Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,026,185 C→T intergenic (‑131/+25) b1956 ← / ← b1957 hypothetical protein/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,026,1850CT84.8% 546.4 / 70.1 197intergenic (‑131/+25)b1956/b1957hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (17/13);  new base T (98/69);  total (115/82)
Fisher's exact test for biased strand distribution p-value = 8.43e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.62e-01

Only 100 of 198 total aligned reads displayed.

GTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCTTCC  >  NC_000913/2026093‑2026273
                                                                                            |                                                                                        
  aCCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCg                                                                                        <  2:165203/93‑1 (MQ=255)
  aCCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCg                                                                                        <  1:2665262/93‑1 (MQ=255)
    cGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGc                                                                                      <  2:2653467/93‑1 (MQ=255)
    cGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGACGGATGTGATTCGGc                                                                                      >  2:1614022/1‑93 (MQ=255)
     gCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGcc                                                                                     >  2:139890/1‑93 (MQ=255)
     gCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGcc                                                                                     >  2:3743109/1‑93 (MQ=255)
       aaaaCAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTg                                                                                   >  1:2295156/1‑93 (MQ=255)
          aCAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATg                                                                                <  1:5740452/93‑1 (MQ=255)
           cAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGt                                                                               >  2:1154807/1‑93 (MQ=255)
            aGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGtt                                                                              <  1:2952502/93‑1 (MQ=255)
            aGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGtt                                                                              >  1:4876474/1‑93 (MQ=255)
            aGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGtt                                                                              <  2:1361462/93‑1 (MQ=255)
            aGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGtt                                                                              >  2:5354117/1‑93 (MQ=255)
             gCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTa                                                                             >  2:5464975/1‑93 (MQ=255)
             gCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTa                                                                             >  1:544136/1‑93 (MQ=255)
                  aaTTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGAt                                                                        >  1:5811907/1‑93 (MQ=255)
                    ttttATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATAc                                                                      <  1:5415474/93‑1 (MQ=255)
                    ttttATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATAc                                                                      >  2:5640252/1‑93 (MQ=255)
                     tttATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATAcc                                                                     >  2:111265/1‑93 (MQ=255)
                      ttATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATAccc                                                                    >  1:753425/1‑93 (MQ=255)
                      ttATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATAccc                                                                    <  2:2717335/93‑1 (MQ=255)
                       tataATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCt                                                                   >  1:1350405/1‑93 (MQ=255)
                       tataATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCt                                                                   <  2:6625622/93‑1 (MQ=255)
                         aaaTGGTGGCATGATAAGACGCAACTATCACTCATTGCAGCCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCttt                                                                 <  1:4678570/92‑1 (MQ=255)
                          aaTGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTc                                                                >  2:4730961/1‑93 (MQ=255)
                          aaTGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTc                                                                >  2:3629541/1‑93 (MQ=255)
                           aTGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTca                                                               >  1:325941/1‑93 (MQ=255)
                            tggtggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTcac                                                              >  2:1239771/1‑93 (MQ=255)
                            tggtggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTcac                                                              >  1:6162515/1‑93 (MQ=255)
                              gtggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCacac                                                            >  1:273138/1‑93 (MQ=255)
                               tggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACAct                                                           <  2:1062954/93‑1 (MQ=255)
                                ggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACActt                                                          <  1:2016098/93‑1 (MQ=255)
                                ggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACActt                                                          >  2:3085477/1‑93 (MQ=255)
                                ggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACActt                                                          >  2:127080/1‑93 (MQ=255)
                                ggCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACActt                                                          <  1:4065019/93‑1 (MQ=255)
                                 gCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACActtc                                                         >  2:4347631/1‑93 (MQ=255)
                                  cATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACActtct                                                        >  2:3931273/1‑93 (MQ=255)
                                    tGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACttcttc                                                      >  2:4871457/1‑93 (MQ=255)
                                    tGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACttcttc                                                      >  1:2545121/1‑93 (MQ=255)
                                    tGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACttcttc                                                      >  2:6089996/1‑93 (MQ=255)
                                    tGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACttcttc                                                      <  1:2991717/93‑1 (MQ=255)
                                     gATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTcc                                                     >  2:5599808/1‑93 (MQ=255)
                                     gATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTcc                                                     >  1:5279078/1‑93 (MQ=255)
                                     gATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGAGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTcc                                                     <  1:5454902/93‑1 (MQ=255)
                                     gATAAGACGCGACTATCATTCATTGCAGGCATTAGCACAACAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTcc                                                     >  1:1026130/1‑93 (MQ=255)
                                      aTAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCg                                                    >  1:4145097/1‑93 (MQ=255)
                                      aTAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCg                                                    <  1:2028253/93‑1 (MQ=255)
                                       tAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGc                                                   >  2:2492753/1‑93 (MQ=255)
                                       tAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGc                                                   >  2:4115908/1‑93 (MQ=255)
                                       tAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGc                                                   >  2:145783/1‑93 (MQ=255)
                                         aGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAg                                                 >  1:417903/1‑93 (MQ=255)
                                          gACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGa                                                >  1:1962610/1‑93 (MQ=255)
                                               gACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGAc                                           >  1:2504431/1‑93 (MQ=255)
                                                aCTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGAct                                          <  1:1233428/93‑1 (MQ=255)
                                                aCTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGAct                                          >  2:2000204/1‑93 (MQ=255)
                                                 cTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTAATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActc                                         <  2:4663631/93‑1 (MQ=255)
                                                  tATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcc                                        >  2:3302065/1‑93 (MQ=255)
                                                  tATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcc                                        <  2:2854304/93‑1 (MQ=255)
                                                   aTCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActccc                                       <  1:3305591/93‑1 (MQ=255)
                                                    tcattcatTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccc                                      >  2:3963722/1‑93 (MQ=255)
                                                    tcattcatTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccc                                      <  2:4196550/93‑1 (MQ=255)
                                                    tcattcatTGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccc                                      <  2:6494774/93‑1 (MQ=255)
                                                     cattcattGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccct                                     >  2:2142050/1‑93 (MQ=255)
                                                      attcattGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccctc                                    >  2:5764390/1‑93 (MQ=255)
                                                       ttcattGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccctcc                                   >  2:6054344/1‑93 (MQ=255)
                                                        tcattGCAGGTATTATCACAGCAGGCCGGATGCTATTCGGCCTGATGTTAATGATACCCATTCACACTTCTTCGGCAGGACGActcccctccc                                  >  1:5586429/1‑93 (MQ=255)
                                                        tcattGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGActcccctccc                                  >  2:2416869/1‑93 (MQ=255)
                                                         cattGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTTACACTTCTTCCGCAGAACGACtcccctcccc                                 >  1:2861775/1‑93 (MQ=255)
                                                          attGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTccccc                                >  2:2691385/1‑93 (MQ=255)
                                                           ttGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATCCCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCg                               <  1:3505508/93‑1 (MQ=255)
                                                           ttGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCg                               <  1:4399470/93‑1 (MQ=255)
                                                           ttGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCg                               <  2:4515551/93‑1 (MQ=255)
                                                            tGCAGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCgg                              >  1:3678747/1‑93 (MQ=255)
                                                               aGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAAc                           <  1:5009740/93‑1 (MQ=255)
                                                               aGGCATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAAc                           >  2:5943035/1‑93 (MQ=255)
                                                                  cATTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAg                        <  2:5535437/93‑1 (MQ=255)
                                                                   aTTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGc                       >  2:2261209/1‑93 (MQ=255)
                                                                   aTTAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGc                       >  1:1628109/1‑93 (MQ=255)
                                                                     tAGCACACCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTc                     <  2:3449649/93‑1 (MQ=255)
                                                                        cacaCCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGt                  <  1:6616543/93‑1 (MQ=255)
                                                                         acacCAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCGCACTTCTTCCGCAGAACCACTCCCCTCCCCCGGAACAAGCTCGGtt                 <  1:3927102/93‑1 (MQ=255)
                                                                             cAGTCCGGATGTGATCCGGCCTGATGCTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCCGAACAAGCTCGGTTTcgt             >  1:657858/1‑91 (MQ=255)
                                                                             cAGGCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCAt             <  2:5879245/93‑1 (MQ=255)
                                                                               ggCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGa           >  2:3239317/1‑93 (MQ=255)
                                                                               ggCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGa           >  2:6269176/1‑93 (MQ=255)
                                                                               ggCCGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGa           >  1:4710663/1‑93 (MQ=255)
                                                                               ggCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGa           >  1:3353791/1‑93 (MQ=255)
                                                                                 ccGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGaaa         <  1:1010368/93‑1 (MQ=255)
                                                                                  cGGATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGaaaa        >  2:3696267/1‑93 (MQ=255)
                                                                                   ggATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAg       <  2:3587520/93‑1 (MQ=255)
                                                                                    gATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGc      >  1:6427715/1‑93 (MQ=255)
                                                                                    gATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGc      <  1:1494012/93‑1 (MQ=255)
                                                                                    gATGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGc      >  1:3088506/1‑93 (MQ=255)
                                                                                    gATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGc      >  1:5961320/1‑93 (MQ=255)
                                                                                     aTGTGATTCGGCCTGATGTTAATGATGCCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCt     <  2:4992510/93‑1 (MQ=255)
                                                                                     aTGTGATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCt     >  1:4339567/1‑93 (MQ=255)
                                                                                      tgtgATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCtt    >  1:875541/1‑93 (MQ=255)
                                                                                       gtgATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCTTc   >  1:4791623/1‑93 (MQ=255)
                                                                                        tgATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCTTcc  >  1:4990694/1‑93 (MQ=255)
                                                                                        tgATTCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCTTcc  <  1:5354117/93‑1 (MQ=255)
                                                                                            |                                                                                        
GTACCGCAAAACAGCGATAATTTTATAATGGTGGCATGATAAGACGCGACTATCATTCATTGCAGGCATTAGCACACCAGGCCGGATGTGATCCGGCCTGATGTTAATGATACCCTTTCACACTTCTTCCGCAGAACGACTCCCCTCCCCCGGAACAAGCTCGGTTTCATGAAAAGCTTCC  >  NC_000913/2026093‑2026273

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: