Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,722,918 T→A N247Y (AAC→TAC)  b1647 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,722,9180TA100.0% 802.6 / NA 209N247Y (AAC→TAC) b1647hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (111/98);  total (111/98)

Only 100 of 220 total aligned reads displayed.

TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA  >  NC_000913/1722828‑1723007
                                                                                          |                                                                                         
tttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTaaa                                                                                         >  2:332664/1‑93 (MQ=255)
 ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac                                                                                        <  2:5157394/93‑1 (MQ=255)
 ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac                                                                                        >  1:5777191/1‑93 (MQ=255)
 ttCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAac                                                                                        <  2:6216284/93‑1 (MQ=255)
    tGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccac                                                                                     >  2:1594041/1‑93 (MQ=255)
     gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc                                                                                    <  2:1125976/93‑1 (MQ=255)
     gCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAaccacc                                                                                    <  1:243937/93‑1 (MQ=255)
      cTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCt                                                                                   <  1:3039233/93‑1 (MQ=255)
      cTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCt                                                                                   >  1:4947626/1‑93 (MQ=255)
      cTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGGAATACCCAGGCGTAAACCACCt                                                                                   >  2:5497979/1‑93 (MQ=255)
       ttCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTg                                                                                  <  1:1319862/93‑1 (MQ=255)
       ttCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTg                                                                                  <  2:4878810/93‑1 (MQ=255)
        tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt                                                                                 <  1:4689908/93‑1 (MQ=255)
        tCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGt                                                                                 >  1:5521812/1‑93 (MQ=255)
          gACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCCGGCGTCAACCACCTGTTc                                                                               >  1:1735675/1‑93 (MQ=255)
           aCAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCa                                                                              >  2:1070640/1‑93 (MQ=255)
             aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt                                                                            <  1:3643281/93‑1 (MQ=255)
             aGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAAt                                                                            >  2:3571315/1‑93 (MQ=255)
                tGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGa                                                                         >  1:5024782/1‑93 (MQ=255)
                tGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGa                                                                         <  2:6503066/93‑1 (MQ=255)
                 gCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAAGCGTAAACCACCTGTTCAATCGAg                                                                        >  2:6059760/1‑93 (MQ=255)
                     gTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCGCCTGTTCAATCGAGCCcg                                                                    <  1:1514800/93‑1 (MQ=255)
                     gTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcg                                                                    >  1:4410584/1‑93 (MQ=255)
                      tACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcgc                                                                   <  1:5291322/93‑1 (MQ=255)
                      tACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCcgc                                                                   >  2:5636798/1‑93 (MQ=255)
                        cgcgCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGt                                                                 <  1:6305799/93‑1 (MQ=255)
                         gcgcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGtt                                                                <  1:1623849/93‑1 (MQ=255)
                          cgcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGttt                                                               >  1:6646500/1‑93 (MQ=255)
                           gcTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTa                                                              >  2:1446308/1‑93 (MQ=255)
                            cTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTaa                                                             >  2:4473214/1‑93 (MQ=255)
                             tCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc                                                            <  1:4155759/93‑1 (MQ=255)
                             tCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAc                                                            >  1:3021536/1‑93 (MQ=255)
                              cAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAct                                                           >  1:5177293/1‑93 (MQ=255)
                               aaTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActc                                                          <  2:5815568/93‑1 (MQ=255)
                               aaTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAAccc                                                          <  1:6548142/93‑3 (MQ=255)
                                aTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcc                                                         >  2:4227543/1‑93 (MQ=255)
                                aTTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcc                                                         <  1:2682631/93‑1 (MQ=255)
                                 ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct                                                        <  2:1474785/93‑1 (MQ=255)
                                 ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct                                                        >  2:2953162/1‑93 (MQ=255)
                                 ttttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcct                                                        >  2:416379/1‑93 (MQ=255)
                                  tttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctc                                                       >  2:4194661/1‑93 (MQ=255)
                                  tttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctc                                                       <  1:1165694/93‑1 (MQ=255)
                                  tttACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAActcctc                                                       <  1:2589752/93‑1 (MQ=255)
                                   tgaCCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCctct                                                      >  1:3464623/3‑93 (MQ=255)
                                    tACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTg                                                     >  2:2130512/1‑93 (MQ=255)
                                      ccTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCTGCGTTTAACTCCTCTGcc                                                   >  1:1037416/1‑93 (MQ=255)
                                       cTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGcca                                                  >  1:3151655/1‑93 (MQ=255)
                                         gAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGccacc                                                >  1:4649360/1‑93 (MQ=255)
                                             cGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAg                                            <  1:6390791/93‑1 (MQ=255)
