BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,156,159	A→G	T31A (ACG→GCG)	oxyR →	OxyR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,156,159	0	A	G	100.0%	948.4 / NA	259	T31A (ACG→GCG)	oxyR	OxyR
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (133/126); total (133/126)

Only 100 of 270 total aligned reads displayed.

ATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCG  >  NC_000913/4156069‑4156248

aTGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCg                                                                                         >  1:3920625/1‑93 (MQ=255)

  gAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCt                                                                                       >  2:5247173/1‑93 (MQ=255)

   aaTATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCtt                                                                                      <  2:1174114/93‑1 (MQ=255)

    atatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTa                                                                                     <  2:5012756/93‑1 (MQ=255)

    atatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTa                                                                                     <  2:5580640/93‑1 (MQ=255)

     tatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAg                                                                                    >  1:4498432/1‑93 (MQ=255)

     tatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAg                                                                                    <  1:5673644/93‑1 (MQ=255)

     tatTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAg                                                                                    >  2:3654335/1‑93 (MQ=255)

      atTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGc                                                                                   >  2:4412495/1‑93 (MQ=255)

      atTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGc                                                                                   >  1:1362491/1‑93 (MQ=255)

         cGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCggg                                                                                <  2:6566136/93‑1 (MQ=255)

          gTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGc                                                                               >  2:1286800/1‑93 (MQ=255)

            gATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCaa                                                                             >  2:1356497/1‑93 (MQ=255)

              tCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAt                                                                           >  2:5956649/1‑93 (MQ=255)

               cTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAAtt                                                                          <  2:5788741/93‑1 (MQ=255)

                ttGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTc                                                                         >  1:3739031/1‑93 (MQ=255)

                 tGAGTCCCTGGTGCCGTTGGCTGAACACCACCGTTTTGGGCGTGCGGCAGATTCCTGCCACGTTAGCTAGCCGGCGCTTAGGGGGCAAATTCg                                                                        <  1:961042/93‑1 (MQ=255)

                  gactACCTGGTGGCATTGGCTGAACACCGCCATTTGCGGCGTGCGGCAGATGCCTGCCACTTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGt                                                                       <  2:5674684/90‑1 (MQ=255)

                  gAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGt                                                                       >  2:6348305/1‑93 (MQ=255)

                  gAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGt                                                                       >  1:4046745/1‑93 (MQ=255)

                  gAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGt                                                                       >  1:1087971/1‑93 (MQ=255)

                   aGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTa                                                                      >  1:407348/1‑93 (MQ=255)

                    gTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTaa                                                                     <  1:2925307/93‑1 (MQ=255)

                      aCCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGTAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGc                                                                   >  2:4681463/1‑93 (MQ=255)

                      aCCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGc                                                                   <  2:2320771/93‑1 (MQ=255)

                       ccTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCt                                                                  <  2:4295230/93‑1 (MQ=255)

                        cTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTg                                                                 >  2:6213618/1‑93 (MQ=255)

                         tggtggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTgg                                                                <  1:2612461/93‑1 (MQ=255)

                           gtggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGaa                                                              >  1:1168763/1‑93 (MQ=255)

                             ggCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGa                                                            <  1:4582517/93‑1 (MQ=255)

                              gCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt                                                           <  2:2091986/93‑1 (MQ=255)

                              gCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt                                                           >  2:3004115/1‑93 (MQ=255)

                              gCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt                                                           <  1:2344186/93‑1 (MQ=255)

                              gCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGGTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGAt                                                           >  1:4772968/1‑93 (MQ=255)

                               cATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATg                                                          <  2:2006633/93‑1 (MQ=255)

                               cATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATg                                                          <  1:6533450/93‑1 (MQ=255)

                               cATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATg                                                          >  1:6284788/1‑93 (MQ=255)

                               cATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATg                                                          >  1:1792212/1‑93 (MQ=255)

                                aTTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGa                                                         >  2:5746940/1‑93 (MQ=255)

                                aTTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGa                                                         >  2:5455033/1‑93 (MQ=255)

                                 ttGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAg                                                        >  2:3691379/1‑93 (MQ=255)

                                  tGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGc                                                       >  1:3209732/1‑93 (MQ=255)

                                  tGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGCAAGCTGGAAGATGAGc                                                       >  2:674558/1‑93 (MQ=255)

                                   ggCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCt                                                      >  1:4399750/1‑93 (MQ=255)

                                    gCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTg                                                     >  2:5889408/1‑93 (MQ=255)

                                      tGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTggg                                                   >  1:1471660/1‑93 (MQ=255)

                                       gaccacCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGc                                                  <  1:3430966/90‑1 (MQ=255)

                                       gAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGGTGGAAGATGAGCTGGGc                                                  <  1:5272251/93‑1 (MQ=255)

                                       gAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGc                                                  >  2:3476088/1‑93 (MQ=255)

                                        aaCACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCg                                                 <  1:2803495/93‑1 (MQ=255)

                                          cacCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTg                                               >  2:5639510/1‑93 (MQ=255)

                                           acCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa                                              >  1:1889605/1‑93 (MQ=255)

                                           acCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa                                              >  1:6126512/1‑93 (MQ=255)

                                           acCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGACAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGa                                              >  1:1495883/1‑93 (MQ=255)

                                            ccGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGAt                                             <  2:903272/93‑1 (MQ=255)

                                            ccGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGAt                                             <  1:5229405/93‑1 (MQ=255)

                                               ccATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGtt                                          >  2:2610489/1‑93 (MQ=255)

                                                 aTTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGc                                        <  1:4655167/93‑1 (MQ=255)

                                                 aTTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGc                                        >  1:5056553/1‑93 (MQ=255)

                                                 aTTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGc                                        <  2:4855253/93‑1 (MQ=255)

                                                  ttttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCt                                       <  1:4364150/93‑1 (MQ=255)

                                                  ttttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCt                                       >  1:5411334/1‑93 (MQ=255)

                                                  ttttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCt                                       <  1:640192/93‑1 (MQ=255)

                                                   tttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTg                                      <  2:6087332/93‑1 (MQ=255)

                                                   tttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTg                                      >  2:809597/1‑93 (MQ=255)

                                                    ttCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTgg                                     >  1:3817377/1‑93 (MQ=255)

                                                        gCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCg                                 <  1:4988608/93‑1 (MQ=255)

                                                        gCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCg                                 >  2:3972688/1‑93 (MQ=255)

                                                            gCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAcc                             <  1:742141/93‑1 (MQ=255)

                                                            gCGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAcc                             <  1:2738873/93‑1 (MQ=255)

                                                            gCGGCAGATACCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGAcc                             <  2:4150669/93‑1 (MQ=255)

                                                             gggCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCa                            <  1:6348829/92‑1 (MQ=255)

                                                             cGGCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCa                            <  1:4169908/93‑1 (MQ=255)

                                                              ggCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAg                           >  1:5112406/1‑93 (MQ=255)

                                                               gCAGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGc                          >  1:2217165/1‑93 (MQ=255)

                                                                 aGATTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCg                        >  2:5090653/1‑93 (MQ=255)

                                                                   aTTCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGGTGAGCTGGGCGTGATGTTGCTGTGGGGGAGCAGCCGTa                      >  1:2431838/1‑93 (MQ=255)

                                                                    ttCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTaa                     >  2:3236399/1‑93 (MQ=255)

                                                                    ttCCTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTaa                     >  2:5992163/1‑93 (MQ=255)

                                                                      ccTGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAg                   >  2:3447779/1‑93 (MQ=255)

                                                                        tGCCACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAgtg                 >  1:3560514/1‑93 (MQ=255)

                                                                          ccACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgtt               >  1:3326675/1‑93 (MQ=255)

                                                                          ccACGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgtt               >  2:2489819/1‑93 (MQ=255)

                                                                            aCGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgttgt             <  2:29169/93‑1 (MQ=255)

                                                                            aCGTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGtgttgt             <  1:3662610/93‑1 (MQ=255)

                                                                              gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           <  1:2458902/93‑1 (MQ=255)

                                                                              gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           <  1:5478456/93‑1 (MQ=255)

                                                                              gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           >  2:1663065/1‑93 (MQ=255)

                                                                              gTTAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTc           >  2:593769/1‑93 (MQ=255)

                                                                               ttAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCa          >  1:6041524/1‑93 (MQ=255)

                                                                                tAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCAc         >  2:333838/1‑93 (MQ=255)

                                                                                tAGCCAGCCGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGCAAAGTGTTGTTCAc         >  2:769337/1‑93 (MQ=255)

                                                                                  gccagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCAccc       <  2:5298918/93‑1 (MQ=255)

                                                                                  gccagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCAccc       <  2:4076169/93‑1 (MQ=255)

                                                                                   ccagccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCa      >  2:2699933/1‑93 (MQ=255)

                                                                                     agccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAgg    >  1:3418824/1‑93 (MQ=255)

                                                                                     agccGGCGCTTAGCGGGCAAATGCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAgg    <  1:2006649/93‑1 (MQ=255)

                                                                                      gccGGCGCTTAGCGGGCAGATTCATAAGCTGGAAGATGAGCTGGGGGTAATGTTGCTGGAGCGAACCAGCCGTAAAGTGTTGTTCACCCAGGc   <  1:3525113/93‑1 (MQ=255)

                                                                                      gccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGGGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGc   >  2:4508971/1‑93 (MQ=255)

                                                                                      gccGGCGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGc   <  2:1824534/93‑1 (MQ=255)

ATGAATATTCGTGATCTTGAGTACCTGGTGGCATTGGCTGAACACCGCCATTTTCGGCGTGCGGCAGATTCCTGCCACGTTAGCCAGCCGACGCTTAGCGGGCAAATTCGTAAGCTGGAAGATGAGCTGGGCGTGATGTTGCTGGAGCGGACCAGCCGTAAAGTGTTGTTCACCCAGGCG  >  NC_000913/4156069‑4156248

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`