| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,099,661 | (A)5→6 | intergenic (‑19/+164) | yggN ← / ← b2959 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,099,656 | 1 | . | A | 98.8% | 953.7 / 2.8 | 244 | intergenic (‑14/+169) | yggN/b2959 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (3/0); new base A (112/128); total (115/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 | |||||||||||
Only 100 of 259 total aligned reads displayed.
TGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT > NC_000913/3099564‑3099745 | tGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaa > 2:1970870/1‑92 (MQ=255) tGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaa < 2:6207101/93‑2 (MQ=255) gCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCTCTCAAG‑aaaaaat > 2:4284771/1‑91 (MQ=255) gCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaat > 1:1067614/1‑91 (MQ=255) aCTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑aaaaaatca < 2:294886/93‑5 (MQ=255) gTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGcc > 2:3845979/1‑93 (MQ=255) gTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGcc < 2:582384/93‑1 (MQ=255) gTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGcc < 2:686236/93‑1 (MQ=255) gTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGc > 2:1716366/1‑93 (MQ=255) gTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGc > 1:140401/1‑93 (MQ=255) tCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCa < 1:5796841/93‑1 (MQ=255) cGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCAt > 1:4358898/1‑93 (MQ=255) ggCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCAtt > 2:6181050/1‑93 (MQ=255) gCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCAttt < 2:5612208/93‑1 (MQ=255) cGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTg < 1:1650442/93‑1 (MQ=255) gTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGc < 1:4220752/93‑1 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCt < 2:2287844/93‑1 (MQ=255) tGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCt < 1:446826/93‑1 (MQ=255) ggAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCt < 1:1011583/92‑1 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTg > 1:3232787/1‑93 (MQ=255) gAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTg < 1:338939/93‑1 (MQ=255) aGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTgg < 1:2127564/93‑1 (MQ=255) aGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTgg > 2:1151122/1‑93 (MQ=255) gCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGc < 1:6641302/93‑1 (MQ=255) gCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGc > 2:5190197/1‑93 (MQ=255) ggTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGccc > 1:2948570/1‑93 (MQ=255) ggTCATGGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGccc < 1:1786695/93‑1 (MQ=255) cATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAg > 2:4974744/1‑93 (MQ=255) atgcccGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGa < 2:580184/89‑1 (MQ=255) aTTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGa < 2:4265043/93‑1 (MQ=255) ttGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGAt < 1:867527/93‑1 (MQ=255) ttGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGAt > 2:1875794/1‑93 (MQ=255) gCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTg > 2:2559236/1‑93 (MQ=255) cGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGAt > 2:5491740/1‑93 (MQ=255) cGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTATTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGAt > 1:4720471/1‑93 (MQ=255) acggAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACa < 2:1635988/90‑1 (MQ=255) tGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACaaa < 2:401620/93‑1 (MQ=255) tGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACaaa > 2:4684844/1‑93 (MQ=255) gAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg < 1:18473/93‑1 (MQ=255) gAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAg > 2:3657546/1‑93 (MQ=255) aaaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGt > 1:6343990/1‑93 (MQ=255) aaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTa > 2:4582663/1‑93 (MQ=255) aaGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTa < 1:5713410/93‑1 (MQ=255) gTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcg < 2:2143849/93‑1 (MQ=255) tgctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgc > 2:5737658/1‑93 (MQ=255) tgctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgc < 2:5326215/93‑1 (MQ=255) tgctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTAcgc < 1:543113/93‑1 (MQ=255) ctgcCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGt < 1:2527567/93‑1 (MQ=255) gccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGttt > 2:5938619/1‑93 (MQ=255) ccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGtttt > 2:4304769/1‑93 (MQ=255) ccgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGtttt > 1:147635/1‑93 (MQ=255) cgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTc < 2:504129/93‑1 (MQ=255) cgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTc > 2:1845601/1‑93 (MQ=255) cgccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTc > 2:6100214/1‑93 (MQ=255) gccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc < 1:5654184/93‑1 (MQ=255) gccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc < 2:3478141/93‑1 (MQ=255) gccAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTcc > 1:2361196/1‑93 (MQ=255) cagcagCATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAt < 2:3309880/93‑1 (MQ=255) cagcagCATTTTGCGCATCATAGTCTCCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAt < 1:4585728/93‑1 (MQ=255) agcagcATTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATg < 1:2267246/93‑1 (MQ=255) gcagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGc < 2:946140/93‑1 (MQ=255) gcagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGc > 1:5173627/1‑93 (MQ=255) gcagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCACTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGc > 2:6089790/1‑93 (MQ=255) cagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc < 2:2325119/93‑1 (MQ=255) cagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc > 2:1309420/1‑93 (MQ=255) cagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc > 1:1348750/1‑93 (MQ=255) cagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc < 2:6362639/93‑1 (MQ=255) cagcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGcc < 1:6373894/93‑1 (MQ=255) agcaTTTTGCGCATCATAGTGTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCg < 1:4678408/93‑1 (MQ=255) agcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCg < 2:1134561/93‑1 (MQ=255) agcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCg < 1:1582574/93‑1 (MQ=255) gcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCgg < 1:4000291/93‑1 (MQ=255) gcaTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCAAGCCgg > 2:2712931/1‑93 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa < 1:2576804/93‑1 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa > 1:4952634/1‑93 (MQ=255) caTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGa > 2:1469322/1‑93 (MQ=255) aTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt > 1:6075280/1‑93 (MQ=255) aTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt < 2:6653906/93‑1 (MQ=255) aTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt > 1:4045652/1‑93 (MQ=255) aTTTTGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGAt > 2:2257622/1‑93 (MQ=255) ttttGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg > 1:4306463/1‑93 (MQ=255) ttttGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATg < 1:2748294/93‑1 (MQ=255) ttGCGCATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcg < 1:5084133/93‑1 (MQ=255) gcgcATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATgcggc < 1:2005767/93‑1 (MQ=255) gcATCATAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAGAGTACGCGTTTTCCATGCCGGATGCGGCGt > 1:550138/1‑93 (MQ=255) catcatAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTa < 2:6289533/93‑1 (MQ=255) tcatAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaac > 1:5128974/1‑92 (MQ=255) tcatAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTaaa > 1:3325674/1‑93 (MQ=255) tAGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAacac > 1:1883909/1‑93 (MQ=255) aGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAcc < 1:5327697/93‑1 (MQ=255) aGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAcc > 1:4889072/1‑93 (MQ=255) aGTCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACAcc < 1:306796/93‑1 (MQ=255) tCTTCCCTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCtt < 1:6524650/93‑1 (MQ=255) cccTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATcc > 1:5945733/1‑93 (MQ=255) ccTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATccc > 1:954200/1‑93 (MQ=255) cTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCg > 2:6342463/1‑93 (MQ=255) cTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCg < 1:3747643/93‑1 (MQ=255) cTCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCg < 1:2899615/93‑1 (MQ=255) tCAAGAAAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGc > 2:4070412/1‑93 (MQ=255) aaG‑AAAAAGTCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCt > 1:6493618/1‑93 (MQ=255) | TGACGCTGCACTGGTAGTCGGCGTGAGCGGTCATTGCCGTCACTGAAAGTGCTGCCGCCAGCAGCATTTTGCGCATCATAGTCTTCCCTCAAG‑AAAAA‑TCAGGCCAGCATTTGCTGGCCCCAGATTGATAACAAAGTACGCGTTTTCCATGCCGGATGCGGCGTAAACACCTTATCCCGCCT > NC_000913/3099564‑3099745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |