BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	188,475	T→C	Q59R (CAG→CGG)	glnD ←	protein PII

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	188,475	0	T	C	100.0%	887.9 / NA	240	Q59R (CAG→CGG)	glnD	protein PII
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (98/142); total (98/142)

Only 100 of 241 total aligned reads displayed.

ATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATTCA  >  NC_000913/188386‑188564

aTGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGtt                                                                                        <  1:683421/93‑1 (MQ=255)

 tGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTc                                                                                       <  1:2368973/93‑1 (MQ=255)

   ccAGGTCGGCACTCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTg                                                                                     <  1:4703427/93‑1 (MQ=255)

    cAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGc                                                                                    <  2:5861319/93‑1 (MQ=255)

     aGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCa                                                                                   <  1:6043595/93‑1 (MQ=255)

      ggTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCag                                                                                  >  2:6227191/1‑93 (MQ=255)

       gTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCaga                                                                                 <  2:2516683/93‑1 (MQ=255)

        tCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCagag                                                                                >  1:3446195/1‑93 (MQ=255)

         cGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAgaga                                                                               <  2:3092868/93‑1 (MQ=255)

         cGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAgaga                                                                               <  2:6108919/93‑1 (MQ=255)

          ggCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGAt                                                                              <  2:4234104/93‑1 (MQ=255)

           gCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATc                                                                             <  2:5443229/93‑1 (MQ=255)

           gCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATc                                                                             >  2:1146539/1‑93 (MQ=255)

           gCAATCTGGCGGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCCCAATCAACCGTTCTGCAGAGATc                                                                             <  1:4431526/93‑1 (MQ=255)

            cAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATcc                                                                            <  2:761595/93‑1 (MQ=255)

               tCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCAt                                                                         >  2:2037383/1‑93 (MQ=255)

                cTGGCTGAACCCCGCTTCAATCCATAACCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCAtt                                                                        <  2:5290190/93‑1 (MQ=255)

                 tGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTg                                                                       >  1:572607/1‑93 (MQ=255)

                   gCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTc                                                                     >  2:321270/1‑93 (MQ=255)

                     tGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCaa                                                                   <  2:2751051/93‑1 (MQ=255)

                     ggAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCaa                                                                   <  2:6381395/92‑1 (MQ=255)

                      gAATCCGGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCaaa                                                                  <  1:3672014/93‑1 (MQ=255)

                      gAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGCTCCCATTGTCaaa                                                                  >  1:612586/1‑93 (MQ=255)

                      gAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCaaa                                                                  >  2:3951237/1‑93 (MQ=255)

                      gAACCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAACCTCGGTGCGCTCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCaaa                                                                  <  2:4938678/93‑1 (MQ=255)

                       aaTCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAg                                                                 >  1:6525599/1‑93 (MQ=255)

                        aTCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAgg                                                                <  2:48463/93‑1 (MQ=255)

                               ttCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCAcc                                                         <  2:1470162/93‑1 (MQ=255)

                                  aaTCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAg                                                      >  1:6628666/1‑93 (MQ=255)

                                  aaTCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAg                                                      <  2:791447/93‑1 (MQ=255)

                                  aaTCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAg                                                      >  2:3330356/1‑93 (MQ=255)

                                  aaTCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAg                                                      >  1:1836313/1‑93 (MQ=255)

                                    tCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGcc                                                    <  2:3878337/93‑1 (MQ=255)

                                      cATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCaa                                                  >  1:2391986/1‑93 (MQ=255)

                                      cATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCaa                                                  <  2:1575068/93‑1 (MQ=255)

                                       aTAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAAc                                                 <  2:3593647/93‑1 (MQ=255)

                                       aTAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAAc                                                 >  2:1202048/1‑93 (MQ=255)

                                       aTAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAAc                                                 <  1:4970093/93‑1 (MQ=255)

                                         aaTCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGc                                               <  2:5130324/93‑1 (MQ=255)

                                         aaTCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGc                                               >  2:1517525/1‑93 (MQ=255)

                                           tCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTg                                             >  1:5208597/1‑93 (MQ=255)

                                           tCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTg                                             <  1:2013633/93‑1 (MQ=255)

                                           tCGTGGCAGGAGCTGGTCGATAAACTCGGTGCGCGACTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTg                                             <  1:6593572/93‑1 (MQ=255)

                                            cGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTgg                                            <  2:4422829/93‑1 (MQ=255)

                                            cGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTgg                                            <  2:735998/93‑1 (MQ=255)

                                            cGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTgg                                            <  1:4867219/93‑1 (MQ=255)

                                             gTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa                                           >  1:5066001/1‑93 (MQ=255)

                                             gTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa                                           <  1:791606/93‑1 (MQ=255)

                                             gTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGa                                           >  1:1544927/1‑93 (MQ=255)

                                              ttGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGaa                                          <  1:564435/93‑1 (MQ=255)

                                               tGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCACAGGCATCCCCCAGCCAACGCTGGaaa                                         <  1:3793215/93‑1 (MQ=255)

                                               tGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGaaa                                         >  1:1375964/1‑93 (MQ=255)

                                               tGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGaaa                                         <  1:2002534/93‑1 (MQ=255)

                                                gCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAg                                        <  2:2895032/93‑1 (MQ=255)

                                                  aGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTa                                      <  1:2444125/93‑1 (MQ=255)

                                                  aGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTa                                      <  2:5327323/93‑1 (MQ=255)

                                                   ggAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTAt                                     >  2:6117986/1‑93 (MQ=255)

                                                   ggAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTAt                                     <  2:519491/93‑1 (MQ=255)

                                                   ggAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTAt                                     <  2:3963259/93‑1 (MQ=255)

                                                    gAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATc                                    <  2:6428541/93‑1 (MQ=255)

                                                    gAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATc                                    <  2:3170108/93‑1 (MQ=255)

                                                     aGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCg                                   >  2:4309481/1‑93 (MQ=255)

                                                      gCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGa                                  >  2:6235308/1‑93 (MQ=255)

                                                      gCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGa                                  <  1:4652531/93‑1 (MQ=255)

                                                        tGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGata                                >  2:1371057/1‑93 (MQ=255)

                                                        tGGTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGata                                >  2:1788883/1‑93 (MQ=255)

                                                          gTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATg                              <  2:840709/93‑1 (MQ=255)

                                                          gTCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATg                              <  2:2998030/93‑1 (MQ=255)

                                                           tCGATAAGCTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCCCCCAGCCAACGCTGGAAAGTATCGATATgg                             <  1:2323737/93‑1 (MQ=255)

                                                           tCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATgg                             <  1:1676583/93‑1 (MQ=255)

                                                           tCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATgg                             <  1:3000807/93‑1 (MQ=255)

                                                           tCGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATgg                             <  1:1919128/93‑1 (MQ=255)

                                                            cGATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATggg                            <  2:1640324/93‑1 (MQ=255)

                                                             gATAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGc                           <  1:4142150/93‑1 (MQ=255)

                                                              aTAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCt                          >  1:5417665/1‑93 (MQ=255)

                                                              aTAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCt                          <  1:1141625/93‑1 (MQ=255)

                                                              aTAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCt                          <  2:6570412/93‑1 (MQ=255)

                                                              aTAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCt                          >  2:4458255/1‑93 (MQ=255)

                                                               tAAACTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCtt                         <  2:4166243/93‑1 (MQ=255)

                                                                 aaCTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCtttt                       >  2:2294717/1‑93 (MQ=255)

                                                                  aCTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTa                      <  1:4153826/93‑1 (MQ=255)

                                                                  aCTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTa                      <  1:5160195/93‑1 (MQ=255)

                                                                   cTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTAt                     >  1:2747609/1‑93 (MQ=255)

                                                                   cTCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTAt                     >  1:1437981/1‑93 (MQ=255)

                                                                    tCGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATc                    >  2:605517/1‑93 (MQ=255)

                                                                     cGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATcc                   <  1:3138947/93‑1 (MQ=255)

                                                                     cGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATcc                   <  2:3797467/93‑1 (MQ=255)

                                                                     cGGTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTAAcc                   <  1:974409/93‑1 (MQ=255)

                                                                       gTGCGCGCCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCa                 >  1:6177565/1‑93 (MQ=255)

                                                                         gcgcgcCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCAcc               >  1:3945082/1‑93 (MQ=255)

                                                                          cgcgcCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCg              <  1:2883225/93‑1 (MQ=255)

                                                                          cgcgcCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCg              >  1:4451616/1‑93 (MQ=255)

                                                                            cgcCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGAc            <  2:1717938/93‑1 (MQ=255)

                                                                             gcCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACg           >  1:5512451/1‑93 (MQ=255)

                                                                             gcCTCAATCAACCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACg           >  1:1787547/1‑93 (MQ=255)

                                                                              ccTCAATCACCCGTTCAGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACgg          <  1:3495404/93‑1 (MQ=255)

                                                                                tcaatcaaCCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGtt        >  1:4398735/1‑93 (MQ=255)

                                                                                    tcaaCCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAAtt    <  1:2535517/93‑1 (MQ=255)

                                                                                     caaCCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATtc   <  1:3197152/93‑1 (MQ=255)

                                                                                      aaCCGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATtca  <  2:5799477/93‑1 (MQ=255)

ATGCCAGGTCGGCAATCTGGCTGAATCCCGCTTCAATCCATAATCGTTGCAGGAGCTGGTCGATAAACTCGGTGCGCGCCTCAATCAACTGTTCTGCAGAGATCCCATTGTCAAAGGCATCACCCAGCCAACGCTGGAAAGTATCGATATGGGCTTTTATCCCACCGACGGTTAATTCA  >  NC_000913/188386‑188564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`