Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,488,295 G→A intergenic (+600/‑595) ald → / → cybB aldehyde dehydrogenase, NAD‑linked/cytochrome b(561)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,488,2950GA86.0% 703.8 / 76.0 250intergenic (+600/‑595)ald/cybBaldehyde dehydrogenase, NAD‑linked/cytochrome b(561)
Reads supporting (aligned to +/- strand):  ref base G (14/21);  new base A (102/113);  total (116/134)
Fisher's exact test for biased strand distribution p-value = 4.68e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.20e-01

Only 100 of 256 total aligned reads displayed.

AGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATCAA  >  NC_000913/1488203‑1488386
                                                                                            |                                                                                           
  gCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACAcc                                                                                           <  2:6617069/93‑1 (MQ=255)
   cATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCa                                                                                          >  2:3711688/1‑93 (MQ=255)
      gAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACgg                                                                                       <  1:5725118/93‑1 (MQ=255)
      gAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACgg                                                                                       >  2:4211980/1‑93 (MQ=255)
      gAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACgg                                                                                       >  2:5470292/1‑93 (MQ=255)
        aTGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGaa                                                                                     <  2:506061/93‑1 (MQ=255)
          ggTCTTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAAc                                                                                   <  1:3359616/93‑1 (MQ=255)
             cgtcATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAAt                                                                                <  2:2882504/93‑1 (MQ=255)
              gtcATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATg                                                                               <  2:80403/93‑1 (MQ=255)
              gtcATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATg                                                                               >  1:4872054/1‑93 (MQ=255)
              gtcATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATg                                                                               <  1:3311126/93‑1 (MQ=255)
                cATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGgt                                                                             >  2:5039308/1‑93 (MQ=255)
                   cGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTc                                                                          <  2:1666415/93‑1 (MQ=255)
                    gTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCg                                                                         <  2:6068712/93‑1 (MQ=255)
                     tGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGt                                                                        <  1:4056228/93‑1 (MQ=255)
                      gCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGtt                                                                       >  2:1210224/1‑93 (MQ=255)
                      gCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGtt                                                                       <  1:698791/93‑1 (MQ=255)
                        cGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGc                                                                     >  2:6034764/1‑93 (MQ=255)
                         gACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGcc                                                                    <  2:3485396/93‑1 (MQ=255)
                         gACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGcc                                                                    >  2:2149436/1‑93 (MQ=255)
                         gACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGcc                                                                    <  1:300037/93‑1 (MQ=255)
                         gACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGcc                                                                    >  1:3121551/1‑93 (MQ=255)
                          aCTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCa                                                                   <  2:5930679/93‑1 (MQ=255)
                          aCTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCa                                                                   >  1:3435576/1‑93 (MQ=255)
                          aCTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCa                                                                   <  2:2999941/93‑1 (MQ=255)
                          aCTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCa                                                                   >  1:4461450/1‑93 (MQ=255)
                            ttCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATc                                                                 >  2:3076867/1‑93 (MQ=255)
                              cTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCa                                                               <  1:6258548/93‑1 (MQ=255)
                              cTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCa                                                               >  1:1639928/1‑93 (MQ=255)
                               tATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCag                                                              >  2:6607732/1‑93 (MQ=255)
                                aTCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCaga                                                             <  2:328725/93‑1 (MQ=255)
                                 tCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCagag                                                            <  2:2764996/93‑1 (MQ=255)
                                 tCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCagag                                                            >  1:773856/1‑93 (MQ=255)
                                   ccGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAgtg                                                          <  1:878211/93‑1 (MQ=255)
                                     gAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtc                                                        <  2:4793366/93‑1 (MQ=255)
                                      aaaCTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtcg                                                       <  2:4943269/93‑1 (MQ=255)
                                      aaaCTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtcg                                                       >  1:1338737/1‑93 (MQ=255)
                                        aCTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtcgtc                                                     <  2:4902921/93‑1 (MQ=255)
                                        aCTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtcgtc                                                     <  2:534109/93‑1 (MQ=255)
                                        aCTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtcgtc                                                     <  1:5571405/93‑1 (MQ=255)
                                        aCTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTgtcgtc                                                     >  2:4839805/1‑93 (MQ=255)
                                           gTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCAtt                                                  >  2:4550400/1‑93 (MQ=255)
                                            tCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTg                                                 >  1:540787/1‑93 (MQ=255)
                                            tCATCCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTg                                                 <  1:2334222/93‑1 (MQ=255)
                                              aTGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGAc                                               >  1:3768352/1‑93 (MQ=255)
                                              aTGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGAc                                               <  1:1848092/93‑1 (MQ=255)
                                               tGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACg                                              <  1:3917707/93‑1 (MQ=255)
                                               tGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACg                                              <  2:1104394/93‑1 (MQ=255)
                                                gCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGt                                             <  2:5101125/93‑1 (MQ=255)
                                                  aaGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTta                                           <  1:2717203/93‑1 (MQ=255)
                                                   aGGCTTTGTCCATCGGCGCAAGACAGTTAGTGGTACATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTtat                                          <  2:899011/93‑1 (MQ=255)
                                                   aGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTtat                                          >  1:1030642/1‑93 (MQ=255)
                                                     gCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATaa                                        >  1:3838261/1‑93 (MQ=255)
                                                      cTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATaaa                                       <  2:2516914/93‑1 (MQ=255)
                                                         tGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGa                                    <  1:3581607/93‑1 (MQ=255)
                                                         tGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGa                                    <  2:3154969/93‑1 (MQ=255)
                                                            ccATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAg                                 >  2:1596057/1‑93 (MQ=255)
                                                             cATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGt                                <  2:635615/93‑1 (MQ=255)
                                                             cATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGt                                <  2:2947909/93‑1 (MQ=255)
                                                             cATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGt                                >  2:3967592/1‑93 (MQ=255)
                                                             cATCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGt                                <  2:3949984/93‑1 (MQ=255)
                                                              aTCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGtt                               >  1:1127399/1‑93 (MQ=255)
                                                               tCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGttt                              <  1:4714833/93‑1 (MQ=255)
                                                               tCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGttt                              <  1:2562133/93‑1 (MQ=255)
                                                               tCGGCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGttt                              <  2:4859171/93‑1 (MQ=255)
                                                                 ggCGCAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTtttc                            >  2:2022803/1‑93 (MQ=255)
                                                                  gcgcAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTtttca                           <  2:1672617/93‑1 (MQ=255)
                                                                   cgcAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTtttcat                          <  2:2211497/93‑1 (MQ=255)
                                                                    gcAAGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTtttcatt                         <  2:2400419/93‑1 (MQ=255)
                                                                      aaGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTtttcatttc                       <  2:815929/93‑1 (MQ=255)
                                                                       aGACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTtttcatttca                      <  1:714390/93‑1 (MQ=255)
                                                                        gACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCAc                     >  1:4543563/1‑93 (MQ=255)
                                                                        gACAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCAc                     >  1:1938296/1‑93 (MQ=255)
                                                                         aCAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCAcc                    <  1:2425320/93‑1 (MQ=255)
                                                                         aCAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCAcc                    <  2:6264626/93‑1 (MQ=255)
                                                                         aCAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAAAGATAGTTTTCATTTCAcc                    <  1:1443244/93‑1 (MQ=255)
                                                                          cAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCg                   <  1:2159091/93‑1 (MQ=255)
                                                                          cAGTTAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCg                   <  1:4662282/93‑1 (MQ=255)
                                                                             ttAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCa                <  1:6044294/93‑1 (MQ=255)
                                                                             ttAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCa                <  1:2211717/93‑1 (MQ=255)
                                                                              tAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAg               <  2:3613814/93‑1 (MQ=255)
                                                                              tAGTGGTGCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAg               <  1:4899159/93‑1 (MQ=255)
                                                                                gtggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAggg             <  2:2033872/93‑1 (MQ=255)
                                                                                gtggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAggg             <  2:4412390/93‑1 (MQ=255)
                                                                                 tggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAggtg            >  1:4226217/1‑91 (MQ=255)
                                                                                 tggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAgggg            >  1:1717059/1‑93 (MQ=255)
                                                                                 tggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAgggg            >  2:5641902/1‑93 (MQ=255)
                                                                                  ggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGc           <  1:6439868/93‑1 (MQ=255)
                                                                                  ggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGc           <  2:4696642/93‑1 (MQ=255)
                                                                                  ggtgCATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGc           <  1:5137679/93‑1 (MQ=255)
                                                                                      cATGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGaa       >  1:5848150/1‑93 (MQ=255)
                                                                                        tGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAAt     <  2:5814959/93‑1 (MQ=255)
                                                                                        tGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAAt     >  1:5511593/1‑93 (MQ=255)
                                                                                        tGACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAAt     >  2:2895839/1‑93 (MQ=255)
                                                                                         gACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATc    >  1:595028/1‑93 (MQ=255)
                                                                                         gACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAAta    >  2:5277576/1‑92 (MQ=255)
                                                                                         gACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATc    >  1:2021329/1‑93 (MQ=255)
                                                                                         gACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATc    >  2:602154/1‑93 (MQ=255)
                                                                                         gACACCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATc    <  2:3675154/93‑1 (MQ=255)
                                                                                           cGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATCaa  >  1:4149663/1‑93 (MQ=255)
                                                                                            |                                                                                           
AGGCATGAATGGTCGTCATCGTGCCGACTTCTATCCCGAAACTGTCATGCAAGGCTTTGGCCATCGGCGCAAGACAGTTAGTGGTGCATGACGCCACGGAAACAATGGTGTCGTTGCCATCCAGAGTGTCGTCATTGACGTTATAAACGATAGTTTTCATTTCACCGGCAGGGGCGGAAATCAA  >  NC_000913/1488203‑1488386

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: