Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,787,653 G→A A216A (GCG→GCA b2659 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,787,6530GA81.8% 599.7 / 111.6 247A216A (GCG→GCAb2659hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (26/19);  new base A (101/101);  total (127/120)
Fisher's exact test for biased strand distribution p-value = 4.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.89e-02

Only 100 of 275 total aligned reads displayed.

AAATTCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATCGACCAGTT  >  NC_000913/2787563‑2787745
                                                                                          |                                                                                            
aaaTTCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTgccgcacc                                                                                            <  2:4197219/93‑1 (MQ=255)
 aaTTCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTgccgcgccg                                                                                           <  2:3606629/93‑1 (MQ=255)
   ttCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCaccgcc                                                                                         >  2:2958211/1‑93 (MQ=255)
     cGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGa                                                                                       <  1:3211033/93‑1 (MQ=255)
       ctgctgctgCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGt                                                                                     <  1:3007694/93‑1 (MQ=255)
        tgctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTa                                                                                    <  1:24655/93‑1 (MQ=255)
        tgctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTa                                                                                    <  1:101904/93‑1 (MQ=255)
        tgctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTa                                                                                    <  1:5887133/93‑1 (MQ=255)
        tgctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTa                                                                                    >  2:6473793/1‑93 (MQ=255)
        tgctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGACACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTa                                                                                    >  1:951022/1‑93 (MQ=255)
         gctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTaa                                                                                   >  1:4264428/1‑93 (MQ=255)
          ctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTaaa                                                                                  >  2:2681467/1‑93 (MQ=255)
          ctgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTaaa                                                                                  >  1:3819131/1‑93 (MQ=255)
           tgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTaaaa                                                                                 >  2:4406113/1‑93 (MQ=255)
           tgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTaaaa                                                                                 <  1:4969040/93‑1 (MQ=255)
           tgctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTaaaa                                                                                 >  2:4515552/1‑93 (MQ=255)
            gctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTaaaaa                                                                                <  1:2703986/93‑1 (MQ=255)
             ctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAAc                                                                               >  1:4348363/1‑93 (MQ=255)
             ctgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAAc                                                                               <  2:5775457/93‑1 (MQ=255)
              tgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACg                                                                              <  1:5269821/93‑1 (MQ=255)
              tgcATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACg                                                                              >  2:1957289/1‑93 (MQ=255)
                cATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTc                                                                            >  1:2274786/1‑93 (MQ=255)
                cATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTc                                                                            <  1:6085343/93‑1 (MQ=255)
                 aTCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCa                                                                           <  2:4324589/93‑1 (MQ=255)
                 aTCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCa                                                                           >  1:2567965/1‑93 (MQ=255)
                 aTCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCa                                                                           >  2:5352807/1‑93 (MQ=255)
                 aTCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCa                                                                           <  2:3281522/93‑1 (MQ=255)
                  tctcGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAg                                                                          <  1:735361/93‑1 (MQ=255)
                  tctcGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAg                                                                          >  2:1602471/1‑93 (MQ=255)
                  tctcGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAg                                                                          >  2:3169280/1‑93 (MQ=255)
                   ctcGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGc                                                                         >  2:4644761/1‑93 (MQ=255)
                    tcGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCa                                                                        >  2:5732329/1‑93 (MQ=255)
                      gATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCaaa                                                                      <  1:4482190/93‑1 (MQ=255)
                      gATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCaaa                                                                      >  1:260332/1‑93 (MQ=255)
                         gACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGAt                                                                   >  1:3629939/1‑93 (MQ=255)
                          aCTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATg                                                                  >  1:5510124/1‑93 (MQ=255)
                          aCTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATg                                                                  >  2:6015502/1‑93 (MQ=255)
                           cTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGt                                                                 <  2:3356405/93‑1 (MQ=255)
                            tGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGtt                                                                <  2:6162392/93‑1 (MQ=255)
                             gggAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGttt                                                               <  1:5107557/93‑1 (MQ=255)
                             gggAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGttt                                                               >  2:6371601/1‑93 (MQ=255)
                             gggAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGttt                                                               >  1:1135308/1‑93 (MQ=255)
                              ggAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGtttt                                                              <  2:1732525/93‑1 (MQ=255)
                              ggAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGtttt                                                              <  1:4647083/93‑1 (MQ=255)
                                aaCATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTc                                                            <  2:4721658/93‑1 (MQ=255)
                                 aCATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCa                                                           <  1:4518793/93‑1 (MQ=255)
                                  cATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCAt                                                          >  2:2218942/1‑93 (MQ=255)
                                    tctcGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATcc                                                        <  2:2426248/93‑1 (MQ=255)
                                      tcGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCgg                                                      <  2:2630580/93‑1 (MQ=255)
                                       cGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgt                                                     >  2:570704/1‑93 (MQ=255)
                                       cGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgt                                                     <  2:1292865/93‑1 (MQ=255)
                                       cGACAACTATTCCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgt                                                     <  1:5745875/93‑1 (MQ=255)
                                        gACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgtg                                                    <  1:6390034/93‑1 (MQ=255)
                                        gACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgtg                                                    <  2:3787503/93‑1 (MQ=255)
                                         aCAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgtgt                                                   >  2:5053186/1‑93 (MQ=255)
                                         aCAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGgtgt                                                   >  2:4269101/1‑93 (MQ=255)
                                            aCTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCg                                                <  2:3103443/93‑1 (MQ=255)
                                              tATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGAc                                              <  2:5371655/93‑1 (MQ=255)
                                                tttCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGt                                            <  1:1665638/93‑1 (MQ=255)
                                                  tCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCg                                          <  1:5846455/93‑1 (MQ=255)
                                                   ccGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGa                                         >  1:2832134/1‑93 (MQ=255)
                                                     gCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATc                                       <  2:4161044/93‑1 (MQ=255)
                                                      ccACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCa                                      >  2:2525099/1‑93 (MQ=255)
                                                       cACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCaa                                     >  1:3366728/1‑93 (MQ=255)
                                                       cACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCaa                                     >  2:3916215/1‑93 (MQ=255)
                                                        aCCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAAc                                    <  1:4011995/93‑1 (MQ=255)
                                                         cccGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACa                                   >  2:2707238/1‑93 (MQ=255)
                                                          ccGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAg                                  <  2:1417487/93‑1 (MQ=255)
                                                          ccGCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAg                                  <  2:2347369/93‑1 (MQ=255)
                                                            gCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAggg                                >  1:714339/1‑93 (MQ=255)
                                                            gCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAggg                                >  2:4965949/1‑93 (MQ=255)
                                                            gCTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAggg                                >  1:522933/1‑93 (MQ=255)
                                                             cTGGCGCGTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGt                               <  2:4006525/93‑1 (MQ=255)
                                                               ggCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCg                             >  2:56250/1‑93 (MQ=255)
                                                               ggCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCg                             >  2:6272949/1‑93 (MQ=255)
                                                                  gcgTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGccc                          <  1:1409555/93‑1 (MQ=255)
                                                                  gcgTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGccc                          >  2:3037755/1‑93 (MQ=255)
                                                                   cgTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCg                         <  1:6279311/93‑1 (MQ=255)
                                                                   cgTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGGGTTCGACGTCGATAAACAGGGTCGCCCg                         >  2:5088471/1‑93 (MQ=255)
                                                                    gTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCgg                        >  1:4416995/1‑93 (MQ=255)
                                                                    gTCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCgg                        >  1:5446316/1‑93 (MQ=255)
                                                                     tCGCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGt                       >  2:4662383/1‑93 (MQ=255)
                                                                       gCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGa                     <  2:6358528/93‑1 (MQ=255)
                                                                       gCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGa                     <  1:3879589/93‑1 (MQ=255)
                                                                       gCCCGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGa                     >  2:5565830/1‑93 (MQ=255)
                                                                        cccGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGAt                    <  1:2045902/93‑1 (MQ=255)
                                                                        cccGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGAt                    <  1:809466/93‑1 (MQ=255)
                                                                         ccGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATg                   >  1:3154695/1‑93 (MQ=255)
                                                                         ccGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATg                   <  1:5655226/93‑1 (MQ=255)
                                                                          cGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCCTCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATgc                  <  1:3198506/93‑1 (MQ=255)
                                                                          cGATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATgc                  >  1:4546997/1‑93 (MQ=255)
                                                                           gATGCGCTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATgcg                 >  2:2088801/1‑93 (MQ=255)
                                                                            aTGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATgcgc                >  1:5055491/1‑93 (MQ=255)
                                                                             tGCGCTTTTCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCt               >  1:6478108/1‑93 (MQ=255)
                                                                              gcgcTTTGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCta              <  2:702345/93‑1 (MQ=255)
                                                                                gcTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCtata            >  1:1933724/1‑93 (MQ=255)
                                                                                  tttGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATc          <  1:2890808/93‑1 (MQ=255)
                                                                                  tttGCCGCACCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATc          <  1:2959227/93‑1 (MQ=255)
                                                                                     tccgcaccgcCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATCGAc       <  1:557801/92‑1 (MQ=255)
                                                                                       cgcaccgcCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATCGACCa     >  2:365635/1‑93 (MQ=255)
                                                                                          |                                                                                            
AAATTCGCTGCTGCTGCATCTCGATGACTGGGAACATCTCGACAACTATTTCCGCCACCCGCTGGCGCGTCGCCCGATGCGCTTTGCCGCGCCGCCGAGTAAAAACGTCAGCAAAGATGTTTTTCATCCGGTGTTCGACGTCGATCAACAGGGTCGCCCGGTGATGCGCTATATCGACCAGTT  >  NC_000913/2787563‑2787745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: