Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,429,527 Δ1 bp coding (40/510 nt) yrdD ← putative DNA topoisomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,429,5260C.100.0% 1064.1 / NA 225coding (41/510 nt)yrdDputative DNA topoisomerase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base . (119/106);  total (119/106)

Only 100 of 241 total aligned reads displayed.

CGATATGTCCATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTATGCTG  >  NC_000913/3429434‑3429614
                                                                                            |                                                                                        
 gATATGTCCATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcg                                                                                         >  2:856753/1‑92 (MQ=255)
 gATATGTCCATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcg                                                                                         >  2:2307473/1‑92 (MQ=255)
  atatGTCCATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcga                                                                                        >  1:5628805/1‑91 (MQ=255)
    atGTCCATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATcgaat                                                                                      >  2:1467513/1‑89 (MQ=255)
        ccATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAAcc                                                                                 >  2:5041744/1‑93 (MQ=255)
         cATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCa                                                                                >  2:641611/1‑93 (MQ=255)
          aTCCGCTGAAGATTTCAGAGGGCGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAg                                                                               >  2:6596883/1‑93 (MQ=255)
          aTCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAg                                                                               <  1:5243342/93‑1 (MQ=255)
           tCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGt                                                                              >  2:5150093/1‑93 (MQ=255)
           tCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGt                                                                              <  1:4180166/93‑1 (MQ=255)
           tCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGt                                                                              >  2:2946687/1‑93 (MQ=255)
            ccGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGtt                                                                             >  1:993915/1‑93 (MQ=255)
             cGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTc                                                                            >  2:3896015/1‑93 (MQ=255)
              gCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCa                                                                           <  2:4296013/93‑1 (MQ=255)
                tGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGNAANGGNCCGTGTTTCACGGATCGAATAACCAGTTCAGc                                                                         >  1:5007033/1‑93 (MQ=255)
                 gAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGcc                                                                        <  1:6112547/93‑1 (MQ=255)
                  aaGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGccc                                                                       >  2:5279950/1‑93 (MQ=255)
                   aGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGcccc                                                                      >  2:185463/1‑93 (MQ=255)
                   aGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGcacc                                                                      >  2:5344014/1‑93 (MQ=255)
                    gATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCg                                                                     >  2:4958345/1‑93 (MQ=255)
                       ttCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCAc                                                                  <  2:4367636/93‑1 (MQ=255)
                          agagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGGATAACCAGATCAGTCCCGCAAttt                                                               >  1:5491258/1‑93 (MQ=255)
                          agagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACttt                                                               <  1:5437632/93‑1 (MQ=255)
                           gagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTg                                                              >  2:3506319/1‑93 (MQ=255)
                           gagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTg                                                              <  2:3696742/93‑1 (MQ=255)
                           gagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTg                                                              >  1:4669883/1‑93 (MQ=255)
                           gagGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTg                                                              <  1:1076204/93‑1 (MQ=255)
                            agGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATGGAATAACCAGTTCACCCCCCCACttttg                                                             >  1:6286480/1‑91 (MQ=255)
                            agGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTgg                                                             <  1:598690/93‑1 (MQ=255)
                            agGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTgg                                                             <  1:1331411/93‑1 (MQ=255)
                             ggacggacGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTggg                                                            <  2:5554091/93‑1 (MQ=255)
                             ggacggacGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTggg                                                            >  1:6350233/1‑93 (MQ=255)
                             ggacggacGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTggg                                                            >  2:2041363/1‑93 (MQ=255)
                                  gacgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGa                                                       >  1:4389817/1‑93 (MQ=255)
                                  gacgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGa                                                       >  2:1426379/1‑93 (MQ=255)
                                   acgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGAc                                                      <  1:1566519/93‑1 (MQ=255)
                                    cgTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACt                                                     <  2:3555965/93‑1 (MQ=255)
                                      tAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCa                                                   >  1:795509/1‑93 (MQ=255)
                                       aGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCat                                                  <  1:290804/93‑1 (MQ=255)
                                         tCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCatta                                                >  2:1786279/1‑93 (MQ=255)
                                           acacGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCattatt                                              <  1:1135426/93‑1 (MQ=255)
                                           acacGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCattatt                                              <  1:2880349/93‑1 (MQ=255)
                                           acacGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCattatt                                              >  1:3518377/1‑93 (MQ=255)
                                             acGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTAc                                            >  2:2446967/1‑93 (MQ=255)
                                             acGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTAc                                            >  2:1345946/1‑93 (MQ=255)
                                                 cGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCAc                                        <  2:4901070/93‑1 (MQ=255)
                                                 cGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCAc                                        >  2:3231396/1‑93 (MQ=255)
                                                  ggATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCAcc                                       <  1:4910234/93‑1 (MQ=255)
                                                  ggATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCAcc                                       <  1:2282495/93‑1 (MQ=255)
                                                  ggATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCAcc                                       >  1:5145593/1‑93 (MQ=255)
                                                   gATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCg                                      <  2:5995033/93‑1 (MQ=255)
                                                   gATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCg                                      <  1:3504835/93‑1 (MQ=255)
                                                    aTACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGt                                     >  2:5890093/1‑93 (MQ=255)
                                                     tACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTg                                    <  1:481139/93‑1 (MQ=255)
                                                     tACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTg                                    >  2:6309908/1‑93 (MQ=255)
                                                      aCTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGa                                   >  1:165880/1‑93 (MQ=255)
                                                        tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAAc                                 >  1:1029215/1‑93 (MQ=255)
                                                        tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAAc                                 >  1:2928546/1‑93 (MQ=255)
                                                        tgtgAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAAc                                 >  2:257578/1‑93 (MQ=255)
                                                         gtgAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACa                                <  1:1005482/93‑1 (MQ=255)
                                                         gtgAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACa                                >  1:5876810/1‑93 (MQ=255)
                                                         gtgAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACa                                <  2:3314569/93‑1 (MQ=255)
                                                           gAGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGt                              <  1:4517893/93‑1 (MQ=255)
                                                            aGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTg                             <  1:2467205/93‑1 (MQ=255)
                                                            aGCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTg                             <  1:2828331/93‑1 (MQ=255)
                                                             gCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGc                            >  1:3654490/1‑93 (MQ=255)
                                                             gCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGc                            >  1:2618616/1‑93 (MQ=255)
                                                             gCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGc                            <  1:4266078/93‑1 (MQ=255)
                                                             gCATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGc                            >  2:3100350/1‑93 (MQ=255)
                                                              cATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCt                           <  2:5401668/93‑1 (MQ=255)
                                                              cATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCt                           <  1:2522016/93‑1 (MQ=255)
                                                              cATCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCt                           <  1:1948431/93‑1 (MQ=255)
                                                               aTCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTg                          >  1:4341507/1‑93 (MQ=255)
                                                               aTCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTg                          >  1:6417719/1‑93 (MQ=255)
                                                                tCCAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGa                         <  1:3941853/93‑1 (MQ=255)
                                                                 ccAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAt                        >  1:409258/1‑93 (MQ=255)
                                                                 ccAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAt                        <  2:2114197/93‑1 (MQ=255)
                                                                  cAAGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAtt                       <  1:4952400/93‑1 (MQ=255)
                                                                   aaGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGAttt                      >  1:3243906/1‑93 (MQ=255)
                                                                    aGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTc                     <  2:341578/93‑1 (MQ=255)
                                                                    aGAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTc                     <  1:2114908/93‑1 (MQ=255)
                                                                     gAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCg                    >  2:2742367/1‑93 (MQ=255)
                                                                     gAAACGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCg                    >  1:3897582/1‑93 (MQ=255)
                                                                      aaaCGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGc                   >  2:5931818/1‑93 (MQ=255)
                                                                        aCGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCa                 <  2:616516/93‑1 (MQ=255)
                                                                        aCGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCa                 <  1:5687912/93‑1 (MQ=255)
                                                                        aCGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCa                 <  1:3697100/93‑1 (MQ=255)
                                                                         cGGACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCAt                >  2:3853623/1‑93 (MQ=255)
                                                                           gACCGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTACGCCATaa              <  1:6457915/93‑1 (MQ=255)
                                                                            gccGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATaac             <  1:6081732/92‑1 (MQ=255)
                                                                             ccGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATaaca            >  2:5772779/1‑93 (MQ=255)
                                                                             ccGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATaaca            <  2:4647097/93‑1 (MQ=255)
                                                                             ccGTGTTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATaaca            <  2:4380136/93‑1 (MQ=255)
                                                                             ccGTGTTTCCCGGATCGAATAACCAGCTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATaaca            >  2:965994/1‑93 (MQ=255)
                                                                                 gtTTCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACtt        <  2:3761094/93‑1 (MQ=255)
                                                                                  tttCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTa       >  1:5201686/1‑93 (MQ=255)
                                                                                   ttCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTAt      <  2:4801820/93‑1 (MQ=255)
                                                                                   ttCCCGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTAt      <  2:693938/93‑1 (MQ=255)
                                                                                      ccGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTATGCt   >  1:5385511/1‑93 (MQ=255)
                                                                                       cGGATCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCCTTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTATGCTg  <  1:6555029/93‑1 (MQ=255)
                                                                                            |                                                                                        
CGATATGTCCATCCGCTGAAGATTTCAGAGGACGGACGTAGTCACACGCCGGATACTGTGAGCATCCAAGAAACGGACCGTGTTTCCCGGATCCGAATAACCAGTTCAGCCCCGCACTTTGGGCAGGACTCATTATTACGCACCGTGAACAGTGCTGATTTCGCCATAACAACTTATGCTG  >  NC_000913/3429434‑3429614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: