BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,302,782	A→G	N2S (AAC→AGC)	oppD →	OppD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,302,782	0	A	G	99.8%	2258.1 / NA	566	N2S (AAC→AGC)	oppD	OppD
Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (281/284); minor base C (0/1); total (281/285)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 584 total aligned reads displayed.

TTCCTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAACGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTACCCCGG  >  NC_000913/1302689‑1302874

ttCCTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGGGCAGCCATGAGCg                                                                                            >  2:7844379/1‑96 (MQ=255)

 tCCTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGt                                                                                           <  1:4478485/96‑1 (MQ=255)

  ccTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTa                                                                                          >  1:1282838/1‑96 (MQ=255)

    tCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAAt                                                                                        <  2:7415272/96‑1 (MQ=255)

     cGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAAtt                                                                                       <  2:1415124/96‑1 (MQ=255)

     cGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAAtt                                                                                       >  2:8531134/1‑96 (MQ=255)

     cGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAAtt                                                                                       <  1:2470329/96‑1 (MQ=255)

       tggtgACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGa                                                                                     >  2:10879765/1‑96 (MQ=255)

       tagtgACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGa                                                                                     >  1:12092909/3‑96 (MQ=255)

        ggtgACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGaa                                                                                    >  1:7575189/1‑96 (MQ=255)

         gtgACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGaaa                                                                                   >  1:1413826/1‑96 (MQ=255)

         gtgACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGCTAAGGAGTGCAGCCATGAGCGTAATTGaaa                                                                                   >  2:4155964/1‑96 (MQ=255)

          tgACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAAc                                                                                  <  1:5001272/96‑1 (MQ=255)

           gACGCTGTTTTGTTTCAACTTTATCGGCGCTGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACt                                                                                 <  1:5773102/96‑1 (MQ=255)

           gACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACt                                                                                 >  1:13484275/1‑96 (MQ=255)

            aCGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTg                                                                                >  1:13349538/1‑96 (MQ=255)

            aCGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGGGCAGCCATGAGCGTAATTGAAACTg                                                                                >  1:5162457/1‑96 (MQ=255)

             cGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGc                                                                               <  2:8773070/96‑1 (MQ=255)

                  ttttgtttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACtg                                                                          <  1:8641125/96‑1 (MQ=255)

                   tttgtttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACttt                                                                         <  1:10783755/96‑3 (MQ=255)

                      gtttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGTGCGTAATTCAAACTGCAACTGTGcc                                                                      >  2:3336532/1‑96 (MQ=255)

                      gtttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGcc                                                                      <  1:13904836/96‑1 (MQ=255)

                      gtttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGcc                                                                      <  2:2069091/96‑1 (MQ=255)

                      gtttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGcc                                                                      >  2:6390960/1‑96 (MQ=255)

                      ggttCAACGTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGcc                                                                      >  1:10519373/3‑96 (MQ=255)

                        ttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGc                                                                    >  2:11992704/1‑96 (MQ=255)

                        ttCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGc                                                                    >  2:5677003/1‑96 (MQ=255)

                          cAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTc                                                                  <  1:13055227/96‑1 (MQ=255)

                            aCTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGc                                                                <  2:14321021/96‑1 (MQ=255)

                             cTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGca                                                               >  1:5538831/1‑96 (MQ=255)

                             cTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGca                                                               <  1:6207247/96‑1 (MQ=255)

                              tttATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAGGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGGAACTGCAACTGTGCCGCTCGcac                                                              >  2:12618016/1‑96 (MQ=255)

                               ttATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGcaca                                                             <  2:6422251/96‑1 (MQ=255)

                               ttATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGcaca                                                             <  2:3576124/96‑1 (MQ=255)

                                tATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCacaa                                                            >  1:3573164/1‑96 (MQ=255)

                                tATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCacaa                                                            >  1:7800349/1‑96 (MQ=255)

                                 aTCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCacaac                                                           >  2:12413120/1‑96 (MQ=255)

                                     gCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCacaacaaca                                                       <  2:13240271/96‑1 (MQ=255)

                                     gCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCacaacaaca                                                       <  2:8240894/96‑1 (MQ=255)

                                     gCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGGGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCacaacaaca                                                       >  2:13061586/1‑96 (MQ=255)

                                      cGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAg                                                      >  1:7425532/1‑96 (MQ=255)

                                      cGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGCGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAg                                                      >  2:12746956/1‑96 (MQ=255)

                                       gATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAgg                                                     >  1:3101828/1‑96 (MQ=255)

                                       gATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAgg                                                     >  2:5940647/1‑96 (MQ=255)

                                       gATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAgg                                                     <  2:7059500/96‑1 (MQ=255)

                                        aTGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGc                                                    >  1:2276903/1‑96 (MQ=255)

                                         tGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCt                                                   <  1:9109133/96‑1 (MQ=255)

                                          ggCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTg                                                  <  1:10002688/96‑1 (MQ=255)

                                          gacTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTg                                                  >  1:11501386/3‑96 (MQ=255)

                                           gCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGa                                                 >  2:1012935/1‑96 (MQ=255)

                                            cTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTgcc                                                <  1:9369515/96‑3 (MQ=255)

                                               gCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCa                                             <  2:10987500/96‑1 (MQ=255)

                                                cGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCAc                                            >  2:2498157/1‑96 (MQ=255)

                                                cGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCAc                                            <  1:1489191/96‑1 (MQ=255)

                                                 gTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCAct                                           >  2:1907419/1‑96 (MQ=255)

                                                 gTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCAct                                           <  2:9039142/96‑1 (MQ=255)

                                                 gTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCAct                                           <  2:7692020/96‑1 (MQ=255)

                                                    aTGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCActgct                                        <  2:6876670/96‑1 (MQ=255)

                                                        ccTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAAc                                    >  1:7159620/1‑96 (MQ=255)

                                                         cTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACg                                   <  1:6907726/96‑1 (MQ=255)

                                                             aCCCGAAAGATCGTTAAGGAGTGTAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGaa                               <  1:10185137/96‑1 (MQ=255)

                                                             aCCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGaa                               >  2:4558182/1‑96 (MQ=255)

                                                             aCCCGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGaa                               >  1:3800181/1‑96 (MQ=255)

                                                                cGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGa                            >  1:12409147/1‑96 (MQ=255)

                                                                cGAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGa                            <  2:1564231/96‑1 (MQ=255)

                                                                 gAAAGATCGTTAAGGAGTGCAGCCATGAGCGTGATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGAt                           >  1:64184/1‑96 (MQ=255)

                                                                 gAAAGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGAt                           <  2:10586912/96‑1 (MQ=255)

                                                                   aaGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGGTGACGCACTGCTTAACGTGAAAGAttt                         >  1:11718392/1‑96 (MQ=255)

                                                                   aaGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGAttt                         >  1:8915808/1‑96 (MQ=255)

                                                                    aGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTg                        >  1:4667069/1‑96 (MQ=255)

                                                                    aGATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTg                        >  1:11273374/1‑96 (MQ=255)

                                                                    aGATCGTTAAGGAGTGCAGCCATAAGCGTAATTGAAACTGCAACTGTGCCGGTCGCACAACAACAGGCTGCCGCACTGCTGAACGTGAAAGATTTg                        <  1:13734325/96‑1 (MQ=255)

                                                                     gATCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGc                       <  2:3060112/96‑1 (MQ=255)

                                                                      aTCGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCg                      <  2:12162739/96‑1 (MQ=255)

                                                                        cGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAGCAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCgtg                    >  1:2634485/1‑96 (MQ=255)

                                                                        cGTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCgtg                    <  2:4998275/96‑1 (MQ=255)

                                                                         gTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCgtgt                   <  2:1349537/96‑1 (MQ=255)

                                                                         gTTAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAAATTTGCgtgt                   >  2:11707351/1‑96 (MQ=255)

                                                                          ttAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTc                  <  2:393054/96‑1 (MQ=255)

                                                                           tAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCa                 <  1:1831755/96‑1 (MQ=255)

                                                                           tAAGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCa                 <  2:122264/96‑1 (MQ=255)

                                                                            aaGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCAc                <  2:13586029/96‑1 (MQ=255)

                                                                            aaGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCAc                >  2:1761848/1‑96 (MQ=255)

                                                                            aaGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAAATTTGCGTGTCAc                <  1:10942947/96‑1 (MQ=255)

                                                                             aGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCTCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCAcc               <  2:11328938/96‑1 (MQ=255)

                                                                             aGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCAcc               >  2:2303749/1‑96 (MQ=255)

                                                                             aGGAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGCTAAAGATTTGCGTGTGAcc               >  1:1968764/1‑96 (MQ=255)

                                                                              ggAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCt              >  2:9375757/1‑96 (MQ=255)

                                                                              ggAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGAAGCACTGCTGAACGTGAAAGATTTGCGTGTCACCt              <  1:3378805/96‑1 (MQ=255)

                                                                               gAGTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCtt             >  2:13922863/1‑96 (MQ=255)

                                                                                 gTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTa           >  1:9768489/1‑96 (MQ=255)

                                                                                 gTGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTa           <  1:3971700/96‑1 (MQ=255)

                                                                                  tGCAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAg          <  2:4909544/96‑1 (MQ=255)

                                                                                    cAGCCATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTa        <  2:5538831/96‑1 (MQ=255)

                                                                                     aGCCATGAGCGTAAGTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTAc       >  2:6213627/1‑96 (MQ=255)

                                                                                       ccATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTAccc     >  1:8419510/1‑96 (MQ=255)

                                                                                       ccATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTAccc     <  2:5234403/96‑1 (MQ=255)

                                                                                        cATGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTAcccc    <  1:6653123/96‑1 (MQ=255)

                                                                                         aTGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTACCCCg   <  1:9544019/96‑1 (MQ=255)

                                                                                          tGAGCGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTACCCCgg  <  2:9644151/96‑1 (MQ=255)

TTCCTCGTGGTGACGCTGTTTTGTTTCAACTTTATCGGCGATGGCTTGCGTGATGCCCTCGACCCGAAAGATCGTTAAGGAGTGCAGCCATGAACGTAATTGAAACTGCAACTGTGCCGCTCGCACAACAACAGGCTGACGCACTGCTGAACGTGAAAGATTTGCGTGTCACCTTTAGTACCCCGG  >  NC_000913/1302689‑1302874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`