Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,659,028 A→G T329A (ACC→GCC)  yhiV → putative transport system permease protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,659,0280AG80.4% 618.5 / 154.6 287T329A (ACC→GCC) yhiVputative transport system permease protein
Reads supporting (aligned to +/- strand):  ref base A (31/25);  new base G (121/109);  total (152/135)
Fisher's exact test for biased strand distribution p-value = 7.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01

Only 100 of 302 total aligned reads displayed.

GCCCTGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGTTTTTG  >  NC_000913/3658938‑3659120
                                                                                          |                                                                                            
   cTGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACg                                                                                         >  2:2206459/1‑93 (MQ=255)
    tGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGc                                                                                        <  2:3308127/93‑1 (MQ=255)
    tGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGc                                                                                        >  2:6393553/1‑93 (MQ=255)
    tGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGc                                                                                        <  1:2410789/93‑1 (MQ=255)
    tGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGc                                                                                        >  2:2802139/1‑93 (MQ=255)
      gATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCg                                                                                      <  2:361082/93‑1 (MQ=255)
        tACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGtt                                                                                    <  2:6327357/93‑1 (MQ=255)
           cTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTAt                                                                                 <  2:1353498/93‑1 (MQ=255)
           cTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTAt                                                                                 <  2:6112171/93‑1 (MQ=255)
           cTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTAt                                                                                 <  2:4611980/93‑1 (MQ=255)
             cgcgGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCg                                                                               >  2:1127525/1‑93 (MQ=255)
             cgcgGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCg                                                                               <  2:4218343/93‑1 (MQ=255)
              gcgGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGa                                                                              >  2:2173896/1‑93 (MQ=255)
               cgGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGaa                                                                             >  2:2273548/1‑93 (MQ=255)
               cgGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGaa                                                                             >  1:2960717/1‑93 (MQ=255)
               cgGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGGTTATCCTTACGACACCACGCCGTTTATCGaa                                                                             >  1:1126393/1‑93 (MQ=255)
                gggCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGaaa                                                                            <  2:3698434/93‑1 (MQ=255)
                gggCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGaaa                                                                            >  1:465893/1‑93 (MQ=255)
                gggCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGaaa                                                                            >  1:4001374/1‑93 (MQ=255)
                 ggCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAAt                                                                           <  1:4784075/93‑1 (MQ=255)
                 ggCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAAt                                                                           >  2:3877460/1‑93 (MQ=255)
                  gCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAATACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAAtt                                                                          >  2:627389/1‑93 (MQ=255)
                  gCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAAtt                                                                          >  2:3244496/1‑93 (MQ=255)
                  gCAGTAAAAGAGAAACTCAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAAtt                                                                          <  2:5870130/93‑1 (MQ=255)
                    aGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTc                                                                        >  1:5331167/1‑93 (MQ=255)
                     gTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCt                                                                       >  1:4983193/1‑93 (MQ=255)
                     atCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCt                                                                       >  1:6384074/2‑93 (MQ=255)
                       cAAAGAGGAGCTGATCCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTAt                                                                     <  1:3755129/93‑1 (MQ=255)
                          agagGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCa                                                                  <  1:3696718/93‑1 (MQ=255)
                          agagGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCa                                                                  >  1:5469163/1‑93 (MQ=255)
                          agagGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCa                                                                  >  1:1896659/1‑93 (MQ=255)
                            agGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAgg                                                                <  2:2830126/93‑1 (MQ=255)
                               aaCTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAg                                                             >  1:4136067/1‑93 (MQ=255)
                                aCTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGt                                                            >  1:1768093/1‑93 (MQ=255)
                                 cTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGtt                                                           <  2:1915135/93‑1 (MQ=255)
                                  tGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGttt                                                          <  2:2422250/93‑1 (MQ=255)
                                    aaCCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTc                                                        <  1:4852051/93‑1 (MQ=255)
                                    aaCCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTc                                                        >  2:1434727/1‑93 (MQ=255)
                                      ccGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCaa                                                      <  1:5974169/93‑1 (MQ=255)
                                        gCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCaaaa                                                    <  2:5584645/93‑1 (MQ=255)
                                        gCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGGTTATCCTTACGACGCCACGCCGCTTATCGAAATTTCTATTCAGGAAGTTTTCaaaa                                                    >  1:752353/1‑93 (MQ=255)
                                         cTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAac                                                   >  2:3457870/1‑93 (MQ=255)
                                           tATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAacac                                                 >  2:4379556/1‑93 (MQ=255)
                                             tCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTg                                               <  1:728688/93‑1 (MQ=255)
                                             tCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTg                                               >  2:508490/1‑93 (MQ=255)
                                              cAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGCAATTTCTATTCAGGAAGTTTTCAAAACACTgg                                              >  1:4907604/1‑93 (MQ=255)
                                              cAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTgg                                              >  1:1980651/1‑93 (MQ=255)
                                                gCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGtt                                            <  1:2566779/93‑1 (MQ=255)
                                                gCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGtt                                            >  2:1024300/1‑93 (MQ=255)
                                                gCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGtt                                            <  1:2149329/93‑1 (MQ=255)
                                                gCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGtt                                            <  2:4857611/93‑1 (MQ=255)
                                                gCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGtt                                            >  1:3308119/1‑93 (MQ=255)
                                                 ccTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTg                                           >  1:427464/1‑93 (MQ=255)
                                                   tATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAGAACACTGGTTGAg                                         <  1:5819490/93‑1 (MQ=255)
                                                   tATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAg                                         >  1:3461502/1‑93 (MQ=255)
                                                   tATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAg                                         <  2:810929/93‑1 (MQ=255)
                                                   tATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAg                                         <  2:4080844/93‑1 (MQ=255)
                                                    aTTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAgg                                        <  1:2890095/93‑1 (MQ=255)
                                                     tttCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGc                                       <  1:1044967/93‑1 (MQ=255)
                                                     tttCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGc                                       <  1:3120542/93‑1 (MQ=255)
                                                     tttCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGc                                       <  1:2485036/93‑1 (MQ=255)
                                                     tttCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGc                                       >  1:6561675/1‑93 (MQ=255)
                                                      ttCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCAAGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCt                                      >  2:3187599/1‑93 (MQ=255)
                                                        cccGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGCTTATCGAAATTTCTATTCAGGAAGTTTTCAACACACTGGTTGAGGCTat                                    >  2:4710619/1‑93 (MQ=255)
                                                         ccGGCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTatc                                   >  2:596157/1‑93 (MQ=255)
                                                          cGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTatca                                  <  2:6639917/93‑1 (MQ=255)
                                                           ggCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTatcat                                 >  1:5592916/1‑93 (MQ=255)
                                                           ggCAAGTCTGAAGACGGATTATGCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGATatcat                                 >  2:6498689/1‑93 (MQ=255)
                                                            gCAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTatcatc                                <  1:6062122/93‑1 (MQ=255)
                                                             cAAGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATcc                               <  2:1590768/93‑1 (MQ=255)
                                                              aaGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCt                              >  2:1293674/1‑93 (MQ=255)
                                                              aaGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCt                              >  1:444534/1‑93 (MQ=255)
                                                               aGTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTa                             >  1:5209112/1‑93 (MQ=255)
                                                                gTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAg                            >  2:5239765/1‑93 (MQ=255)
                                                                gTCTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAg                            >  2:3388187/1‑93 (MQ=255)
                                                                  cTGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTc                          <  1:5092489/93‑1 (MQ=255)
                                                                   tGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCt                         <  1:267778/93‑1 (MQ=255)
                                                                   tGAAGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCt                         >  2:1812366/1‑93 (MQ=255)
                                                                      aGACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTcc                      >  1:908507/1‑93 (MQ=255)
                                                                       gACGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCt                     <  1:3578960/93‑1 (MQ=255)
                                                                       gACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCt                     <  2:1652781/93‑1 (MQ=255)
                                                                        aCGGTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTg                    <  1:574097/93‑1 (MQ=255)
                                                                        aCGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTg                    <  1:1306525/93‑1 (MQ=255)
                                                                           gTTTATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTc                 <  2:6220096/93‑1 (MQ=255)
                                                                            tttATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCa                >  2:2692240/1‑93 (MQ=255)
                                                                             ttATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCAt               <  2:5642990/93‑1 (MQ=255)
                                                                             ttATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCAt               >  2:4812150/1‑93 (MQ=255)
                                                                              tATCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATg              <  2:3125931/93‑1 (MQ=255)
                                                                               aTCCTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGt             >  1:1003583/1‑93 (MQ=255)
                                                                                 ccTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTAt           >  2:4332828/1‑93 (MQ=255)
                                                                                  cTTACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATc          <  1:3187862/93‑1 (MQ=255)
                                                                                   ttACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCt         <  1:1637472/93‑1 (MQ=255)
                                                                                    tACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTg        >  2:5711034/1‑93 (MQ=255)
                                                                                    tACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTg        >  1:394881/1‑93 (MQ=255)
                                                                                    tACGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTg        <  2:304764/93‑1 (MQ=255)
                                                                                     acgacgCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGt       >  2:2540927/1‑93 (MQ=255)
                                                                                     aCGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGt       <  1:1376449/93‑1 (MQ=255)
                                                                                      cGACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGtt      <  2:717127/93‑1 (MQ=255)
                                                                                       gACGCCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGttt     >  2:5288247/1‑93 (MQ=255)
                                                                                          accacGCCATTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGTTTTTg  >  1:6480251/1‑93 (MQ=255)
                                                                                          |                                                                                            
GCCCTGGATACCTCGCGGGCAGTCAAAGAGGAACTGAACCGCTTATCAGCCTATTTCCCGGCAAGTCTGAAGACGGTTTATCCTTACGACACCACGCCGTTTATCGAAATTTCTATTCAGGAAGTTTTCAAAACACTGGTTGAGGCTATCATCCTAGTCTTCCTGGTCATGTATCTGTTTTTG  >  NC_000913/3658938‑3659120

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: