Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,718,640 A→G L72P (CTG→CCG)  slyA ← SlyA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,718,6400AG86.3% 519.5 / 65.4 197L72P (CTG→CCG) slyASlyA
Reads supporting (aligned to +/- strand):  ref base A (14/13);  new base G (90/80);  total (104/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01

Only 100 of 199 total aligned reads displayed.

ATCAGCGGCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAACTGATG  >  NC_000913/1718550‑1718728
                                                                                          |                                                                                        
  cAGCGGCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTg                                                                                      <  2:6298670/93‑1 (MQ=255)
   aGCGGCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTgg                                                                                     >  1:483994/1‑93 (MQ=255)
    gCGGCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGt                                                                                    >  2:5170478/1‑93 (MQ=255)
      ggCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTcc                                                                                  <  1:1238754/93‑1 (MQ=255)
       gCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCa                                                                                 <  1:6613332/93‑1 (MQ=255)
        ctctGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTGCag                                                                                >  2:855799/1‑93 (MQ=255)
        ctctGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCag                                                                                >  2:4775873/1‑93 (MQ=255)
          ctGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCagag                                                                              <  1:1471071/93‑1 (MQ=255)
            gCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTa                                                                            <  2:3042396/93‑1 (MQ=255)
            gCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTa                                                                            >  2:4434489/1‑93 (MQ=255)
            gCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTa                                                                            <  1:2550507/93‑1 (MQ=255)
             ccTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTAc                                                                           >  1:5999294/1‑93 (MQ=255)
              cTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACg                                                                          >  1:5148149/1‑93 (MQ=255)
               ttttCTGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACgg                                                                         <  2:3447214/93‑1 (MQ=255)
               ttttCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACgg                                                                         >  2:6163/1‑93 (MQ=255)
               ttttCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACgg                                                                         >  1:3808559/1‑93 (MQ=255)
                tttCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGa                                                                        >  1:5702163/1‑93 (MQ=255)
                 ttCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGAc                                                                       <  1:4343384/93‑1 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCa                                                                     >  1:1155092/1‑93 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCa                                                                     <  2:1392027/93‑1 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCa                                                                     >  1:675905/1‑93 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCa                                                                     >  2:5756577/1‑93 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCa                                                                     >  1:1844297/1‑93 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCa                                                                     <  1:6216855/93‑1 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCa                                                                     <  2:5745358/93‑1 (MQ=255)
                   ccGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTGTTCTTCCGGTTGGTCCAGAGTACGGACCa                                                                     >  1:2201101/1‑93 (MQ=255)
                    cGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAg                                                                    >  2:2578372/1‑93 (MQ=255)
                     gTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGt                                                                   <  2:2702061/93‑1 (MQ=255)
                     gTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGt                                                                   >  2:2916385/1‑93 (MQ=255)
                     gTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGt                                                                   <  2:4759718/93‑1 (MQ=255)
                      tCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTg                                                                  >  1:3954443/1‑93 (MQ=255)
                      tCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTg                                                                  >  2:6489702/1‑93 (MQ=255)
                      tCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTg                                                                  >  1:4534740/1‑93 (MQ=255)
                      tCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTg                                                                  <  2:4152954/93‑1 (MQ=255)
                       cAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGa                                                                 <  2:665251/93‑1 (MQ=255)
                       cAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGa                                                                 <  2:5035076/93‑1 (MQ=255)
                       cAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGCTGGTCCAGAGTACGGACCAGTGa                                                                 >  1:1696244/1‑93 (MQ=255)
                       cAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGa                                                                 >  1:3628658/1‑93 (MQ=255)
                         gTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATg                                                               >  2:4289401/1‑93 (MQ=255)
                         gTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATg                                                               <  2:2675900/93‑1 (MQ=255)
                          tttAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAGATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATgg                                                              >  2:6009880/1‑93 (MQ=255)
                          tttAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATgg                                                              >  1:3830618/1‑93 (MQ=255)
                           ttAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGgc                                                             >  2:1694989/1‑93 (MQ=255)
                           ttAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGgc                                                             <  1:437937/93‑1 (MQ=255)
                              aTACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGgctgc                                                          >  1:588406/1‑93 (MQ=255)
                              aTACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGgctgc                                                          <  1:4353231/93‑1 (MQ=255)
                               tACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGgctgct                                                         <  1:4776455/93‑1 (MQ=255)
                                  gTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGa                                                      <  1:1267161/93‑1 (MQ=255)
                                  gTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGa                                                      >  1:2377853/1‑93 (MQ=255)
                                   tttAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGAt                                                     <  1:2110050/93‑1 (MQ=255)
                                   tttAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGAt                                                     <  1:2874043/93‑1 (MQ=255)
                                    ttAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATg                                                    >  2:27876/1‑93 (MQ=255)
                                    ttAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATg                                                    <  1:5623296/93‑1 (MQ=255)
                                    ttAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATg                                                    <  2:3165917/93‑1 (MQ=255)
                                    ttAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATg                                                    <  2:1543825/93‑1 (MQ=255)
                                          cgacgaTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATc                                              >  1:2247793/1‑93 (MQ=255)
                                            acgaTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGc                                            >  1:5223289/1‑93 (MQ=255)
                                            acgaTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGc                                            <  2:2995137/93‑1 (MQ=255)
                                              gaTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCtt                                          <  2:6566053/93‑1 (MQ=255)
                                               aTCGCTGGCACAAGTTTGATGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCttt                                         >  1:6495720/1‑93 (MQ=255)
                                               aTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCttt                                         >  2:1869483/1‑93 (MQ=255)
                                               aTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCttt                                         >  1:907216/1‑93 (MQ=255)
                                               aTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCttt                                         >  2:5433077/1‑93 (MQ=255)
                                               aTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCttt                                         <  1:2599417/93‑1 (MQ=255)
                                               aTCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCttt                                         <  1:5175970/93‑1 (MQ=255)
                                                tCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCtttt                                        <  2:1515370/93‑1 (MQ=255)
                                                   cTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGcc                                     >  1:1979691/1‑93 (MQ=255)
                                                   cTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGcc                                     >  2:1030180/1‑93 (MQ=255)
                                                    tGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCa                                    >  1:4539189/1‑93 (MQ=255)
                                                    tGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCa                                    <  1:582417/93‑1 (MQ=255)
                                                    tGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCa                                    >  2:1692363/1‑93 (MQ=255)
                                                      gCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGt                                  >  2:4488888/1‑93 (MQ=255)
                                                        acaAGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTg                                >  1:6255064/1‑93 (MQ=255)
                                                          aaGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGaa                              <  2:4231225/93‑1 (MQ=255)
                                                          aaGTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGaa                              >  2:4875134/1‑93 (MQ=255)
                                                            gTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAAtt                            >  2:2472690/1‑93 (MQ=255)
                                                            gTTTGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAAtt                            <  1:5812526/93‑1 (MQ=255)
                                                             tttGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAAttt                           <  1:3370766/93‑1 (MQ=255)
                                                             tttGACGCGAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAAttt                           <  1:3746906/93‑1 (MQ=255)
                                                                    cgAAATTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTg                    <  1:4565960/93‑1 (MQ=255)
                                                                     gAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTgg                   >  2:3926843/1‑93 (MQ=255)
                                                                      aaaTTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGt                  >  1:2463942/1‑93 (MQ=255)
                                                                      aaaTTAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGt                  <  1:4265396/93‑1 (MQ=255)
                                                                          tAACCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTgg              >  1:3486597/1‑93 (MQ=255)
                                                                            aCCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAg            >  1:5305323/1‑93 (MQ=255)
                                                                            aCCCTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAg            >  1:506462/1‑93 (MQ=255)
                                                                             cccTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAgg           <  2:1221766/93‑1 (MQ=255)
                                                                             cccTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAgg           >  2:4011344/1‑93 (MQ=255)
                                                                               cTTTTTCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTa         <  1:4136479/93‑1 (MQ=255)
                                                                               cTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTa         <  1:2944046/93‑1 (MQ=255)
                                                                                tttttCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTaa        >  1:1550322/1‑93 (MQ=255)
                                                                                tttttCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTaa        >  2:549188/1‑93 (MQ=255)
                                                                                tttttCTTCCGATTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTaa        <  1:1105642/93‑1 (MQ=255)
                                                                                 ttttCTTCCGGTTGGTCCAGAGTACGGCCCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAAc       <  2:1275100/93‑1 (MQ=255)
                                                                                 ttttCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAAc       <  2:4969975/93‑1 (MQ=255)
                                                                                 ttttCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAAc       >  1:2712318/1‑93 (MQ=255)
                                                                                  tttCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAACt      >  2:559512/1‑93 (MQ=255)
                                                                                  tttCTTCCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAACt      <  2:2248498/93‑1 (MQ=255)
                                                                                     cttcCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAACTGAt   <  2:2141915/93‑1 (MQ=255)
                                                                                      ttcCGGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAACTGATg  >  1:633610/1‑93 (MQ=255)
                                                                                          |                                                                                        
ATCAGCGGCTCTGCCTTTTCCGTCAGTTTAATACGTTTAGCCCGACGATCGCTGGCACAAGTTTGACGCGAAATTAACCCTTTTTCTTCCAGTTGGTCCAGAGTACGGACCAGTGATGGCTGCTCGATGCCAATCGCTTTTGCCAGTTGAATTTGCGACTGGTCTGGAGGTAACTGATG  >  NC_000913/1718550‑1718728

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: