Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,674,812 (T)6→5 coding (1184/2076 nt) yhjG ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,674,8070T.84.9% 739.6 / 155.1 225coding (1189/2076 nt)yhjGhypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (15/19);  new base . (84/107);  total (99/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 262 total aligned reads displayed.

CCGCCCTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGCCAGC  >  NC_000913/3674715‑3674895
                                                                                            |                                                                                        
 cgccCTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCtt                                                                                         >  2:1714514/1‑93 (MQ=255)
    ccTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCttttt                                                                                      <  1:3389204/93‑1 (MQ=255)
    ccTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCttttt                                                                                      <  1:3186332/93‑1 (MQ=255)
    ccTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCttttt                                                                                      <  1:2743791/93‑1 (MQ=255)
    ccTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCttttt                                                                                      <  2:1350666/93‑1 (MQ=255)
    ccTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCttttt                                                                                      <  2:3979832/93‑1 (MQ=255)
     cTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCtttttc                                                                                     <  2:894290/93‑2 (MQ=255)
      tttGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCtttttcg                                                                                    <  2:5564767/93‑3 (MQ=255)
       ttGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCtttttcgc                                                                                   <  2:2097294/93‑4 (MQ=255)
         gAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGccc                                                                                >  1:3096441/1‑93 (MQ=255)
          aaGCGCACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCct                                                                               <  1:2166734/93‑1 (MQ=255)
          aaGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGccc                                                                                <  1:754113/93‑1 (MQ=255)
          aaGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCct                                                                               <  2:3483847/93‑1 (MQ=255)
           aGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCct                                                                               >  2:6261074/1‑93 (MQ=255)
           aGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCct                                                                               <  1:5017353/93‑1 (MQ=255)
           aGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCctt                                                                              >  1:6021762/1‑93 (MQ=255)
           aGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCGTTTTCGCCctt                                                                              >  2:4259118/1‑93 (MQ=255)
             cGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGTCcttct                                                                            <  1:5522557/93‑1 (MQ=255)
               aaCATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCttcttc                                                                          <  2:2485061/93‑1 (MQ=255)
                aCATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTtcttct                                                                         >  2:6087011/1‑93 (MQ=255)
                 cATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTg                                                                        <  1:4258058/93‑1 (MQ=255)
                 cATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCCTCTTCTg                                                                        >  1:5192534/1‑93 (MQ=255)
                 cATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGACCGCATGCTGAACACTTTTTCGCCCTTCTTCTg                                                                        >  2:2386961/1‑93 (MQ=255)
                      gCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAg                                                                   >  2:3928621/1‑93 (MQ=255)
                      gCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAg                                                                   >  1:1091454/1‑93 (MQ=255)
                        aTCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGAc                                                                 >  2:740437/1‑93 (MQ=255)
                         tcaaTAACGTCCAATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGAc                                                                 >  1:3341540/4‑93 (MQ=255)
                         tCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGAc                                                                 >  2:1140328/1‑93 (MQ=255)
                         tCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGAcc                                                                >  1:1024609/1‑93 (MQ=255)
                         tCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGAcc                                                                >  1:3493445/1‑93 (MQ=255)
                           cATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTGTTCGCCCTTCTTCTGTTCAGACCGt                                                              <  2:3335528/93‑1 (MQ=255)
                            aTAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGtt                                                             <  1:259596/93‑1 (MQ=255)
                            aTAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGtt                                                             <  2:4060002/93‑1 (MQ=255)
                            aTAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGtt                                                             <  1:3539332/93‑1 (MQ=255)
                             tAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGttt                                                            <  1:657094/93‑1 (MQ=255)
                             tAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGttt                                                            >  1:3734491/1‑93 (MQ=255)
                             tAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGttt                                                            <  1:6110662/93‑1 (MQ=255)
                             tAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGttt                                                            <  2:2732224/93‑1 (MQ=255)
                              aaCGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGttt                                                            <  2:4432577/93‑1 (MQ=255)
                              aaCGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTc                                                           >  2:4984341/1‑93 (MQ=255)
                                cGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGa                                                         <  1:430964/93‑1 (MQ=255)
                                 gTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGAc                                                        >  1:4734742/1‑93 (MQ=255)
                                  tCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACt                                                       <  2:4644166/93‑1 (MQ=255)
                                   cccATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTCGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACtt                                                      <  1:2071224/93‑1 (MQ=255)
                                    ccATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACttt                                                     <  2:2950809/93‑1 (MQ=255)
                                     cATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACtttt                                                    >  2:6311979/1‑93 (MQ=255)
                                      aTTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACtttt                                                    >  2:5220082/1‑93 (MQ=255)
                                      aTTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTc                                                   >  1:4537256/1‑93 (MQ=255)
                                        ttATCGGTTTCGAAGCGGTCATAAGTCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTg                                                 <  2:1562721/93‑1 (MQ=255)
                                         tATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGc                                                <  2:4160040/93‑1 (MQ=255)
                                         tATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGc                                                >  1:1812892/1‑93 (MQ=255)
                                         tATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGc                                                <  2:5371244/93‑1 (MQ=255)
                                          aTCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGcc                                               >  1:5414233/1‑93 (MQ=255)
                                          aTCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGcc                                               >  2:4884208/1‑93 (MQ=255)
                                             ggTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGcccc                                             >  2:3566507/1‑93 (MQ=255)
                                              gTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCtt                                           >  1:993367/1‑93 (MQ=255)
                                              gTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCtt                                           <  1:855507/93‑1 (MQ=255)
                                              gTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCtt                                           <  2:1461405/93‑1 (MQ=255)
                                              gTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGTTTTTTCGCCCTTCTTCTGTTCAGACAGTTTCGACTTTTCTGCCCCtt                                           <  1:418765/93‑1 (MQ=255)
                                               tttCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGTCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCttt                                          >  1:2343051/1‑93 (MQ=255)
                                               tttCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCttt                                          >  1:1634194/1‑93 (MQ=255)
                                               tttCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCttt                                          <  1:3935875/93‑1 (MQ=255)
                                               tttCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCttt                                          >  2:5856452/1‑93 (MQ=255)
                                                ttCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTc                                         >  2:646648/1‑93 (MQ=255)
                                                ttCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTc                                         <  1:1069840/93‑1 (MQ=255)
                                                 tCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTcc                                        >  1:6255454/1‑93 (MQ=255)
                                                 tCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTcc                                        >  1:5734366/1‑93 (MQ=255)
                                                    aaGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCgg                                     >  1:2769721/1‑93 (MQ=255)
                                                      gCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGaa                                   >  2:2027336/1‑93 (MQ=255)
                                                        ggTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAAt                                  >  1:3266180/1‑93 (MQ=255)
                                                        ggTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATc                                 <  2:3159469/93‑1 (MQ=255)
                                                           cATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAAc                              <  2:4759084/93‑1 (MQ=255)
                                                             tAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGc                            <  2:5512449/93‑1 (MQ=255)
                                                             tAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGc                            <  1:1005866/93‑1 (MQ=255)
                                                             tAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGc                            <  1:2434522/93‑1 (MQ=255)
                                                              aaGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGcc                           <  2:4286745/93‑1 (MQ=255)
                                                               aGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCa                          >  1:4903421/1‑93 (MQ=255)
                                                               aGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCa                          >  1:2661602/1‑93 (MQ=255)
                                                                ggCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCaa                         <  2:3877722/93‑1 (MQ=255)
                                                                ggCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCaa                         >  1:5021547/1‑93 (MQ=255)
                                                                ggCAGCACTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCaa                         >  2:2193709/1‑93 (MQ=255)
                                                                    ggaCTTTGGCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCaa                     <  1:2240212/91‑1 (MQ=255)
                                                                    gcaCTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCaa                     <  2:3680834/93‑1 (MQ=255)
                                                                    gcaCTTTGCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCaa                     <  1:1718150/93‑1 (MQ=255)
                                                                      aCTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAAc                    >  1:2830205/1‑93 (MQ=255)
                                                                           gCCCGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTccc              <  1:3005644/93‑1 (MQ=255)
                                                                             ccGCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAg            <  1:1439958/93‑1 (MQ=255)
                                                                               gCAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGt          <  2:679340/93‑1 (MQ=255)
                                                                                cAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTc         >  2:1639786/1‑93 (MQ=255)
                                                                                cAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTc         >  2:1155040/1‑93 (MQ=255)
                                                                                cAGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTc         <  2:5724566/93‑1 (MQ=255)
                                                                                 aGGCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTcc        >  2:2263083/1‑93 (MQ=255)
                                                                                   gCTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGc      <  2:2862181/93‑1 (MQ=255)
                                                                                    cTGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGcc     >  1:1269331/1‑93 (MQ=255)
                                                                                     tGAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGCCa    <  2:3529201/93‑1 (MQ=255)
                                                                                     tGAACGCTTTTTCACCCTTCTTCTGTTCAGACCGTTTCGCCTTTTCTTCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCACGTCCGCCa    >  1:1794799/1‑93 (MQ=255)
                                                                                      gAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGCCAg   <  2:3247610/93‑1 (MQ=255)
                                                                                      gAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGCCAg   >  1:4007710/1‑93 (MQ=255)
                                                                                      gAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGCCAg   >  1:3799993/1‑93 (MQ=255)
                                                                                      gAACGCTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACAGTCCCAGGTCCGCCAg   >  1:4386074/1‑93 (MQ=255)
                                                                                            |                                                                                        
CCGCCCTTTGAAGCGAACATCGGCATCCATAACGTCCCATTTATCGGTTTCGAAGCGGTCATAAGGCAGCACTTTGCCCGCAGGCTGAACGCTTTTTTCGCCCTTCTTCTGTTCAGACCGTTTCGACTTTTCTGCCCCTTTCCCGGAATCAACGCCAATCAACGGTCCCAGGTCCGCCAGC  >  NC_000913/3674715‑3674895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: