Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3421336–3421870 3422240–3421880 11–905 331 [325] [316] 327 [rrfD]–[rrlD] [rrfD],[rrlD]

Only 100 of 327 total aligned reads displayed.

TGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAG  >  NC_000913/3422193‑3422336
                                                |                                                                                               
 gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCCGCTCCATGCAGACTGGCGTCCACACTTCTa                                                 >  2:14118106/1‑96 (MQ=17)
  tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                                <  2:10111630/96‑1 (MQ=33)
  tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                                <  2:3755273/96‑1 (MQ=33)
   ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                               <  1:7290840/96‑1 (MQ=33)
   ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                               >  1:1681636/1‑96 (MQ=33)
   ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                               >  2:5576371/1‑96 (MQ=33)
    cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                                              >  1:3082787/1‑96 (MQ=33)
    cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                                              <  2:8619123/96‑1 (MQ=33)
    cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                                              <  1:8069648/96‑1 (MQ=33)
    cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGGCCACACTTCTAAGc                                              >  2:13399633/1‑96 (MQ=18)
       aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGGATTTCAAGGTCGGCTCCATGCAGACTGGCGGCCACACTTCTAAGCCTc                                           >  1:6655354/1‑96 (MQ=16)
        aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                          >  1:719695/1‑96 (MQ=33)
        aCCCGGATTACGGGTAAAAGTTAGAACATCAAACATTAAAGGGGGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                          >  1:6445515/1‑96 (MQ=255)
          ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                        <  1:3556310/96‑1 (MQ=33)
          ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                        >  1:1803107/1‑96 (MQ=33)
            ggATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                      >  1:8363620/1‑96 (MQ=33)
            ggATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                      >  1:8989681/1‑96 (MQ=33)
             gATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCCCCt                                     >  1:11671589/1‑96 (MQ=18)
              aTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa                                    >  2:6317232/1‑96 (MQ=33)
              aTTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTa                                    <  1:11991670/96‑1 (MQ=33)
               ttACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTAt                                   >  1:7143018/1‑96 (MQ=33)
                tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGGAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc                                  >  1:10246162/1‑96 (MQ=18)
                tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc                                  <  2:2819515/96‑1 (MQ=33)
                 aCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATATCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                 >  2:7616050/1‑96 (MQ=18)
                 aCGGGTCAACGTTAGAAAATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCCCCTATcc                                 <  1:4166943/96‑1 (MQ=16)
                  cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt                                <  2:10780289/96‑1 (MQ=34)
                  cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt                                <  2:4750960/96‑1 (MQ=34)
                  cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt                                >  2:11696918/1‑96 (MQ=33)
                   gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                               >  1:757553/1‑96 (MQ=33)
                   gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                               >  1:7929257/1‑96 (MQ=33)
                   gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                               >  2:8957547/1‑96 (MQ=33)
                    ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCCCACTTCTAAGCCTCCCACCTATCCTac                              <  1:1952688/96‑1 (MQ=18)
                    ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac                              >  2:11147391/1‑96 (MQ=33)
                     gTCAACGTTAGAACATCAAACATTACAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                             <  1:4629095/96‑1 (MQ=18)
                     gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                             <  1:7855062/96‑1 (MQ=33)
                       cAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTAcaca                           >  2:13134650/1‑96 (MQ=33)
                        aaCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGGGTCCACACTTCTAAGCCTCCCACCTATCCTCCCCAt                          >  2:13297026/1‑96 (MQ=255)
                        aaCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                          >  2:7422485/1‑96 (MQ=33)
                          cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCa                        >  2:5030358/1‑96 (MQ=33)
                          cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCa                        <  2:10584382/96‑1 (MQ=33)
                           gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCGTGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCaa                       >  2:12871761/1‑96 (MQ=18)
                           gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCaa                       >  1:6133423/1‑96 (MQ=33)
                           gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCaa                       <  2:12383861/96‑1 (MQ=34)
                            ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAg                      >  1:5910836/1‑96 (MQ=33)
                             tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg                     >  2:5107315/1‑96 (MQ=33)
                              aGAACATCACACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACTCTCCTAAGCCTCCCACCTATCCTACACATCAAGGc                    <  1:8731408/96‑1 (MQ=255)
                              aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGc                    >  2:7718745/1‑96 (MQ=33)
                               gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCt                   >  1:9103074/1‑96 (MQ=33)
                                aaCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTc                  >  2:3349605/1‑96 (MQ=33)
                                  cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCaa                >  2:3931369/1‑96 (MQ=18)
                                   aTCACACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAAt               <  1:2777319/96‑1 (MQ=18)
                                   aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAAt               <  2:9355602/96‑1 (MQ=33)
                                   aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAAt               >  1:2631711/1‑96 (MQ=33)
                                    tCAAACATTAAAGGGTGTTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATg              >  1:1543380/1‑96 (MQ=18)
                                    tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTGAATg              >  1:14072589/1‑96 (MQ=18)
                                    tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATg              >  1:11205839/1‑96 (MQ=33)
                                     cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt             >  2:695980/1‑96 (MQ=33)
                                      aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt            >  2:584924/1‑96 (MQ=33)
                                      aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt            <  2:9598127/96‑1 (MQ=33)
                                      aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt            <  1:1014427/96‑1 (MQ=33)
                                      aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt            >  1:9543175/1‑96 (MQ=33)
                                      aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt            <  1:5438660/96‑1 (MQ=34)
                                       aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc           <  1:2427769/96‑1 (MQ=33)
                                       aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc           >  1:6859066/1‑96 (MQ=33)
                                       aaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc           <  2:4420599/96‑1 (MQ=34)
                                        aCATTAAAGGGTGGTATTTCAGGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGttaa          >  1:3919632/1‑94 (MQ=16)
                                        aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa          <  1:13946820/96‑1 (MQ=34)
                                        aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa          <  1:5576371/96‑1 (MQ=34)
                                         cATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTccg         <  1:9598217/96‑3 (MQ=18)
                                         cATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg         >  1:1354075/1‑96 (MQ=33)
                                          aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCact        <  1:11771300/96‑3 (MQ=21)
                                          aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt        >  2:2030877/1‑96 (MQ=33)
                                          aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt        >  2:6858252/1‑96 (MQ=33)
                                          aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt        <  2:12063358/96‑1 (MQ=33)
                                          aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt        >  1:3301001/1‑96 (MQ=34)
                                          aTTAAAGGGTGGTATTTCAAGGTCGGCTCCATCCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt        <  2:2378805/96‑1 (MQ=18)
                                           ttAAAGGGGGGTATTTCAAGGACGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATAAAGGCTCAATGTTCAggg       >  1:12952307/1‑94 (MQ=11)
                                            tAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCCCCTATCCTACACATCAAGGCTCAATGTTCAntgt      <  2:4314099/96‑1 (MQ=18)
                                            tAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt      <  1:5759898/96‑1 (MQ=34)
                                            tAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt      <  1:9157404/96‑1 (MQ=34)
                                             aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCAAACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc     <  2:1681636/96‑1 (MQ=18)
                                             aaaGGGTGGTATTTCAAGGTCGGATCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc     <  1:12589381/96‑1 (MQ=21)
                                              taGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa    >  1:11447517/2‑96 (MQ=18)
                                              aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa    <  2:4077774/96‑1 (MQ=33)
                                              aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa    >  2:10928663/1‑96 (MQ=34)
                                              aaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCa    >  1:11892880/1‑96 (MQ=33)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   >  1:10058710/1‑96 (MQ=33)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   <  2:9285903/96‑1 (MQ=33)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   <  2:8226870/96‑1 (MQ=34)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   >  2:275040/1‑96 (MQ=34)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   <  1:5091493/96‑1 (MQ=33)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   <  1:13170464/96‑1 (MQ=34)
                                               aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACGTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   >  1:4071258/1‑96 (MQ=18)
                                               aGGGAGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACCCTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCaa   <  2:6445515/96‑1 (MQ=16)
                                                gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTCCACATCAAGGCTCAATGTTCAGTGTCAAg  <  2:4008272/96‑1 (MQ=18)
                                                gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAg  >  1:5038211/1‑96 (MQ=33)
                                                gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAg  <  2:8463243/96‑1 (MQ=33)
                                                gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAg  >  1:4326601/1‑96 (MQ=33)
                                                gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAg  >  1:11054945/1‑96 (MQ=33)
                                                gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAg  >  2:4487367/1‑96 (MQ=34)
                                                |                                                                                               
TGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAG  >  NC_000913/3422193‑3422336

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