                                              gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc                                           >  1:1281983/1‑93 (MQ=255)
                                              gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc                                           >  2:5405473/1‑93 (MQ=255)
                                              gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc                                           >  2:6111778/1‑93 (MQ=255)
                                              gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc                                           <  2:3968957/93‑1 (MQ=255)
                                              gATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGc                                           >  2:2404263/1‑93 (MQ=255)
                                               aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc                                          <  2:725213/93‑1 (MQ=255)
                                               aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc                                          <  2:2237390/93‑1 (MQ=255)
                                               aTAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGcc                                          <  2:4072521/93‑1 (MQ=255)
                                                tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa                                         >  2:2519637/1‑93 (MQ=255)
                                                tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa                                         <  2:3673229/93‑1 (MQ=255)
                                                tAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGAGTTTAACTCCTCTGCCACCACAGCCa                                         >  1:4237450/1‑93 (MQ=255)
                                                tAATGGGCAGCGGCTGCGAGGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCa                                         <  1:874413/93‑1 (MQ=255)
                                                   ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt                                      <  2:4862385/93‑1 (MQ=255)
                                                   ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt                                      <  2:6270793/93‑1 (MQ=255)
                                                   ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt                                      >  2:4314927/1‑93 (MQ=255)
                                                   ttGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGtt                                      <  2:573516/93‑1 (MQ=255)
                                                    tgtcAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtc                                     <  2:5897632/90‑1 (MQ=255)
                                                     ggCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtca                                    <  2:2292645/93‑1 (MQ=255)
                                                      gCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcat                                   >  1:5505973/1‑93 (MQ=255)
                                                       cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc                                  <  2:1361884/93‑1 (MQ=255)
                                                       cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc                                  <  1:2357426/93‑1 (MQ=255)
                                                       cAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatc                                  <  1:5820589/93‑1 (MQ=255)
                                                        aGCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTtcatca                                 <  1:1964553/93‑1 (MQ=255)
                                                         gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc                                >  2:1712040/1‑93 (MQ=255)
                                                         gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc                                >  2:1321304/1‑93 (MQ=255)
                                                         gCGGCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCAc                                <  1:4016831/93‑1 (MQ=255)
                                                           ggCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGc                              <  2:1795262/93‑1 (MQ=255)
                                                            gCTGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCa                             <  1:492132/93‑1 (MQ=255)
                                                              tGCGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGc                           >  1:1547310/1‑93 (MQ=255)
                                                                cGATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCgg                         >  1:2810057/1‑93 (MQ=255)
                                                                 gATGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGc                        <  1:6070287/93‑1 (MQ=255)
                                                                   tGGTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTg                      <  1:2168529/93‑1 (MQ=255)
                                                                    ggTAAACGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTgg                     >  2:238351/1‑93 (MQ=255)
                                                                       aaaCGTAATACCCAGGCTTAACCCCCCTGTTCAATCGAGCCCGCTTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGaaa                  <  1:2721747/93‑1 (MQ=255)
                                                                        aaCGTAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaat                 >  1:1159594/1‑93 (MQ=255)
                                                                           gTAATACCCAGGCGTAAACCCCCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataat              <  2:4844491/93‑1 (MQ=255)
                                                                           ctAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAaataat              <  2:1965311/92‑1 (MQ=255)
                                                                            tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc             >  2:223232/1‑93 (MQ=255)
                                                                            tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc             >  2:5298411/1‑93 (MQ=255)
                                                                            tAATACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatc             <  2:3902079/93‑1 (MQ=255)
                                                                              aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat           <  1:3931207/93‑1 (MQ=255)
                                                                              aTACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcat           >  1:563787/1‑93 (MQ=255)
                                                                               tACCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAatcatc          >  1:4269028/1‑93 (MQ=255)
                                                                                aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca         <  2:46826/93‑1 (MQ=255)
                                                                                aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca         <  1:1871223/93‑1 (MQ=255)
                                                                                aCCCAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAAtcatca         >  1:181771/1‑93 (MQ=255)
                                                                                 cccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATcatcat        <  1:2311998/93‑1 (MQ=255)
                                                                                 cccAGGCGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATcatcat        >  1:4195222/1‑93 (MQ=255)
                                                                                       cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa  >  1:3801936/1‑93 (MQ=255)
                                                                                       cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa  <  2:6559081/93‑1 (MQ=255)
                                                                                       cGTAAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACa  <  2:2760304/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTTCTGCTTCGACAGCTGCCCGTACGCGCTCAATTTTACCTGAACCGATAATTGGCAGCGGCTGCGATGGTAAACGTAATACCCAGGCGTTAACCACCTGTTCAATCGAGCCCGCGTTTAACTCCTCTGCCACCACAGCCAGTTCATCACGCAGCGGCTGGAAATAATCATCATTAAACA  >  NC_000913/1722828‑1723007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: