Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 106,897 T→A L114Q (CTG→CAG)  lpxC → UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913106,8970TA99.6% 1031.5 / ‑5.4 267L114Q (CTG→CAG) lpxCUDP‑3‑O‑acyl N‑acetylglucosamine deacetylase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (135/130);  minor base G (0/1);  total (135/132)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 274 total aligned reads displayed.

TCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGT  >  NC_000913/106807‑106986
                                                                                          |                                                                                         
tcGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACcagc                                                                                         <  1:5081610/93‑1 (MQ=255)
tcGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACcagc                                                                                         <  2:2007097/93‑1 (MQ=255)
 cgcgGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACcagct                                                                                        >  1:5597003/1‑93 (MQ=255)
  gcgGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACcagctg                                                                                       <  2:2928618/93‑1 (MQ=255)
   cgGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCacctgc                                                                                      >  1:134431/1‑93 (MQ=255)
    gggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAgctgct                                                                                     <  1:842012/93‑1 (MQ=255)
     ggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCtt                                                                                    >  2:115287/1‑93 (MQ=255)
     ggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCtt                                                                                    >  1:1739143/1‑93 (MQ=255)
     ggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCtt                                                                                    >  1:21009/1‑93 (MQ=255)
     ggCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCtt                                                                                    <  2:6120071/93‑1 (MQ=255)
        ttGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGAc                                                                                 <  1:4628167/93‑1 (MQ=255)
          gggCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGc                                                                               <  1:2388994/93‑1 (MQ=255)
           ggCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGcc                                                                              <  1:1784658/93‑1 (MQ=255)
             cATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCgg                                                                            <  2:2847331/93‑1 (MQ=255)
              aTCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGt                                                                           <  2:3072227/93‑1 (MQ=255)
              aTCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGt                                                                           >  2:2455877/1‑93 (MQ=255)
               tCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTa                                                                          >  2:6057298/1‑93 (MQ=255)
               tCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTa                                                                          <  1:2858453/93‑1 (MQ=255)
                cGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTAt                                                                         <  1:3656812/93‑1 (MQ=255)
                 gATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATc                                                                        >  1:5816757/1‑93 (MQ=255)
                   tAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATcga                                                                      <  2:6597030/93‑1 (MQ=255)
                   tAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATcga                                                                      <  2:3239199/93‑1 (MQ=255)
                   tAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATcga                                                                      >  2:6003681/1‑93 (MQ=255)
                   tAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATcga                                                                      <  2:1056962/93‑1 (MQ=255)
                      cATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATcgacga                                                                   <  2:1321538/93‑1 (MQ=255)
                       aTTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAg                                                                  >  1:3260914/1‑93 (MQ=255)
                       aTTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAg                                                                  >  2:4727870/1‑93 (MQ=255)
                        ttGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATCCCAGCTGCTTGACGCCGGTATCGACGAGt                                                                 <  2:444094/93‑1 (MQ=255)
                        ttGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGt                                                                 <  2:1523140/93‑1 (MQ=255)
                        ttGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGt                                                                 >  2:6101873/1‑93 (MQ=255)
                         tGTTATCGAAGTTAACGCGCCGCAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGtt                                                                <  2:5758252/93‑1 (MQ=255)
                          gTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTg                                                               <  2:780859/93‑1 (MQ=255)
                          gTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTg                                                               <  1:1239457/93‑1 (MQ=255)
                           ttATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGa                                                              <  2:3784618/93‑1 (MQ=255)
                           ttATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGa                                                              <  2:3700271/93‑1 (MQ=255)
                           ttATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGa                                                              <  1:2959606/93‑1 (MQ=255)
                            tATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGaa                                                             >  1:112250/1‑93 (MQ=255)
                            tATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGaa                                                             >  1:1488523/1‑93 (MQ=255)
                            tATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGaa                                                             >  2:6479687/1‑93 (MQ=255)
                             aTCGAAGTTAACGCGCCGGAATTCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAAc                                                            <  1:6190453/93‑1 (MQ=255)
                              tCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACAAGCTGCTTGATGCAGGTATCGACGAGTTGAACt                                                           >  1:2183025/1‑93 (MQ=255)
                                gAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTgc                                                         >  1:1070129/1‑93 (MQ=255)
                                gAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTgc                                                         <  2:4977751/93‑1 (MQ=255)
                                 aaGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTgcg                                                        <  1:4078935/93‑1 (MQ=255)
                                 aaGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTgcg                                                        >  2:5342817/1‑93 (MQ=255)
                                    ttAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCa                                                     >  1:39630/1‑93 (MQ=255)
                                    ttAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCa                                                     >  1:3169067/1‑93 (MQ=255)
                                     tAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaa                                                    >  2:1277792/1‑93 (MQ=255)
                                       aCGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaa                                                  <  2:6402299/93‑1 (MQ=255)
                                       aCGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaa                                                  >  1:5541345/1‑93 (MQ=255)
                                         gcgcCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaaaa                                                <  2:3939630/93‑1 (MQ=255)
                                         gcgcCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaaaa                                                <  1:398735/93‑1 (MQ=255)
                                         gcgcCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCaaaaaa                                                >  1:4341700/1‑93 (MQ=255)
                                              ggAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGt                                           <  1:667365/93‑1 (MQ=255)
                                               gAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGGATCGACGAGTTGAACTGCGCCAAAAAATTTGtt                                          >  2:1008466/1‑93 (MQ=255)
                                                aaaTCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTc                                         <  2:2064089/93‑1 (MQ=255)
                                                   tCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCa                                      >  2:4554890/1‑93 (MQ=255)
                                                     ccGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATc                                    <  2:1691735/93‑1 (MQ=255)
                                                     ccGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATc                                    <  2:620508/93‑1 (MQ=255)
                                                     ccGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATc                                    >  2:353972/1‑93 (MQ=255)
                                                     ccGATCATAGACGGCAGCGTCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATc                                    >  1:6446997/1‑93 (MQ=255)
                                                      cGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCa                                   >  2:4813010/1‑93 (MQ=255)
                                                       gATCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCaa                                  >  2:2391330/1‑93 (MQ=255)
                                                        aTCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCaaa                                 <  2:4128978/93‑1 (MQ=255)
                                                        aTCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCaaa                                 >  1:5881073/1‑93 (MQ=255)
                                                         tCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAag                                <  1:1466372/93‑1 (MQ=255)
                                                         tCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGACAACAAATTTGTTCGCATCaaaa                                >  1:4941959/1‑92 (MQ=255)
                                                         tCATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACCGCGCCAAAAAATTTGTTCGCATCAAag                                >  2:5553716/1‑93 (MQ=255)
                                                          cATGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAaga                               >  1:3038459/1‑93 (MQ=255)
                                                           aTGGACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAagag                              >  2:577335/1‑93 (MQ=255)
                                                             ggACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGAc                            <  1:2156711/93‑1 (MQ=255)
                                                             ggACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGAc                            <  2:4076239/93‑1 (MQ=255)
                                                              gACGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACt                           >  2:860343/1‑93 (MQ=255)
                                                                cGGCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGt                         >  1:5723802/1‑93 (MQ=255)
                                                                 ggCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGtt                        >  2:4206845/1‑93 (MQ=255)
                                                                  gCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTc                       <  1:5072977/93‑1 (MQ=255)
                                                                  gCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTc                       <  1:739596/93‑1 (MQ=255)
                                                                  gCAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTc                       <  2:3317343/93‑1 (MQ=255)
                                                                   cAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCg                      <  1:4475232/93‑1 (MQ=255)
                                                                   cAGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCg                      >  1:2268976/1‑93 (MQ=255)
                                                                    aGCGCCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCgt                     >  1:3527371/1‑93 (MQ=255)
                                                                     gcgcCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAGGAGACTGTTCgtg                    <  1:19074/93‑1 (MQ=255)
                                                                     gcgcCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCgtg                    >  1:5285240/1‑93 (MQ=255)
                                                                     gcgcCGCTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCgtg                    >  2:2289681/1‑93 (MQ=255)
                                                                       gccgcTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCgtgtg                  >  1:1410669/1‑92 (MQ=255)
                                                                       gccgcTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTc                  <  1:5453694/93‑1 (MQ=255)
                                                                        ccgcTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCg                 >  1:4539975/1‑93 (MQ=255)
                                                                          gcTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGaa               >  2:5653817/1‑93 (MQ=255)
                                                                          gcTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGaa               <  2:5151778/93‑1 (MQ=255)
                                                                           cTCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAg              >  1:3018365/1‑93 (MQ=255)
                                                                            tCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGa             <  1:4810945/93‑1 (MQ=255)
                                                                            tCCGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGa             >  2:3020885/1‑93 (MQ=255)
                                                                             ccGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGAt            >  2:5293224/1‑93 (MQ=255)
                                                                             ccGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGAt            >  1:3799208/1‑93 (MQ=255)
                                                                              cGTTTGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATg           >  2:3617504/1‑93 (MQ=255)
                                                                                  tGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGa       <  1:278440/93‑1 (MQ=255)
                                                                                  tGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGa       <  2:2180950/93‑1 (MQ=255)
                                                                                  tGTATACCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGa       >  1:899704/1‑93 (MQ=255)
                                                                                       aCCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGt  >  1:3409502/1‑93 (MQ=255)
                                                                                       aCCAGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGt  <  2:4612147/93‑1 (MQ=255)
                                                                                          |                                                                                         
TCGCGGGCTTGGGCATCGATAACATTGTTATCGAAGTTAACGCGCCGGAAATCCCGATCATGGACGGCAGCGCCGCTCCGTTTGTATACCTGCTGCTTGACGCCGGTATCGACGAGTTGAACTGCGCCAAAAAATTTGTTCGCATCAAAGAGACTGTTCGTGTCGAAGATGGCGATAAGT  >  NC_000913/106807‑106986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: