cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttt                                                                                         <  2:11339741/96‑1 (MQ=37)

      cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttt                                                                                         <  1:2711770/96‑1 (MQ=37)

      cTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttt                                                                                         >  1:13296333/1‑96 (MQ=37)

        aaaCAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttt                                                                                       <  2:6999289/96‑1 (MQ=37)

        aaaCAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttt                                                                                       >  1:1829909/1‑96 (MQ=37)

        aaaCAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttt                                                                                       <  1:3808528/96‑1 (MQ=37)

          acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                                                                     <  2:2938456/96‑1 (MQ=38)

          acaacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCttttttt                                                                                     <  1:11230663/96‑1 (MQ=38)

           caacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTa                                                                                    <  2:10564948/96‑1 (MQ=39)

            aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCtttttttta                                                                                   <  1:11058824/96‑3 (MQ=38)

            aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTaa                                                                                   <  2:8225755/96‑1 (MQ=40)

            aacaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTAACAGATTGAATCTACAGCAGCTTTTTTTaa                                                                                   <  1:7728882/96‑1 (MQ=255)

             acaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAat                                                                                  <  1:9572214/96‑1 (MQ=255)

             acaGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAat                                                                                  >  1:6331868/1‑96 (MQ=255)

             acaGACCGAGAAAGACACTCAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAat                                                                                  >  2:3410737/1‑96 (MQ=255)

              caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAata                                                                                 <  2:14198140/96‑1 (MQ=255)

              caGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCAGTGACAGATTGAATCTACAGCAGCTTTTTTTActa                                                                                 >  2:8772793/1‑96 (MQ=255)

                gACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATg                                                                               <  1:4996861/96‑1 (MQ=255)

                  ccGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATgcc                                                                             <  1:10635715/96‑3 (MQ=255)

                  ccGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTc                                                                             <  2:1177654/96‑1 (MQ=255)

                  ccGAGAAAGACACTGAAATTCAAAACCCCGAAAGAGATAATTGAAAGGGGGGTTTCATTGACAGATTGAATCTACAGCAGCTTTTTTCAATATGTc                                                                             <  1:12968304/96‑1 (MQ=14)

                   cGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTcc                                                                            <  2:562244/96‑1 (MQ=255)

                    gagaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTccc                                                                           >  1:6054120/1‑96 (MQ=255)

                     agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCg                                                                          <  2:3119437/96‑1 (MQ=255)

                     agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCg                                                                          <  1:10019955/96‑1 (MQ=255)

                     agaAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCg                                                                          <  1:13499999/96‑1 (MQ=255)

                       aaaGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGtt                                                                        >  1:2937830/1‑96 (MQ=255)

                       aaaGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGtt                                                                        <  2:5735530/96‑1 (MQ=255)

                        aaGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtc                                                                       <  1:1593531/96‑1 (MQ=255)

                         aGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcg                                                                      >  1:7069117/1‑96 (MQ=255)

                         aGACACTGAAGTTCAAAACACCGAAAGAGATAATGGAAAGGGGTG‑TGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgt                                                                     <  2:6283307/96‑1 (MQ=255)

                          gACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgt                                                                     >  1:5553626/1‑96 (MQ=255)

                          gACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgt                                                                     <  2:6554953/96‑1 (MQ=255)

                           agacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCACGTtcgtc                                                                    >  1:9031052/3‑96 (MQ=255)

                           acacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                                                                    >  1:9411580/1‑96 (MQ=255)

                           acacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTtcgtc                                                                    >  1:13670778/1‑96 (MQ=255)

                            cacTGAAGTTCAAAACACCGAAAGAGATTATTGAAAGGGGTGTTGCATTGACAGATTGAATCTCCAGCCGCTTTTTTTAATATGTCCCGTtcgtcg                                                                   <  1:5631532/96‑1 (MQ=255)

                            cacTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGCGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAAAATGTCCCGTtcgtcg                                                                   <  1:458420/96‑1 (MQ=255)

                             acTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCgg                                                                  <  1:2450949/96‑1 (MQ=255)

                             acTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCgg                                                                  >  2:11461312/1‑96 (MQ=255)

                              cTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGt                                                                 >  1:6616558/1‑96 (MQ=255)

                              cTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGt                                                                 <  1:11596636/96‑1 (MQ=255)

                               tGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTa                                                                <  2:14389296/96‑1 (MQ=255)

                               tGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTa                                                                <  2:5481897/96‑1 (MQ=255)

                               tGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTa                                                                <  2:4784968/96‑1 (MQ=255)

                                  aGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                             <  1:8259665/96‑1 (MQ=255)

                                  aGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAcc                                                             <  1:9803329/96‑1 (MQ=255)

                                   gTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                            <  2:7563001/96‑1 (MQ=255)

                                   gTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAAccc                                                            <  2:9741935/96‑1 (MQ=255)

                                     tCAAAACACCGAATGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGt                                                          >  1:13871941/1‑96 (MQ=255)

                                        aaaCACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGCATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTc                                                       <  2:1926476/96‑1 (MQ=255)

                                          acacCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAg                                                     <  2:4024215/96‑1 (MQ=255)

                                           cacCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGc                                                    <  1:3441117/96‑1 (MQ=255)

                                           cacCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGc                                                    >  2:13121726/1‑96 (MQ=255)

                                             ccGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGGTCGTCGGTAACCCGTTTCAGctc                                                  >  1:10191280/1‑96 (MQ=255)

                                             ccGAAAGAGATAATTGAAAGGGGGGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGctc                                                  >  1:3316766/1‑96 (MQ=255)

                                               gAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                                >  2:8430461/1‑96 (MQ=255)

                                               gAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                                <  2:7907073/96‑1 (MQ=255)

                                               gAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                                <  1:1185860/96‑1 (MQ=255)

                                               gAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCtt                                                >  1:14394268/1‑96 (MQ=255)

                                                 aaGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTc                                              <  1:8581923/96‑1 (MQ=255)

                                                      aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGgag                                         >  2:1299370/1‑96 (MQ=255)

                                                      aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGgag                                         <  2:3270809/96‑1 (MQ=255)

                                                      aTAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGgag                                         >  1:10949987/1‑96 (MQ=255)

                                                        aaTTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAc                                       <  1:7922378/96‑1 (MQ=255)

                                                          ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcgg                                     <  2:2360198/96‑1 (MQ=255)

                                                          ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcgg                                     >  2:2484717/1‑96 (MQ=255)

                                                          ttGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcgg                                     <  1:6899114/96‑1 (MQ=255)

                                                           tGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggc                                    <  1:1422706/96‑1 (MQ=255)

                                                           tGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggc                                    <  2:12061571/96‑1 (MQ=255)

                                                             aaaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGAcggcgg                                  <  2:6054120/96‑1 (MQ=255)

                                                              aaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGa                                 >  2:4347380/1‑96 (MQ=255)

                                                              aaGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGa                                 <  2:3649575/96‑1 (MQ=255)

                                                              aaGGGGGGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGa                                 >  2:8987438/1‑96 (MQ=255)

                                                               aGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAt                                >  2:503005/1‑96 (MQ=255)

                                                               aGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAt                                <  2:386314/96‑1 (MQ=255)

                                                                 gggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtct                              <  1:2183608/96‑1 (MQ=255)

                                                                  ggTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGCCGGCGGAtctc                             <  1:575790/96‑1 (MQ=255)

                                                                   gtgtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGAtcttg                            >  2:2736169/1‑94 (MQ=255)

                                                                   gtgtTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCg                            <  2:13557221/96‑1 (MQ=255)

                                                                       tGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGGTCTCGGCCt                        >  2:1028206/1‑96 (MQ=255)

                                                                        gCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGATCTTTCTGGAGACGGCGGATCTCGGCCTg                       >  1:8786005/1‑96 (MQ=255)

                                                                         cATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGa                      >  2:7252113/1‑96 (MQ=255)

                                                                           ttGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGc                    <  1:12465425/96‑1 (MQ=255)

                                                                               cAGATTGAATCTACAGCATCTTTTTTTAATATGTCCCGTACGTCGGTAACCCGGTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCt                >  1:12620251/1‑96 (MQ=255)

                                                                               cAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCt                >  1:4366444/1‑96 (MQ=255)

                                                                               cAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCt                <  1:3576436/96‑1 (MQ=255)

                                                                                aGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTg               <  2:9482902/96‑1 (MQ=255)

                                                                                 gATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGa              <  2:10044351/96‑1 (MQ=255)

                                                                                    tGAATCTACAGCAGCTTTTTTTAATTTGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTg           <  1:3064555/96‑1 (MQ=255)

                                                                                        tCTACAGCAGCTTTTTTTAGTATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCt       >  2:5345731/1‑96 (MQ=255)

GCTCAGCTAAACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACAGCAGCTTTTTTTAATATGTCCCGTTCGTCGGTAACCCGTTTCAGCTCTTTCTGGAGACGGCGGATCTCGGCCTGAGCATCTGACTGTTCTTTATT  >  NC_000913/279242‑279430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.