Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,667,459 G→A D80N (GAC→AAC)  treF → cytoplasmic trehalase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,667,4590GA88.0% 699.7 / 60.8 233D80N (GAC→AAC) treFcytoplasmic trehalase
Reads supporting (aligned to +/- strand):  ref base G (16/12);  new base A (114/91);  total (130/103)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 240 total aligned reads displayed.

CCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTTTGTT  >  NC_000913/3667367‑3667548
                                                                                            |                                                                                         
cctCTGCTGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCg                                                                                           >  2:1213756/1‑93 (MQ=255)
 ctctGATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGa                                                                                          >  2:5009494/1‑93 (MQ=255)
  tctGATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAAc                                                                                         >  1:1302422/1‑93 (MQ=255)
     gATGCGCTGTCGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGCCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTgc                                                                                      <  1:3839739/93‑1 (MQ=255)
     gATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTgc                                                                                      <  2:3083094/93‑1 (MQ=255)
     gATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTgc                                                                                      >  1:6359290/1‑93 (MQ=255)
      aTGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTgcg                                                                                     <  1:1819387/93‑1 (MQ=255)
        gcgcTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCa                                                                                   <  1:6151098/93‑1 (MQ=255)
           cTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCt                                                                                >  2:372396/1‑93 (MQ=255)
             gACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCCACTGCGCACCTaa                                                                              >  1:4999102/1‑93 (MQ=255)
              aCGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTaaa                                                                             >  1:3001633/1‑93 (MQ=255)
              aCGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAAACTTTCCCAACTGCGCACCTaaa                                                                             >  1:5766000/1‑93 (MQ=255)
               cGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTaaaa                                                                            <  2:2204520/93‑1 (MQ=255)
                 ccTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATg                                                                          <  1:2457929/93‑1 (MQ=255)
                  cTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATgg                                                                         >  2:2339982/1‑93 (MQ=255)
                   tGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAACCATTTCCAAACTGGGACCCTAAATTGGa                                                                        >  2:2857079/1‑93 (MQ=255)
                   tGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGa                                                                        <  1:2353429/93‑1 (MQ=255)
                    gCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGAc                                                                       <  1:1420632/93‑1 (MQ=255)
                     ccGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGAcc                                                                      <  2:5180701/93‑1 (MQ=255)
                          cGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTg                                                                 <  2:4810272/93‑1 (MQ=255)
                           gCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTgg                                                                >  1:85392/1‑93 (MQ=255)
                             tATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGat                                                              >  1:1527966/1‑93 (MQ=255)
                              aTCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGata                                                             >  2:289692/1‑93 (MQ=255)
                              aTCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGatc                                                             >  2:4566512/1‑92 (MQ=255)
                              aTCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGata                                                             >  2:443559/1‑93 (MQ=255)
                               tctcGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGatat                                                            <  1:5739065/93‑1 (MQ=255)
                                ctcGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATc                                                           <  1:4225184/93‑1 (MQ=255)
                                 tcGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCt                                                          >  1:590844/1‑93 (MQ=255)
                                   gAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTa                                                        >  1:4886393/1‑93 (MQ=255)
                                   gAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTa                                                        >  1:3424463/1‑93 (MQ=255)
                                    aaCTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTaa                                                       >  1:4751885/1‑93 (MQ=255)
                                      cTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATc                                                     <  2:6306593/93‑1 (MQ=255)
                                      cTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATc                                                     <  1:1554613/93‑1 (MQ=255)
                                      cTGTTCGAGAATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATc                                                     <  2:5428579/93‑1 (MQ=255)
                                       tGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATcc                                                    >  1:6010614/1‑93 (MQ=255)
                                         ttCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGc                                                  >  2:1982919/1‑93 (MQ=255)
                                          tCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCt                                                 >  1:185348/1‑93 (MQ=255)
                                          tCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCt                                                 <  2:5804333/93‑1 (MQ=255)
                                            gAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTAc                                               >  2:3860943/1‑93 (MQ=255)
                                            gAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTAc                                               >  2:402320/1‑93 (MQ=255)
                                             aGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTAcc                                              >  1:4936097/1‑93 (MQ=255)
                                             aGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTAcc                                              >  1:1750312/1‑93 (MQ=255)
                                             aGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTAcc                                              >  1:5208202/1‑93 (MQ=255)
                                               cATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGt                                            >  2:6607845/1‑93 (MQ=255)
                                                 tGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTaa                                          <  2:2393723/93‑1 (MQ=255)
                                                   ttCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAg                                        <  1:4089120/93‑1 (MQ=255)
                                                   ttCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAg                                        <  2:4715682/93‑1 (MQ=255)
                                                     cAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATACGCTACCGTAAAGTg                                      >  1:2861104/1‑93 (MQ=255)
                                                      aGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgc                                     <  2:5444050/93‑1 (MQ=255)
                                                      aGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgc                                     <  1:5386508/93‑1 (MQ=255)
                                                      aGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgc                                     >  2:1241173/1‑93 (MQ=255)
                                                       gTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgcg                                    >  2:4316395/1‑93 (MQ=255)
                                                       gTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgcg                                    >  2:3255109/1‑93 (MQ=255)
                                                       gTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgcg                                    >  2:1537470/1‑93 (MQ=255)
                                                        tCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgcgc                                   >  1:758354/1‑93 (MQ=255)
                                                        tCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTgcgc                                   >  1:3128455/1‑93 (MQ=255)
                                                         cGGCGAAAATTTTCCCCGACAGTAAATCCTTTCCCAACTGCGCACCTAAAATGGCCCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGcc                                  <  2:2172509/93‑1 (MQ=255)
                                                         cGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGcc                                  >  1:3369740/1‑93 (MQ=255)
                                                           gCGAAAATTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGt                                <  1:3624632/93‑1 (MQ=255)
                                                              aaaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCAt                             <  2:1777682/93‑1 (MQ=255)
                                                              aaaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCAt                             <  2:409933/93‑1 (MQ=255)
                                                              aaaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCAt                             <  1:5089266/93‑1 (MQ=255)
                                                              aaaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCAt                             <  2:3022878/93‑1 (MQ=255)
                                                              aaaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCAt                             >  1:3086145/1‑93 (MQ=255)
                                                              aaaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCATAAAGTGCGCCGTCAt                             >  1:688391/1‑93 (MQ=255)
                                                               aaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATc                            <  2:6294660/93‑1 (MQ=255)
                                                               aaaTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATc                            <  1:459020/93‑1 (MQ=255)
                                                                 aTTTTCCCCGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGt                          <  1:5568723/93‑1 (MQ=255)
                                                                      ccccGACAGTAAACCCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGAttt                     <  2:2739589/93‑1 (MQ=255)
                                                                       cccGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGAtttt                    >  2:5674868/1‑93 (MQ=255)
                                                                         cGACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGa                  >  2:3594313/1‑93 (MQ=255)
                                                                          gACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGAc                 <  2:6059647/93‑1 (MQ=255)
                                                                          gACAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGAc                 >  1:1033040/1‑93 (MQ=255)
                                                                           aCAGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACt                >  1:2615013/1‑93 (MQ=255)
                                                                             aGTAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTg              >  2:3766479/1‑93 (MQ=255)
                                                                               tAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTgcg            >  1:3932722/1‑93 (MQ=255)
                                                                               tAAAACCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTgcg            >  2:1404085/1‑93 (MQ=255)
                                                                                aaaaCCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTgcgc           >  1:6529994/1‑93 (MQ=255)
                                                                                 aaaCCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCa          <  1:2212884/93‑1 (MQ=255)
                                                                                 aaaCCTTTCCCAACTTCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCa          <  1:4402557/93‑1 (MQ=255)
                                                                                  acccTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCaa         <  1:2629736/91‑1 (MQ=255)
                                                                                  aaCCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCaa         >  1:4242679/1‑93 (MQ=255)
                                                                                  aaCCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCaa         <  2:2485337/93‑1 (MQ=255)
                                                                                  aaCCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGAGCGCCGTCATCGCGATTTTGACTTGCGCaa         >  1:593447/1‑93 (MQ=255)
                                                                                   aCCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAg        <  1:923273/93‑1 (MQ=255)
                                                                                   aCCTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAg        >  2:3499769/1‑93 (MQ=255)
                                                                                    ccTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGt       <  1:6217589/93‑1 (MQ=255)
                                                                                     cTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGtt      <  2:1101077/93‑1 (MQ=255)
                                                                                     cTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGtt      >  2:6121302/1‑93 (MQ=255)
                                                                                     cTTTCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGtt      <  2:1285443/93‑1 (MQ=255)
                                                                                      tttCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGttt     >  1:5292773/1‑93 (MQ=255)
                                                                                      tttCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGttt     <  2:52603/93‑1 (MQ=255)
                                                                                      tttCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGttt     >  1:3095905/1‑93 (MQ=255)
                                                                                      tttCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGttt     >  2:6149642/1‑93 (MQ=255)
                                                                                      tttCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGttt     >  2:6225051/1‑93 (MQ=255)
                                                                                       ttCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTttg    >  2:6432856/1‑93 (MQ=255)
                                                                                        tCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTttgt   <  2:268774/93‑1 (MQ=255)
                                                                                        tCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTttgt   <  1:3993120/93‑1 (MQ=255)
                                                                                        tCCCAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTttgt   >  2:1422315/1‑93 (MQ=255)
                                                                                         cccAACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATCTTGACTTGCGCAAGTttgtt  <  1:6503922/93‑1 (MQ=255)
                                                                                            |                                                                                         
CCTCTGATGCGCTGACGCCTGCCGATCGCTATCTCGAACTGTTCGAGCATGTTCAGTCGGCGAAAATTTTCCCCGACAGTAAAACCTTTCCCGACTGCGCACCTAAAATGGACCCGCTGGATATCTTAATCCGCTACCGTAAAGTGCGCCGTCATCGTGATTTTGACTTGCGCAAGTTTGTT  >  NC_000913/3667367‑3667548

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: