Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,216,746 G→C S252S (TCC→TCG yehZ ← putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,216,7460GC99.8% 1861.1 / ‑5.3 478S252S (TCC→TCGyehZputative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (209/268);  total (210/268)
Fisher's exact test for biased strand distribution p-value = 4.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.99e-01

Only 100 of 517 total aligned reads displayed.

AATGCTGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACGGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAG  >  NC_000913/2216653‑2216840
                                                                                             |                                                                                              
 aTGCTGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGAc                                                                                             >  1:12923087/1‑96 (MQ=255)
  tGCTGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACt                                                                                            >  1:9185095/1‑96 (MQ=255)
    cTGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCa                                                                                          <  1:11949539/96‑1 (MQ=255)
     tGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCAc                                                                                         <  1:3108406/96‑1 (MQ=255)
     tGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCAc                                                                                         <  1:12784653/96‑1 (MQ=255)
     tGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCCCAACACCGACTCAc                                                                                         >  2:10556742/1‑96 (MQ=255)
      ggCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACg                                                                                        >  2:2962029/1‑96 (MQ=255)
      ggCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACg                                                                                        <  2:6885242/96‑1 (MQ=255)
      ggCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACg                                                                                        <  2:9251405/96‑1 (MQ=255)
        cATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCCTTTGCGGATACTCCCTCAACACCGACTCACGca                                                                                      <  1:13194081/96‑1 (MQ=255)
        cATTCAGTGGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGca                                                                                      <  1:599538/96‑1 (MQ=255)
          ttCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGcacc                                                                                    <  2:5948848/96‑1 (MQ=255)
           tCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGcacca                                                                                   >  1:10602441/1‑96 (MQ=255)
            cAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGCCTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACAACGACTCACGcaccac                                                                                  <  2:5425244/96‑1 (MQ=255)
             aGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCCCTGTGCCATTTGCGGATACTCCCTCAGCACCGACTCACGCACCACt                                                                                 <  1:8096807/96‑1 (MQ=255)
              gTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTg                                                                                <  1:6860528/96‑1 (MQ=255)
               ttGCTGCAATGTTTTTGCATCGAGGCTGGCTAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACttg                                                                               <  1:11467654/96‑3 (MQ=255)
               ttGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAACCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACttg                                                                               >  2:90061/1‑94 (MQ=255)
               ttGCTGCAATGTGTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGTCTCACGCACCACTgg                                                                               <  1:2304685/96‑1 (MQ=255)
                tgctgcAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGt                                                                              <  1:1950520/96‑1 (MQ=255)
                 gctgcAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCCCCACTGGTg                                                                             >  2:7177848/1‑96 (MQ=255)
                  ctgcAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCGCAACACCGACCCACGCACCACCGGGGc                                                                            >  2:1603972/1‑96 (MQ=255)
                   tgcAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCa                                                                           <  1:9885228/96‑1 (MQ=255)
                    gcAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAg                                                                          >  2:10851926/1‑96 (MQ=255)
                    gcAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAg                                                                          >  1:10376624/1‑96 (MQ=255)
                     cAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAgg                                                                         <  1:5775132/96‑1 (MQ=255)
                     cAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAgg                                                                         >  2:6995925/1‑96 (MQ=255)
                     cAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAgg                                                                         <  2:8840455/96‑1 (MQ=255)
                      aaTGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGgc                                                                        <  2:9500053/96‑1 (MQ=255)
                        tGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGgcgc                                                                      >  2:7606133/1‑96 (MQ=255)
                         gTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGgcgcc                                                                     <  1:8851262/96‑2 (MQ=255)
                            tttGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACCCCGACTCACGCACCACTGGTGCAGGCGCGTAg                                                                  <  2:8512225/96‑1 (MQ=255)
                            tttGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAg                                                                  <  1:14357951/96‑1 (MQ=255)
                              tGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACCCACCACTGGTGCAGGCGCGTAGAt                                                                >  1:8658158/1‑96 (MQ=255)
                               gggtCGCGGCGGCCGAAGACTGGCTGTTGTCACTGTGCCATTTGCGGATCCTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATa                                                               <  1:452600/93‑1 (MQ=255)
                               gCATCGAGCCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATa                                                               <  2:4396903/96‑1 (MQ=255)
                                cgtCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAg                                                              <  2:11185700/94‑1 (MQ=255)
                                 aTCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAGCACCGACTCACGCACCACTGCTGCAGGCGCGTAGCTaag                                                             <  1:10149435/96‑3 (MQ=255)
                                 aTCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAgg                                                             >  1:2481111/1‑96 (MQ=255)
                                 aTCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACCCACCACTGGTGCAGGCGCGTAGATatg                                                             >  1:4220027/1‑94 (MQ=255)
                                 aTCGAGGCTGGCGAAGACGGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAgg                                                             >  1:2215804/1‑96 (MQ=255)
                                   cGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGtt                                                           <  2:12169517/96‑1 (MQ=255)
                                    gAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGGGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTg                                                          >  1:3364971/1‑96 (MQ=255)
                                    gAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTg                                                          >  1:11013094/1‑96 (MQ=255)
                                    gAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGGAGAGAGGTTg                                                          >  1:6279852/1‑96 (MQ=255)
                                     aGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGc                                                         <  2:4660073/96‑1 (MQ=255)
                                     aGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGc                                                         >  2:7467790/1‑96 (MQ=255)
                                      ggCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGca                                                        <  1:10013260/96‑1 (MQ=255)
                                        cTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACCCCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGcaca                                                      <  2:12477781/96‑1 (MQ=255)
                                        cTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGcaca                                                      <  1:9602145/96‑1 (MQ=255)
                                        cTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGcaca                                                      <  1:13777760/96‑1 (MQ=255)
                                         tGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACCCCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCacac                                                     <  1:1666358/96‑1 (MQ=255)
                                         tGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCacac                                                     >  2:4066765/1‑96 (MQ=255)
                                          ggCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACAcc                                                    >  2:3874836/1‑96 (MQ=255)
                                           gcgcAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCATCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCt                                                   <  1:2882801/96‑1 (MQ=255)
                                              aaGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGc                                                >  2:12565455/1‑96 (MQ=255)
                                              aaGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGc                                                <  1:6684904/96‑1 (MQ=255)
                                               aGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCg                                               <  2:2467678/96‑1 (MQ=255)
                                                 aCTGGCTGTAGCCACTGTGCCATTTGCGGATTCTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGa                                             <  2:14285254/96‑1 (MQ=255)
                                                 aCTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGa                                             <  2:4916674/96‑1 (MQ=255)
                                                 aCTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGa                                             >  2:8158006/1‑96 (MQ=255)
                                                  cTGGCTGTAGCCACTGTGCCATTTGCGTATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGAt                                            <  1:7756053/96‑1 (MQ=255)
                                                   tGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATc                                           <  2:13515366/96‑1 (MQ=255)
                                                   tGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATc                                           >  2:10009663/1‑96 (MQ=255)
                                                    ggCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCg                                          <  2:1134798/96‑1 (MQ=255)
                                                       tGTAGCCACTGTGCCATTTGTGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCtt                                       >  1:2659688/1‑96 (MQ=255)
                                                        gTAGCCACTGTGCCATTTGCGGATCCTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTa                                      <  1:3888305/96‑1 (MQ=255)
                                                        gTAGCCACTGTGCCATTTGCGGATACACCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTa                                      <  1:12400434/96‑1 (MQ=255)
                                                          aGCCACTGTGCCATTTGCGGATTCTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAg                                    <  2:9619343/96‑1 (MQ=255)
                                                          aGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAg                                    >  2:14056729/1‑96 (MQ=255)
                                                          aGCCACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAg                                    <  2:11741299/96‑1 (MQ=255)
                                                            ccACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGt                                  >  1:3623752/1‑96 (MQ=255)
                                                            ccACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGt                                  >  1:13390875/1‑96 (MQ=255)
                                                             cACTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGtt                                 >  2:2335600/1‑96 (MQ=255)
                                                              aCTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGttt                                <  2:12923087/96‑1 (MQ=255)
                                                               cTGTGCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTg                               >  2:3665662/1‑96 (MQ=255)
                                                                 gtgCCATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCa                             <  2:6440978/96‑1 (MQ=255)
                                                                    ccATTTGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGcc                          >  2:1883474/1‑96 (MQ=255)
                                                                      aTTTGCGGATACTCCCTCAACACCGACTGACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGcccc                        >  2:13905185/1‑96 (MQ=255)
                                                                        ttGCGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAg                      <  1:7610798/96‑1 (MQ=255)
                                                                           cGGATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAgcgc                   <  1:7260569/96‑1 (MQ=255)
                                                                            ggATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGcgcc                  <  1:8300400/96‑1 (MQ=255)
                                                                             gATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGcgccg                 <  2:11597627/96‑1 (MQ=255)
                                                                             gATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGcgccg                 >  2:1191169/1‑96 (MQ=255)
                                                                             gATACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGcgccg                 <  1:1270702/96‑1 (MQ=255)
                                                                              aTACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGcgccgc                >  1:11338383/1‑96 (MQ=255)
                                                                              aTACTCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGcgccgc                <  1:14056729/96‑1 (MQ=255)
                                                                                  tCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTAcc            <  2:6233311/96‑1 (MQ=255)
                                                                                  tCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTAcc            <  2:6541481/96‑1 (MQ=255)
                                                                                  tCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTAcc            <  1:11702289/96‑1 (MQ=255)
                                                                                  tCCCTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGGTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTAcc            >  1:4914337/1‑96 (MQ=255)
                                                                                   cccTCAACCCCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCg           <  2:3426715/96‑1 (MQ=255)
                                                                                   cccTCAACACCGACTCACGCACCCCTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCg           <  2:13262209/96‑1 (MQ=255)
                                                                                   cccTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCg           <  1:5484416/96‑1 (MQ=255)
                                                                                    ccTCAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCgg          <  1:12263389/96‑1 (MQ=255)
                                                                                     cTCAACTCCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCggg         <  1:6976239/96‑1 (MQ=255)
                                                                                       cAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGcc       >  2:7725965/1‑96 (MQ=255)
                                                                                       cAACACCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGcc       <  1:157257/96‑1 (MQ=255)
                                                                                        aaCACCGACTCACGCACCACTGGTGCAGGGGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCg      >  1:12052801/1‑96 (MQ=255)
                                                                                          cacCGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTc    <  2:60469/96‑1 (MQ=255)
                                                                                             |                                                                                              
AATGCTGGCATTCAGTTGCTGCAATGTTTTTGCATCGAGGCTGGCGAAGACTGGCTGTAGCCACTGTGCCATTTGCGGATACTCCCTCAACACGGACTCACGCACCACTGGTGCAGGCGCGTAGATAGGTTGCACACCTTGCGGATCGCTTAAGGTTTGCAGCCCCAGCGCCGCTACCGGGCCGTCAG  >  NC_000913/2216653‑2216840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: