Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,072,672 T→C Q13R (CAG→CGG)  yggC ← putative kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,072,6720TC84.6% 612.1 / 100.8 240Q13R (CAG→CGG) yggCputative kinase
Reads supporting (aligned to +/- strand):  ref base T (19/18);  new base C (114/89);  total (133/107)
Fisher's exact test for biased strand distribution p-value = 5.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.43e-01

Only 100 of 243 total aligned reads displayed.

GCCGCTGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGTTTTG  >  NC_000913/3072583‑3072760
                                                                                         |                                                                                        
 ccgcTGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTAt                                                                                      >  2:3101188/1‑93 (MQ=255)
   gcTGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCt                                                                                    <  2:3817861/93‑1 (MQ=255)
   gcTGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCt                                                                                    >  1:2060599/1‑93 (MQ=255)
     tGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTc                                                                                  <  1:844848/93‑1 (MQ=255)
     tGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTc                                                                                  <  2:4174016/93‑1 (MQ=255)
      gCGGATTTACCGTCTGTAAGGACGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCa                                                                                 <  1:5968241/93‑1 (MQ=255)
       cGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAg                                                                                <  2:4016441/93‑1 (MQ=255)
        ggATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGc                                                                               <  1:800734/93‑1 (MQ=255)
        ggATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGc                                                                               <  1:5731963/93‑1 (MQ=255)
         gATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGcc                                                                              >  2:490480/1‑93 (MQ=255)
         gATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGcc                                                                              >  1:4337950/1‑93 (MQ=255)
           tttACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCa                                                                            <  1:3035871/93‑1 (MQ=255)
           tttACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCa                                                                            >  2:5349735/1‑93 (MQ=255)
           tttACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCa                                                                            >  1:4753370/1‑93 (MQ=255)
           tttACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCa                                                                            <  1:5800309/93‑1 (MQ=255)
             tatcGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCAtt                                                                          <  2:2634556/90‑1 (MQ=255)
              aCCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTc                                                                         <  2:2687387/93‑1 (MQ=255)
              aCCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTc                                                                         >  1:1621648/1‑93 (MQ=255)
                cGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCAc                                                                       >  2:5306727/1‑93 (MQ=255)
                 gTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCAcc                                                                      <  1:2565166/93‑1 (MQ=255)
                  tCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCg                                                                     >  1:6609075/1‑93 (MQ=255)
                   cTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGt                                                                    <  1:3844962/93‑1 (MQ=255)
                    tGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGtt                                                                   <  1:3587992/93‑1 (MQ=255)
                    tGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGtt                                                                   >  2:1581832/1‑93 (MQ=255)
                        aGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAAtt                                                               <  1:703073/93‑1 (MQ=255)
                        aGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAAtt                                                               >  2:1331863/1‑93 (MQ=255)
                         ggCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTc                                                              <  2:1440476/93‑1 (MQ=255)
                         ggCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGACCGTATCTTCAGCCCATTCACCGTTAATTc                                                              >  2:5439743/1‑93 (MQ=255)
                           ccgccAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCaa                                                            <  1:1360854/93‑1 (MQ=255)
                            cgccAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAAt                                                           >  2:1184361/1‑93 (MQ=255)
                             gccAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAAtt                                                          >  1:1248830/1‑93 (MQ=255)
                              ccAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCACttt                                                         >  2:387724/1‑93 (MQ=255)
                               cAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAAtttt                                                        >  2:4223656/1‑93 (MQ=255)
                               cAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAAtttt                                                        >  2:1122207/1‑93 (MQ=255)
                                aaCATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTc                                                       <  1:1016706/93‑1 (MQ=255)
                                aaCATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTc                                                       >  1:1856684/1‑93 (MQ=255)
                                 aCATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCa                                                      <  1:39707/93‑1 (MQ=255)
                                 aCATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCa                                                      >  2:4484825/1‑93 (MQ=255)
                                     gtgCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTATTGTGCCCGTTTCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGc                                                  >  2:6646449/1‑93 (MQ=255)
                                     gtgCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGc                                                  <  2:1712273/93‑1 (MQ=255)
                                     gtgCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGc                                                  <  1:4710624/93‑1 (MQ=255)
                                      tgCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCg                                                 <  2:2351989/93‑1 (MQ=255)
                                      tgCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCg                                                 <  1:2964343/93‑1 (MQ=255)
                                        cagcaACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGtt                                               <  1:1771668/93‑1 (MQ=255)
                                         agcaACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTa                                              <  2:1357130/93‑1 (MQ=255)
                                          gcaTCGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTaa                                             <  1:3654331/93‑1 (MQ=255)
                                          gcaACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTaa                                             >  1:3196514/1‑93 (MQ=255)
                                           caACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAAt                                            <  2:6271994/93‑1 (MQ=255)
                                            aaCGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCCTTCACCGTTAATTCAATTTTCACGGCGTTaact                                           >  1:4408597/1‑91 (MQ=255)
                                            aaCGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAAtt                                           <  2:5629320/93‑1 (MQ=255)
                                             aCGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTc                                          <  1:242451/93‑1 (MQ=255)
                                             aCGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTc                                          >  2:775145/1‑93 (MQ=255)
                                              cGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTcc                                         >  1:1069095/1‑93 (MQ=255)
                                               ggTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCt                                        <  1:944097/93‑1 (MQ=255)
                                               ggTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCt                                        <  1:5524142/93‑1 (MQ=255)
                                               ggTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTTATTCCt                                        >  2:4561345/1‑93 (MQ=255)
                                               ggTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCt                                        >  1:1212162/1‑93 (MQ=255)
                                                gTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCtt                                       >  2:4393971/1‑93 (MQ=255)
                                                   tATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTaa                                    >  1:5651129/1‑93 (MQ=255)
                                                   tATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTaa                                    >  2:185890/1‑93 (MQ=255)
                                                   tATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTaa                                    >  2:3694112/1‑93 (MQ=255)
                                                   tATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTaa                                    >  2:2136433/1‑93 (MQ=255)
                                                   tATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTaa                                    >  2:6517538/1‑93 (MQ=255)
                                                   tATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTaa                                    >  2:4580890/1‑93 (MQ=255)
                                                    aTGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAg                                   >  1:2664980/1‑93 (MQ=255)
                                                     tGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAgg                                  <  2:3627384/93‑1 (MQ=255)
                                                     tGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAgg                                  <  2:2825223/93‑1 (MQ=255)
                                                      gTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAggt                                 <  1:3483168/93‑1 (MQ=255)
                                                      gTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAggt                                 >  2:5852113/1‑93 (MQ=255)
                                                        aCATTTTCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAggtgg                               >  2:5155738/1‑93 (MQ=255)
                                                           ttttCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCg                            >  2:2015673/1‑93 (MQ=255)
                                                              tCAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTa                         >  1:4261657/1‑93 (MQ=255)
                                                               cAATCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTAc                        >  2:4749002/1‑93 (MQ=255)
                                                                aaTCTCTTCGTTCTGGTACCGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACt                       >  2:5954328/1‑93 (MQ=255)
                                                                 aTCTCTTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTg                      >  1:1077015/1‑93 (MQ=255)
                                                                   ctctTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGcc                    <  2:5987802/93‑1 (MQ=255)
                                                                   ctctTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGcc                    >  1:1397212/1‑93 (MQ=255)
                                                                    tctTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCa                   >  2:6588867/1‑93 (MQ=255)
                                                                    tctTCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCa                   <  1:2024037/93‑1 (MQ=255)
                                                                      ttCGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATGCCTTTAAGGTGGTCGTTACTGCCAGc                 >  1:5360935/1‑93 (MQ=255)
                                                                        cGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGt               >  1:3530668/1‑93 (MQ=255)
                                                                        cGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGt               <  1:1907634/93‑1 (MQ=255)
                                                                        cGTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGt               <  2:550614/93‑1 (MQ=255)
                                                                         gTTCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTc              >  2:2576653/1‑93 (MQ=255)
                                                                          ttCTGGAACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGGCAGCGTCa             >  1:5204787/1‑93 (MQ=255)
                                                                           tCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAg            >  1:6166804/1‑93 (MQ=255)
                                                                           tCTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAg            <  2:2503876/93‑1 (MQ=255)
                                                                            cTGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAgc           <  1:4968054/93‑1 (MQ=255)
                                                                             tGGTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAgcg          >  1:5062468/1‑93 (MQ=255)
                                                                              ggTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAgcgc         <  1:2280894/93‑1 (MQ=255)
                                                                              ggTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAgcgc         <  1:1734790/93‑1 (MQ=255)
                                                                              ggTACTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAgcgc         <  1:4550446/93‑1 (MQ=255)
                                                                               gTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGcc        >  2:5925540/1‑93 (MQ=255)
                                                                                tACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCg       >  2:942148/1‑93 (MQ=255)
                                                                                 aCTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGt      <  1:5424033/93‑1 (MQ=255)
                                                                                  cTGTGCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGtt     >  1:5673868/1‑93 (MQ=255)
                                                                                   tgtgCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGttt    <  2:336301/93‑1 (MQ=255)
                                                                                    gtgCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGtttt   >  1:4801175/1‑93 (MQ=255)
                                                                                    gtgCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGtttt   <  2:3544968/93‑1 (MQ=255)
                                                                                     tgCCCGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGTTTTg  >  1:6279527/1‑93 (MQ=255)
                                                                                         |                                                                                        
GCCGCTGCGGATTTACCGTCTGTAAGGCCGCCAACATGTGCAGCAACGGTTTATGTACATTTTCAATCTCTTCGTTCTGGTACTGTGCCTGTATCTTCAGCCCATTCACCGTTAATTCAATTTTCACGGCGTTAATTCCTTTAAGGTGGTCGTTACTGCCAGCGTCAGCGCCGTTTTG  >  NC_000913/3072583‑3072760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: