Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,610,050 T→C L44P (CTG→CCG)  b2491 → HyfR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,610,0500TC83.3% 499.6 / 98.8 217L44P (CTG→CCG) b2491HyfR
Reads supporting (aligned to +/- strand):  ref base T (24/12);  new base C (80/99);  total (105/112)
Fisher's exact test for biased strand distribution p-value = 1.80e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.33e-02

Only 100 of 250 total aligned reads displayed.

GAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGA  >  NC_000913/2609960‑2610142
                                                                                          |                                                                                            
gAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCcgccgc                                                                                            <  1:5136481/93‑1 (MQ=255)
gAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCcgccgc                                                                                            >  2:1657425/1‑93 (MQ=255)
gAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTgc                                                                                            >  2:4644645/1‑93 (MQ=255)
gAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTgc                                                                                            <  1:2519289/93‑1 (MQ=255)
gAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTgc                                                                                            >  1:298107/1‑93 (MQ=255)
 aaTAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCgccgcc                                                                                           >  1:2580770/1‑93 (MQ=255)
  aTAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCccgccgccg                                                                                          <  1:6428551/93‑1 (MQ=255)
   tAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCcgccgccgc                                                                                         >  1:1373864/1‑93 (MQ=255)
       aaTTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCgccgccgccgcc                                                                                     >  2:2126430/1‑93 (MQ=255)
        aTTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGccgccgccgccg                                                                                    <  1:6152081/93‑1 (MQ=255)
          tGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGtt                                                                                  <  1:4900824/93‑1 (MQ=255)
            aaGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCa                                                                                <  2:3005625/93‑1 (MQ=255)
            aaGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCa                                                                                >  1:1526579/1‑93 (MQ=255)
            aaGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCa                                                                                <  2:1152286/93‑1 (MQ=255)
              gCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGc                                                                              <  2:5898092/93‑1 (MQ=255)
               cGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGcc                                                                             <  2:3038733/93‑1 (MQ=255)
               cGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGcc                                                                             >  2:6327/1‑93 (MQ=255)
               cGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGcc                                                                             <  1:2312398/93‑1 (MQ=255)
                ggTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGccc                                                                            >  1:5262415/1‑93 (MQ=255)
                ggTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCAGCAGCCGCCGCCGTTCAGccc                                                                            >  2:6187286/1‑93 (MQ=255)
                 gTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCg                                                                           <  1:1746210/93‑1 (MQ=255)
                  tAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTCTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCgg                                                                          <  2:4661729/93‑1 (MQ=255)
                   aaaCGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAATGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGt                                                                         <  1:3430036/93‑1 (MQ=255)
                   aaaCGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGt                                                                         <  2:5261437/93‑1 (MQ=255)
                       ggAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACaa                                                                     >  1:2552395/1‑93 (MQ=255)
                        gAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAAc                                                                    >  2:2664093/1‑93 (MQ=255)
                         aaTGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACt                                                                   >  2:5828674/1‑93 (MQ=255)
                         aaTGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACt                                                                   <  1:5709889/93‑1 (MQ=255)
                         aaTGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACt                                                                   <  1:906069/93‑1 (MQ=255)
                          aTGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACtt                                                                  >  2:151733/1‑93 (MQ=255)
                          aTGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACtt                                                                  >  1:4781700/1‑93 (MQ=255)
                            gCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTAt                                                                >  2:2760050/1‑93 (MQ=255)
                             cTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTAtt                                                               >  2:6548760/1‑93 (MQ=255)
                             cTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTAtt                                                               <  2:735614/93‑1 (MQ=255)
                             cTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTAtt                                                               <  1:1154624/93‑1 (MQ=255)
                                gcgGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGaa                                                            >  1:1214368/1‑93 (MQ=255)
                                 cgGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAAc                                                           <  2:4976817/93‑1 (MQ=255)
                                 cgGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAAc                                                           <  1:1917637/93‑1 (MQ=255)
                                  ggAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACt                                                          <  2:4705562/93‑1 (MQ=255)
                                  ggAGCGGTTAGAACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCTCCGCTGCCGTTCAGCCCGGTACAAATTATTGAACt                                                          >  1:3363528/1‑93 (MQ=255)
                                   gAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTg                                                         <  1:5570587/93‑1 (MQ=255)
                                   gAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTg                                                         >  2:4005100/1‑93 (MQ=255)
                                    aGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGc                                                        <  2:2437173/93‑1 (MQ=255)
                                    aGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGc                                                        <  2:5652880/93‑1 (MQ=255)
                                     gCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCa                                                       <  2:4372675/93‑1 (MQ=255)
                                      cGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCAt                                                      >  1:3708665/1‑93 (MQ=255)
                                       ggTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATg                                                     <  1:176532/93‑1 (MQ=255)
                                         ttAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGtt                                                   >  2:3332251/1‑93 (MQ=255)
                                           tgCACAGAAACACGGCATGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTtct                                                 <  2:813089/92‑1 (MQ=255)
                                           aGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTtct                                                 >  2:4090276/1‑93 (MQ=255)
                                           aGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTtct                                                 <  1:4096681/93‑1 (MQ=255)
                                           aGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTtct                                                 >  2:1234379/1‑93 (MQ=255)
                                            gCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTtctc                                                <  1:3824693/93‑1 (MQ=255)
                                              acaGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCaa                                              <  2:2590358/93‑1 (MQ=255)
                                               caGAAACACGGCAAGGCGTCTTTAGTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCaaa                                             >  1:6406485/1‑93 (MQ=255)
                                                aGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCaaaa                                            <  1:6611088/93‑1 (MQ=255)
                                                 gAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAg                                           >  1:2403366/1‑93 (MQ=255)
                                                 gAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAg                                           >  1:5968277/1‑93 (MQ=255)
                                                 gAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAg                                           >  2:292970/1‑93 (MQ=255)
                                                      acGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACt                                      >  2:4833885/1‑93 (MQ=255)
                                                       cGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACtt                                     <  2:3939777/93‑1 (MQ=255)
                                                       cGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACtt                                     <  2:375620/93‑1 (MQ=255)
                                                          gaaGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTa                                  <  1:4511113/92‑1 (MQ=255)
                                                          cAAGGCGTCTTTATTACGCGCCTTCAGCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTa                                  <  1:4971825/93‑1 (MQ=255)
                                                            aGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTAtt                                >  2:5285085/1‑93 (MQ=255)
                                                            aGGCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTAtt                                <  2:5964933/93‑1 (MQ=255)
                                                             ggCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTa                               <  2:5423254/93‑1 (MQ=255)
                                                              gCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTAc                              <  1:5462387/93‑1 (MQ=255)
                                                              gCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTAc                              <  1:5362933/93‑1 (MQ=255)
                                                              gCGTCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTAc                              <  2:18745/93‑1 (MQ=255)
                                                                 tCTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGc                           <  1:4197287/93‑1 (MQ=255)
                                                                  cTTTATTACGCTCCTTCATCCCGCCGCCGCTGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCt                          <  2:1731895/93‑1 (MQ=255)
                                                                  cTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCt                          <  1:3912911/93‑1 (MQ=255)
                                                                  cTTTATTACGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCt                          >  2:6359519/1‑93 (MQ=255)
                                                                   tttATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTa                         >  2:2707422/1‑93 (MQ=255)
                                                                    ttattaCGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAGCTTCTATTACCGCTAc                        <  2:5794370/93‑1 (MQ=255)
                                                                    ttattaCGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTAc                        >  2:1010935/1‑93 (MQ=255)
                                                                     tattaCGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTAcc                       <  1:3211613/93‑1 (MQ=255)
                                                                     tattaCGCCCCTTCATCCCGACGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTAcc                       <  2:2115144/93‑1 (MQ=255)
                                                                       ttaCGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCat                     <  2:3944721/93‑1 (MQ=255)
                                                                         aCGCGCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCatga                   <  2:789302/93‑1 (MQ=255)
                                                                          cgcgCCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCatgat                  <  1:3503399/93‑1 (MQ=255)
                                                                           gcgcCTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCatgatg                 >  1:2651827/1‑93 (MQ=255)
                                                                              ccTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTTAAAAGCAACTTCTATTACCGCTACCatgatgatg              >  2:2183093/1‑93 (MQ=255)
                                                                               cTTCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATgg             >  1:1390067/1‑93 (MQ=255)
                                                                                ttCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGc            >  2:5013460/1‑93 (MQ=255)
                                                                                ttCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGc            >  2:6271483/1‑93 (MQ=255)
                                                                                ttCATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGc            <  1:6630737/93‑1 (MQ=255)
                                                                                 tCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCa           >  2:1984475/1‑93 (MQ=255)
                                                                                  cATCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAg          >  1:1487452/1‑93 (MQ=255)
                                                                                    tCCCGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCg        >  1:6379337/1‑93 (MQ=255)
                                                                                     cccGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGa       >  2:4561525/1‑93 (MQ=255)
                                                                                     cccGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGa       >  2:3619743/1‑93 (MQ=255)
                                                                                     cccGCCGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGa       <  1:5662392/93‑1 (MQ=255)
                                                                                      ccgccgccgccgCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGAt      <  1:3541813/93‑1 (MQ=255)
                                                                                      ccgccgccgccgCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGAt      <  1:4907052/93‑1 (MQ=255)
                                                                                      ccgccgccgccgCCGTTCAGCCCGGTACAACTTATTGAACTGCATGGTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGAt      >  1:6282286/1‑93 (MQ=255)
                                                                                       cgccgccgccgcCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGAtg     <  1:2812245/93‑1 (MQ=255)
                                                                                       cGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGAtg     >  1:4015198/1‑93 (MQ=255)
                                                                                         cTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGAtgtg   >  1:925198/1‑93 (MQ=255)
                                                                                          |                                                                                            
GAATAACAATTGAAGCGGTAAACGGAATGCTCGCGGAGCGGTTAGCACAGAAACACGGCAAGGCGTCTTTATTACGCGCCTTCATCCCGCTGCCGCCGCCGTTCAGCCCGGTACAACTTATTGAACTGCATGTTCTCAAAAGCAACTTCTATTACCGCTACCATGATGATGGCAGCGATGTGA  >  NC_000913/2609960‑2610142

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: