Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,021,157 C→T G9G (GGC→GGT
G5G (GGC→GGT
tatD →
b4556 →
Mg‑dependent DNase
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,021,1570CT84.2% 755.4 / 111.1 291G9G (GGC→GGT
G5G (GGC→GGT
tatD
b4556
Mg‑dependent DNase
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (30/16);  new base T (151/94);  total (181/110)
Fisher's exact test for biased strand distribution p-value = 7.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.83e-03

Only 100 of 302 total aligned reads displayed.

GACGCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGG  >  NC_000913/4021066‑4021249
                                                                                            |                                                                                            
 acgCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGgtgt                                                                                            >  1:1500319/1‑93 (MQ=255)
 acgCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGgtgt                                                                                            <  1:5290569/93‑1 (MQ=255)
 acgCAGAAGAAGAAAGCGAAAAACCTGAAGAATAAATTCAACCGCCCGTCGGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGgtgt                                                                                            <  1:1353072/93‑1 (MQ=255)
  cgCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGtt                                                                                           <  1:4162155/93‑1 (MQ=255)
  cgCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGtt                                                                                           <  2:6385982/93‑1 (MQ=255)
   gCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTa                                                                                          >  1:3041996/1‑93 (MQ=255)
    cTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTaa                                                                                         <  2:5264350/93‑1 (MQ=255)
    cTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTaa                                                                                         >  2:6066567/1‑93 (MQ=255)
         gCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGa                                                                                    >  2:538680/1‑93 (MQ=255)
           aGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGAcc                                                                                  >  2:5670431/1‑93 (MQ=255)
           aGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGAcc                                                                                  <  1:1757858/93‑1 (MQ=255)
           aGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGAcc                                                                                  >  2:6559406/1‑93 (MQ=255)
             aaaGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAg                                                                                >  1:4480197/1‑93 (MQ=255)
             aaaGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAg                                                                                <  1:3584764/93‑1 (MQ=255)
              aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGt                                                                               >  1:1696885/1‑93 (MQ=255)
              aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGt                                                                               >  1:2167468/1‑93 (MQ=255)
              aaGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGt                                                                               >  1:5178516/1‑93 (MQ=255)
                gCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTc                                                                             >  2:3100053/1‑93 (MQ=255)
                gCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTc                                                                             <  1:6611738/93‑1 (MQ=255)
                 cGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTTATTTGACGAGTTCg                                                                            >  1:4549008/1‑93 (MQ=255)
                 cGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCg                                                                            >  1:4633765/1‑93 (MQ=255)
                  gAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGc                                                                           >  1:3886974/1‑93 (MQ=255)
                   aaaaaaCTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCa                                                                          <  2:5151499/93‑1 (MQ=255)
                   aaaaaaCTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCa                                                                          >  2:3964923/1‑93 (MQ=255)
                      aagatGAAGAAAAATTGCAACGTCCCGTGGGGGCGGTTGTCATATGGAGTACAGTATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAAtt                                                                       <  1:2516843/89‑1 (MQ=255)
                      aaaCTGAAGAATAAATTCACCCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAAtt                                                                       <  1:3694217/93‑1 (MQ=255)
                      aaaCTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAAtt                                                                       <  2:246594/93‑1 (MQ=255)
                       aaCTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAAttt                                                                      <  2:4516130/93‑1 (MQ=255)
                        aCTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTg                                                                     >  2:2386947/1‑93 (MQ=255)
                         cTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGc                                                                    >  2:4022019/1‑93 (MQ=255)
                         cTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGc                                                                    <  2:618931/93‑1 (MQ=255)
                          tGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCg                                                                   >  2:2621902/1‑93 (MQ=255)
                             agaaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGaaa                                                                <  2:1690526/93‑1 (MQ=255)
                             agaaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGaaa                                                                >  1:6424652/1‑93 (MQ=255)
                             agaaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGCTCGCAATTTGCGaaa                                                                >  2:2216077/1‑93 (MQ=255)
                              gaagaaATTCAACCGCCCGTCGGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAg                                                               <  2:2732985/93‑1 (MQ=255)
                              gaaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAg                                                               >  2:1124843/1‑93 (MQ=255)
                              gaaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAg                                                               >  1:6034817/1‑93 (MQ=255)
                               aaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGa                                                              >  2:5932860/1‑93 (MQ=255)
                               aaTAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGa                                                              >  2:5472508/1‑93 (MQ=255)
                                 aaaaTCCACCCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGAcc                                                            <  1:1205499/92‑1 (MQ=255)
                                    aTTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtg                                                         >  1:3768146/1‑93 (MQ=255)
                                     ttCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtga                                                        >  1:5526542/1‑93 (MQ=255)
                                     ttCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtga                                                        >  2:4440274/1‑93 (MQ=255)
                                      tCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtgat                                                       >  1:4817421/1‑93 (MQ=255)
                                       cAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtgatg                                                      <  1:5461410/93‑1 (MQ=255)
                                       cAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtgatg                                                      >  2:3930942/1‑93 (MQ=255)
                                       cAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGtgatg                                                      >  1:3978940/1‑93 (MQ=255)
                                           cGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgt                                                  >  2:4324687/1‑93 (MQ=255)
                                           cGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgt                                                  >  1:1588625/1‑93 (MQ=255)
                                            gCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgtt                                                 <  1:6113499/93‑1 (MQ=255)
                                            gCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgtt                                                 <  2:5866278/93‑1 (MQ=255)
                                            ccccGTGAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgtt                                                 <  1:3616029/92‑1 (MQ=255)
                                             cccGTCAGGGGGGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgtt                                                 <  1:1195272/93‑1 (MQ=255)
                                             cccGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgttg                                                >  1:2383987/1‑93 (MQ=255)
                                              ccGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgttgt                                               >  2:4649546/1‑93 (MQ=255)
                                              ccGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGAtgttgt                                               >  1:1959950/1‑93 (MQ=255)
                                                gTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAg                                             <  2:5585796/93‑1 (MQ=255)
                                                 tCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGc                                            <  2:4994193/93‑1 (MQ=255)
                                                 tCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGc                                            >  2:1928920/1‑93 (MQ=255)
                                                 tCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGc                                            >  1:4028268/1‑93 (MQ=255)
                                                  cAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCg                                           <  1:4668341/93‑1 (MQ=255)
                                                   aGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGt                                          >  1:2666464/1‑93 (MQ=255)
                                                   aGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGt                                          >  2:1829999/1‑93 (MQ=255)
                                                   aGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGt                                          >  1:212909/1‑93 (MQ=255)
                                                   aGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGt                                          >  2:3764979/1‑93 (MQ=255)
                                                     gggCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTg                                         >  1:813465/1‑93 (MQ=255)
                                                      ggCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTgc                                        >  2:34027/1‑93 (MQ=255)
                                                          gTTGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCtt                                    >  1:1925556/1‑93 (MQ=255)
                                                          gTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCtt                                    >  1:953281/1‑93 (MQ=255)
                                                           ttGTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCttt                                   <  2:5351060/93‑1 (MQ=255)
                                                             gTCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTg                                 >  2:5423252/1‑93 (MQ=255)
                                                              tCATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGa                                >  1:6247757/1‑93 (MQ=255)
                                                               cATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGAc                               >  1:3520849/1‑93 (MQ=255)
                                                               cATATGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGAc                               >  1:860896/1‑93 (MQ=255)
                                                                 tatGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGAcgc                             <  1:5390563/93‑1 (MQ=255)
                                                                 tatGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGAcgc                             <  1:2846920/93‑1 (MQ=255)
                                                                  atGGAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGAcgcg                            <  2:3817690/93‑1 (MQ=255)
                                                                    ggAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCggg                          >  1:5628888/1‑93 (MQ=255)
                                                                    ggAGTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCggg                          <  2:358045/93‑1 (MQ=255)
                                                                      aGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAg                        <  1:43033/93‑1 (MQ=255)
                                                                       gTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGt                       <  2:2641950/93‑1 (MQ=255)
                                                                       gTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGt                       <  2:4794321/93‑1 (MQ=255)
                                                                       gTACAGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGt                       <  2:2798987/93‑1 (MQ=255)
                                                                       gTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGt                       <  1:4118834/93‑1 (MQ=255)
                                                                        tACAGTATGTTGTATATCGGTGGTAATATGACCAGTTCGCAATTTGCGAAAGACCGTTATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGtt                      <  1:5707010/93‑1 (MQ=255)
                                                                           aGGATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAAt                   >  2:4192375/1‑93 (MQ=255)
                                                                            ggATGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATg                  <  2:1500319/93‑1 (MQ=255)
                                                                              aTGTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGGTAATggg                >  1:5916446/1‑93 (MQ=255)
                                                                                gTTTGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCt              >  1:315557/1‑93 (MQ=255)
                                                                                  ttGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATTGGCTAc            <  2:5749204/93‑1 (MQ=255)
                                                                                  ttGATATCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTAc            <  1:5797276/93‑1 (MQ=255)
                                                                                  ttGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTAc            <  2:1573515/93‑1 (MQ=255)
                                                                                  ttGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGCAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTAc            <  1:1475889/93‑1 (MQ=255)
                                                                                     atatCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACtca         <  1:1309208/93‑1 (MQ=255)
                                                                                     atatCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACtca         >  1:1012322/1‑93 (MQ=255)
                                                                                     atatCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACtca         <  1:5101765/93‑1 (MQ=255)
                                                                                      tatCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACtcat        >  2:890296/1‑93 (MQ=255)
                                                                                       atCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACtcatc       >  2:3218307/1‑93 (MQ=255)
                                                                                       atCGGTGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACtcatc       <  2:721475/93‑1 (MQ=255)
                                                                                            |                                                                                            
GACGCTGAAGCAGAAAGCGAAAAAACTGAAGAATAAATTCAACCGCCCGTCAGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGG  >  NC_000913/4021066‑4021249

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: