Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,663,106 A→G L112P (CTA→CCA)  yhiX ← putative ARAC‑type regulatory protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,663,1060AG99.7% 1229.4 / ‑6.6 328L112P (CTA→CCA) yhiXputative ARAC‑type regulatory protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (166/161);  minor base T (0/1);  total (166/162)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 328 total aligned reads displayed.

TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT  >  NC_000913/3663016‑3663195
                                                                                          |                                                                                         
ttCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGc                                                                                         >  2:1272030/1‑93 (MQ=255)
  cGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAt                                                                                       <  2:1208311/93‑1 (MQ=255)
    gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt                                                                                     >  1:770388/1‑93 (MQ=255)
    gTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCAttt                                                                                     >  2:6014075/1‑93 (MQ=255)
     ttGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTc                                                                                    <  1:2439431/93‑1 (MQ=255)
      tGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCt                                                                                   >  1:4163454/1‑93 (MQ=255)
       gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg                                                                                  <  2:5170673/93‑1 (MQ=255)
       gTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTg                                                                                  >  1:2079510/1‑93 (MQ=255)
        tAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGc                                                                                 >  2:3661998/1‑93 (MQ=255)
         aaaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCa                                                                                <  2:785633/93‑1 (MQ=255)
          aaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAt                                                                               >  2:6123784/1‑93 (MQ=255)
          aaaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCAt                                                                               >  1:1741912/1‑93 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCCTTTCTGCATa                                                                              <  1:4071710/93‑1 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa                                                                              <  2:5080417/93‑1 (MQ=255)
           aaCGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATa                                                                              >  1:3762470/1‑93 (MQ=255)
             cGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGc                                                                            <  1:2126805/93‑1 (MQ=255)
             cGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGc                                                                            <  2:5011429/93‑1 (MQ=255)
              gTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCg                                                                           >  1:6598727/1‑93 (MQ=255)
              gTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTATGCATAGCg                                                                           <  1:5270838/93‑1 (MQ=255)
               ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGa                                                                          >  2:27235/1‑93 (MQ=255)
               ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGa                                                                          >  1:5428771/1‑93 (MQ=255)
                tCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGaa                                                                         >  1:4593028/1‑93 (MQ=255)
                tCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGaa                                                                         <  2:718156/93‑1 (MQ=255)
                  aGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGa                                                                       <  1:1552569/93‑1 (MQ=255)
                    aaGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGAtt                                                                     <  1:6119863/93‑1 (MQ=255)
                       cagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCtt                                                                  <  1:151093/93‑1 (MQ=255)
                       cagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCtt                                                                  <  1:481339/93‑1 (MQ=255)
                       cagcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCtt                                                                  >  1:5013016/1‑93 (MQ=255)
                         gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt                                                                >  2:3059239/1‑93 (MQ=255)
                         gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt                                                                >  2:3169917/1‑93 (MQ=255)
                         gcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAt                                                                >  2:3781085/1‑93 (MQ=255)
                          cGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTAtt                                                               >  1:2973581/1‑93 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             <  1:2336431/93‑1 (MQ=255)
                            gTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCt                                                             >  1:1691277/1‑93 (MQ=255)
                               taAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCg                                                          >  2:1481772/1‑93 (MQ=255)
                               taAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCg                                                          >  2:5846410/1‑93 (MQ=255)
                                aaaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGa                                                         >  1:4103626/1‑93 (MQ=255)
                                aaaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGa                                                         <  2:343111/93‑1 (MQ=255)
                                 aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt                                                        >  1:719569/1‑93 (MQ=255)
                                 aaGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGAt                                                        <  2:5663101/93‑1 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     >  2:3321072/1‑93 (MQ=255)
                                    tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGt                                                     >  1:5651768/1‑93 (MQ=255)
                                     gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt                                                    <  1:110661/93‑1 (MQ=255)
                                     gCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGtt                                                    <  2:2423543/93‑1 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  >  2:467234/1‑93 (MQ=255)
                                       tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgc                                                  >  2:5309618/1‑93 (MQ=255)
                                         aTCCTCAAGAAAAACAGATGACAACGCAAAGATTAATGCTCTTTTGCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgcgc                                                <  2:6293898/93‑1 (MQ=255)
                                         aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTgcgc                                                >  1:3977619/1‑93 (MQ=255)
                                          tCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCa                                               >  1:2378873/1‑93 (MQ=255)
                                          tCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCa                                               >  1:3180034/1‑93 (MQ=255)
                                           ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCaa                                              <  2:432741/93‑1 (MQ=255)
                                           ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCaa                                              >  1:3449122/1‑93 (MQ=255)
                                            cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAAc                                             <  2:1054417/93‑1 (MQ=255)
                                              cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACtt                                           >  1:2016548/1‑93 (MQ=255)
                                               aaGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTc                                          >  2:4467678/1‑93 (MQ=255)
                                               aaGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTc                                          <  2:4214542/93‑1 (MQ=255)
                                                 gAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCt                                        >  1:4540814/1‑93 (MQ=255)
                                                   aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGa                                      >  1:6311426/1‑93 (MQ=255)
                                                   aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGa                                      >  1:4729621/1‑93 (MQ=255)
                                                        aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc                                 <  1:1237455/93‑1 (MQ=255)
                                                        aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc                                 >  2:1626567/1‑93 (MQ=255)
                                                        aGATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAAc                                 >  1:3613659/1‑93 (MQ=255)
                                                         gATAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACa                                <  1:2047251/93‑1 (MQ=255)
                                                          aTAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAg                               <  1:4654691/93‑1 (MQ=255)
                                                          aTAACAACGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAg                               <  2:3586213/93‑1 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             >  2:1406394/1‑93 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             >  1:5301193/1‑93 (MQ=255)
                                                            aacaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGa                             >  1:896572/1‑93 (MQ=255)
                                                             acaacGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGaa                            <  2:3192689/93‑1 (MQ=255)
                                                                 cGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtc                        >  1:1377574/1‑93 (MQ=255)
                                                                 cGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtc                        <  1:1934152/93‑1 (MQ=255)
                                                                 cGCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtc                        <  1:6266471/93‑1 (MQ=255)
                                                                  gCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtct                       >  2:2868115/1‑93 (MQ=255)
                                                                  gCAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtct                       >  1:3873838/1‑93 (MQ=255)
                                                                   gaaaGATTAATGCTCTTTTACGTTGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctt                      <  1:4499971/92‑2 (MQ=255)
                                                                   cAAAGATTAATTCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      <  2:1741521/93‑1 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      <  1:5790695/93‑1 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      <  2:3234022/93‑1 (MQ=255)
                                                                   cAAAGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATAtctc                      <  2:5556809/93‑1 (MQ=255)
                                                                    aaaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATctct                     >  2:11547/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta                    >  2:5950394/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta                    >  1:2603022/1‑93 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta                    <  1:4274802/93‑1 (MQ=255)
                                                                     aaGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTcta                    >  2:3734402/1‑93 (MQ=255)
                                                                      aGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctac                   <  2:2167653/93‑1 (MQ=255)
                                                                      aGATTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctac                   >  1:3360719/1‑93 (MQ=255)
                                                                        aTTAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTctacta                 >  2:156511/1‑93 (MQ=255)
                                                                          tAATGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACa               <  2:1911432/93‑1 (MQ=255)
                                                                           aaTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAg              >  2:659190/1‑93 (MQ=255)
                                                                            aTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGt             <  2:2081746/93‑1 (MQ=255)
                                                                            aTGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGt             <  1:5201729/93‑1 (MQ=255)
                                                                             tGCTCTTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtg            <  1:3704068/93‑1 (MQ=255)
                                                                               ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  2:3988517/93‑1 (MQ=255)
                                                                               ctctTTTACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGtgat          <  2:4754428/93‑1 (MQ=255)
                                                                                  ttttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGaa       >  2:5729089/1‑93 (MQ=255)
                                                                                   tttACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAAc      <  2:2557758/93‑1 (MQ=255)
                                                                                     tACGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGa    >  2:2619601/1‑93 (MQ=255)
                                                                                      aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAg   >  2:4875485/1‑93 (MQ=255)
                                                                                      aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAg   >  2:2935262/1‑93 (MQ=255)
                                                                                      aCGTGGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATCAACGAg   <  1:5521956/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTCGGTTGTAAAACGTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAGCATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGGAATATCTCTACTACAGTGATGAACGAGT  >  NC_000913/3663016‑3663195

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: