Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,207,904 A→G V94A (GTG→GCG)  ygjD ← putative O‑sialoglycoprotein endopeptidase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,207,9040AG86.4% 644.1 / 80.9 244V94A (GTG→GCG) ygjDputative O‑sialoglycoprotein endopeptidase
Reads supporting (aligned to +/- strand):  ref base A (18/15);  new base G (117/93);  total (136/108)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.88e-01

Only 100 of 256 total aligned reads displayed.

TTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTT  >  NC_000913/3207814‑3207996
                                                                                          |                                                                                            
ttATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCcgcg                                                                                            <  2:475997/93‑1 (MQ=255)
ttATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACg                                                                                            <  1:5665911/93‑1 (MQ=255)
 tATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCgg                                                                                           >  1:1038126/1‑93 (MQ=255)
  aTCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGt                                                                                          >  2:6158966/1‑93 (MQ=255)
     ttCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGGACAGGGATTGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTcgc                                                                                       >  2:6549963/1‑93 (MQ=255)
      tCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTcgcg                                                                                      >  1:1153772/1‑93 (MQ=255)
      tCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTcgcg                                                                                      >  1:6167403/1‑93 (MQ=255)
        cAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGcc                                                                                    <  1:5953858/93‑1 (MQ=255)
          gCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCaa                                                                                  >  2:2166598/1‑93 (MQ=255)
          gCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCaa                                                                                  >  2:5385431/1‑93 (MQ=255)
            aTCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAAcc                                                                                <  1:1826000/93‑1 (MQ=255)
            aTCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAAcc                                                                                >  1:6423725/1‑93 (MQ=255)
            aTCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAAcc                                                                                >  2:3582019/1‑93 (MQ=255)
            aTCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAAcc                                                                                >  1:3456540/1‑93 (MQ=255)
            aTCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAAca                                                                                >  1:1452996/1‑92 (MQ=255)
             tCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCa                                                                               >  1:4463514/1‑93 (MQ=255)
             tCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGTCAACCa                                                                               >  2:6300271/1‑93 (MQ=255)
              cGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAg                                                                              >  1:2047136/1‑93 (MQ=255)
              cGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAg                                                                              <  1:1591890/93‑1 (MQ=255)
              cGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAg                                                                              <  2:4279023/93‑1 (MQ=255)
              cGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAg                                                                              <  1:3568626/93‑1 (MQ=255)
               ggCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGt                                                                             <  1:3913528/93‑1 (MQ=255)
                gcgcTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTa                                                                            <  2:3763963/93‑1 (MQ=255)
                  gcTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgc                                                                          <  2:1259036/93‑1 (MQ=255)
                    tAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgcgc                                                                        <  1:4236496/93‑1 (MQ=255)
                    tAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgcgc                                                                        <  2:1646559/93‑1 (MQ=255)
                    tAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgcgc                                                                        >  2:3375316/1‑93 (MQ=255)
                    tAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgcgc                                                                        >  1:5173556/1‑93 (MQ=255)
                    tAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAgcgc                                                                        >  1:4305969/1‑93 (MQ=255)
                     aaCAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgcgcg                                                                       >  1:4519858/1‑93 (MQ=255)
                      aCAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCTGTAgcgcgc                                                                      >  2:2931108/1‑93 (MQ=255)
                      aCAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAgcgcgc                                                                      >  2:6075052/1‑93 (MQ=255)
                       cAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGcc                                                                     >  1:395507/1‑93 (MQ=255)
                         gATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCgc                                                                   >  2:5507730/1‑92 (MQ=255)
                         gATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGa                                                                   <  2:4119436/93‑1 (MQ=255)
                         gATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGa                                                                   >  2:3665855/1‑93 (MQ=255)
                          aTGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGAc                                                                  >  2:1802826/1‑93 (MQ=255)
                            gCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTa                                                                <  1:3196488/93‑1 (MQ=255)
                             cccTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCTCGGTCGCGCCAACCAGTAGCGCGCCGACTaa                                                               >  2:5259612/1‑93 (MQ=255)
                              ccTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAAt                                                              >  2:3199827/1‑93 (MQ=255)
                              ccTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAAt                                                              >  2:2546394/1‑93 (MQ=255)
                               cTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAGCGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATc                                                             <  2:5956083/93‑1 (MQ=255)
                               cTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATc                                                             >  1:2312402/1‑93 (MQ=255)
                                ttCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATcc                                                            >  2:4199492/1‑93 (MQ=255)
                                ttCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATcc                                                            <  2:1436440/93‑1 (MQ=255)
                                 tCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCa                                                           >  2:3844255/1‑93 (MQ=255)
                                 tCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCa                                                           >  1:3858838/1‑93 (MQ=255)
                                 tCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCa                                                           >  2:5805512/1‑93 (MQ=255)
                                   cATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAgg                                                         <  1:937819/93‑1 (MQ=255)
                                    atatGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAggg                                                        >  2:5888046/1‑93 (MQ=255)
                                      atGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGcc                                                      <  2:189420/93‑1 (MQ=255)
                                      atGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGcc                                                      <  2:4984303/93‑1 (MQ=255)
                                      atGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGcc                                                      <  2:623856/93‑1 (MQ=255)
                                      atGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGcc                                                      <  2:680045/93‑1 (MQ=255)
                                       tGGTGTACAGGGATCGCCGGAGCGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCt                                                     <  2:752499/93‑1 (MQ=255)
                                       tGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCt                                                     <  1:6605377/93‑1 (MQ=255)
                                         gtgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGc                                                   <  1:691031/93‑1 (MQ=255)
                                         gtgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGc                                                   <  1:2499292/93‑1 (MQ=255)
                                         gtgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGc                                                   <  2:4973801/93‑1 (MQ=255)
                                          tgtACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCg                                                  <  2:2523163/93‑1 (MQ=255)
                                            tACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCACCGCGGCCGCGCCAACCAGTAGCGCGCCGACTAATGCAGGGCCTGCGGt                                                >  1:1900663/1‑93 (MQ=255)
                                             aCAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGta                                               >  1:2104344/1‑93 (MQ=255)
                                              cAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGtat                                              >  1:309649/1‑93 (MQ=255)
                                               aGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGtata                                             <  2:911299/93‑1 (MQ=255)
                                                 ggATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAgg                                           >  1:1644224/1‑93 (MQ=255)
                                                  gATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGc                                          <  2:2143611/93‑1 (MQ=255)
                                                   aTCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGcc                                         >  1:271302/1‑93 (MQ=255)
                                                     cGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCcac                                       >  2:119805/1‑93 (MQ=255)
                                                      gCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCcaca                                      >  2:5431340/1‑93 (MQ=255)
                                                        cGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGc                                    >  1:880141/1‑93 (MQ=255)
                                                         ggAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGGCGCGCCAACCAGTAGCGCGCCGACTAATCCAGAGCCTGCGGTATAGGCCACAGCa                                   >  1:3360597/1‑93 (MQ=255)
                                                          gAACGTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCAt                                  >  2:2854810/1‑93 (MQ=255)
                                                          gAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCAt                                  >  1:3967461/1‑93 (MQ=255)
                                                              gTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAAt                              <  1:3680724/93‑1 (MQ=255)
                                                              gTCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAAt                              >  1:2854805/1‑93 (MQ=255)
                                                               tCCCAGGCAAACGCCAGGGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATg                             <  1:1005520/93‑1 (MQ=255)
                                                               tCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATg                             >  2:6047928/1‑93 (MQ=255)
                                                               tCCCAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATg                             <  1:4834453/93‑1 (MQ=255)
                                                                cccAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGt                            >  1:4974865/1‑93 (MQ=255)
                                                                 ccAGGCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTc                           <  1:5278353/93‑1 (MQ=255)
                                                                   aGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCtt                         >  2:1547573/1‑93 (MQ=255)
                                                                    ggCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCttt                        >  2:568157/1‑93 (MQ=255)
                                                                    ggCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCttt                        <  2:601042/93‑1 (MQ=255)
                                                                    ggCAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCttt                        <  2:4883211/93‑1 (MQ=255)
                                                                      cAAACGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTg                      <  1:5517498/93‑1 (MQ=255)
                                                                       aaaCGCCAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGc                     >  1:5229043/1‑93 (MQ=255)
                                                                        aaCGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGcc                    >  1:6280219/1‑93 (MQ=255)
                                                                           gCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGtt                 >  2:1180750/1‑93 (MQ=255)
                                                                            ccAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTa                >  2:3008697/1‑93 (MQ=255)
                                                                            ccAGAGAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTa                <  2:5188396/93‑1 (MQ=255)
                                                                              agagAACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTaaa              >  1:4063937/1‑93 (MQ=255)
                                                                               gagaACGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAAc             <  2:4447639/93‑1 (MQ=255)
                                                                                agaACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAAcc            <  2:5656096/93‑1 (MQ=255)
                                                                                   aCGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGa         >  1:1290536/1‑93 (MQ=255)
                                                                                   aCGCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGa         >  2:3072756/1‑93 (MQ=255)
                                                                                     gCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACt       <  2:2044135/93‑1 (MQ=255)
                                                                                     gCCCCGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACt       >  1:5867336/1‑93 (MQ=255)
                                                                                       cccGCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTcc     >  2:825860/1‑93 (MQ=255)
                                                                                        ccACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCt    <  2:2357885/93‑1 (MQ=255)
                                                                                          aCGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCttt  >  1:1419377/1‑93 (MQ=255)
                                                                                          |                                                                                            
TTATCTTCCAGCATCGGCGCTAACAGATGCCCTTCCATATGGTGTACAGGGATCGCCGGAACGTCCCAGGCAAACGCCAGAGAACGCCCCACGGTCGCGCCAACCAGTAGCGCGCCGACTAATCCAGGGCCTGCGGTATAGGCCACAGCATCAATGTCTTTTGCCGTTAAACCAGACTCCTTT  >  NC_000913/3207814‑3207996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: