Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,429,526 C→T A12A (GCG→GCA ytfE ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,429,5260CT99.7% 1124.6 / NA 295A12A (GCG→GCAytfEhypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (130/164);  minor base G (1/0);  total (131/164)
Fisher's exact test for biased strand distribution p-value = 4.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 303 total aligned reads displayed.

TGCCGCCGCGCGCGCCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGCGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCTTTAAGG  >  NC_000913/4429436‑4429615
                                                                                          |                                                                                         
tGCCGCCGCGCGCGCCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAgtgc                                                                                         <  1:5464200/93‑1 (MQ=255)
  ccgccgCGCGCGCCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCa                                                                                       >  2:5644421/1‑93 (MQ=255)
    gccgcGCGCGCCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGt                                                                                     <  1:1030612/93‑1 (MQ=255)
    cccgcGCGCGCCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGt                                                                                     <  2:1196290/92‑1 (MQ=255)
       gcgcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCa                                                                                  <  2:6171475/93‑1 (MQ=255)
       gcgcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCa                                                                                  >  2:1514438/1‑93 (MQ=255)
       gcgcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCa                                                                                  >  1:4438941/1‑93 (MQ=255)
        cgcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCAc                                                                                 <  1:6553140/93‑1 (MQ=255)
         gcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCAcc                                                                                <  2:5833693/93‑1 (MQ=255)
         gcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCAcc                                                                                >  2:3422109/1‑93 (MQ=255)
         gcgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCAcc                                                                                <  2:2502450/93‑1 (MQ=255)
          cgcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCt                                                                               >  1:5716104/1‑93 (MQ=255)
           gcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTa                                                                              >  2:662763/1‑93 (MQ=255)
           gcgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTa                                                                              <  2:465097/93‑1 (MQ=255)
            cgcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTaa                                                                             >  1:1174230/1‑93 (MQ=255)
             gcCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTaaa                                                                            <  1:2373657/93‑1 (MQ=255)
              ccAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAg                                                                           >  2:1883646/1‑93 (MQ=255)
               cAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAgg                                                                          >  1:4260839/1‑93 (MQ=255)
                aGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGt                                                                         >  1:1788392/1‑93 (MQ=255)
                 gCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGtt                                                                        <  1:3245515/93‑1 (MQ=255)
                 gCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGtt                                                                        >  2:2060131/1‑93 (MQ=255)
                 gCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGtt                                                                        <  2:508298/93‑1 (MQ=255)
                 gCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGtt                                                                        >  1:3136563/1‑93 (MQ=255)
                 gCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGtt                                                                        <  1:804644/93‑1 (MQ=255)
                  cGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAGGGTTg                                                                       <  1:4205987/93‑1 (MQ=255)
                   gTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTgg                                                                      >  1:3571670/1‑93 (MQ=255)
                      tGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTcg                                                                   <  1:3255496/93‑1 (MQ=255)
                      tGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTcg                                                                   >  1:5400422/1‑93 (MQ=255)
                       gCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTcgc                                                                  >  2:142899/1‑93 (MQ=255)
                       gCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTcgc                                                                  >  2:2223163/1‑93 (MQ=255)
                          tACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGAt                                                               <  1:2749883/93‑1 (MQ=255)
                            ccGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATaa                                                             <  2:614637/93‑1 (MQ=255)
                                 acaGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCAt                                                        <  2:6114969/93‑1 (MQ=255)
                                  cagcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATa                                                       <  1:4062283/93‑1 (MQ=255)
                                  cagcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATa                                                       <  2:2623841/93‑1 (MQ=255)
                                  cagcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATa                                                       >  1:5739790/1‑93 (MQ=255)
                                   agcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATCAGCCATAg                                                      >  2:1802094/1‑93 (MQ=255)
                                   agcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAg                                                      <  2:5355054/93‑1 (MQ=255)
                                   agcagTAATCCATATCATACTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAg                                                      >  1:6500138/1‑93 (MQ=255)
                                    gcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGc                                                     <  2:3324609/93‑1 (MQ=255)
                                    gcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGc                                                     <  1:5118794/93‑1 (MQ=255)
                                    gcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGc                                                     >  2:1622789/1‑93 (MQ=255)
                                    gcagTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGc                                                     <  2:3542280/93‑1 (MQ=255)
                                     cagTAATCCATATCATATCTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCt                                                    <  2:3648303/93‑1 (MQ=255)
                                        tAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGAt                                                 <  1:1434317/93‑1 (MQ=255)
                                         aaTCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATa                                                <  2:1931771/93‑1 (MQ=255)
                                          aTCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATAc                                               >  1:2291064/1‑93 (MQ=255)
                                           tCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATAcc                                              >  2:4912219/1‑93 (MQ=255)
                                            ccATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCt                                             <  1:1270579/93‑1 (MQ=255)
                                            ccATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCt                                             <  1:3429853/93‑1 (MQ=255)
                                             catatcatatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTc                                            >  1:2222803/1‑93 (MQ=255)
                                              atatcatatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCa                                           >  2:5918417/1‑93 (MQ=255)
                                              atatcatatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCa                                           <  2:386387/93‑1 (MQ=255)
                                               tatcatatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCAt                                          >  1:3801340/1‑93 (MQ=255)
                                                 tcatatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTc                                        >  1:3893787/1‑93 (MQ=255)
                                                 tcatatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTc                                        >  2:3022431/1‑93 (MQ=255)
                                                  catatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCt                                       >  1:6205339/1‑93 (MQ=255)
                                                  catatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCt                                       >  1:3361019/1‑93 (MQ=255)
                                                   atatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCtt                                      >  1:6348673/1‑93 (MQ=255)
                                                   atatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCtt                                      >  1:588235/1‑93 (MQ=255)
                                                    tatTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTta                                     <  2:808176/93‑1 (MQ=255)
                                                     atTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTtaa                                    <  1:6087880/93‑1 (MQ=255)
                                                       ttACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTtaata                                  <  2:6025120/93‑1 (MQ=255)
                                                        tACGAAACAGAGCTGAAGCGCGAGCAATAGAGAGTGCCAGTTCCCCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTtaataa                                 <  2:6551636/93‑1 (MQ=255)
                                                         aCGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataag                                <  2:3362332/93‑1 (MQ=255)
                                                         aCGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataag                                <  2:5589989/93‑1 (MQ=255)
                                                          cGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataaga                               <  2:5690026/93‑1 (MQ=255)
                                                          cGAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataaga                               <  1:3205222/93‑1 (MQ=255)
                                                           gAAACAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataagat                              <  2:1307497/93‑1 (MQ=255)
                                                            aaaCAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataagata                             <  1:2914306/93‑1 (MQ=255)
                                                             aaCAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataagataa                            <  1:2135314/93‑1 (MQ=255)
                                                             aaCAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataagataa                            <  2:5456184/93‑1 (MQ=255)
                                                              aCAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataagataag                           >  2:4110544/1‑93 (MQ=255)
                                                              aCAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAataagataag                           <  1:3739679/93‑1 (MQ=255)
                                                               cAGAGCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAAtaagataaga                          <  2:308560/93‑1 (MQ=255)
                                                                agagCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATaagataagat                         <  1:602826/93‑1 (MQ=255)
                                                                 gagCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATg                        >  1:4646175/1‑93 (MQ=255)
                                                                 gagCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATg                        >  1:6385252/1‑93 (MQ=255)
                                                                 gagCTGAAGCGCGAGAAATAGAGAGTGCCACTTCACCTAAAGGTGGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATg                        <  1:201298/93‑1 (MQ=255)
                                                                  agCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGt                       <  1:5240283/93‑1 (MQ=255)
                                                                  agCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGt                       >  2:511272/1‑93 (MQ=255)
                                                                   gCTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTa                      <  2:2276321/93‑1 (MQ=255)
                                                                    cTGAAGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTAt                     <  1:5327259/93‑1 (MQ=255)
                                                                       aaGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTAtttt                  <  1:4704865/93‑1 (MQ=255)
                                                                        aGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTa                 >  2:4807367/1‑93 (MQ=255)
                                                                        aGCGCGAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTa                 <  2:3203742/93‑1 (MQ=255)
                                                                          cgcgAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTaaa               <  2:4683539/93‑1 (MQ=255)
                                                                          cgcgAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTaaa               <  1:5585812/93‑1 (MQ=255)
                                                                             gAGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGc            <  1:1980161/93‑1 (MQ=255)
                                                                              aGGAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCa           >  2:5476052/1‑93 (MQ=255)
                                                                               ggAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCAt          >  2:4376535/1‑93 (MQ=255)
                                                                                gAATAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATc         <  2:3974130/93‑1 (MQ=255)
                                                                                 aaTAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCt        <  2:4269195/93‑1 (MQ=255)
                                                                                 aaTAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCt        <  2:6239062/93‑1 (MQ=255)
                                                                                  aTAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCtt       <  1:2490645/93‑1 (MQ=255)
                                                                                   tAGAGAGTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCttt      <  1:885656/93‑1 (MQ=255)
                                                                                    agagagTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCTTTa     >  1:729141/1‑93 (MQ=255)
                                                                                     gagagTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCTTTaa    >  1:4864181/1‑93 (MQ=255)
                                                                                      agagTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCTTTAAg   <  2:3915506/93‑1 (MQ=255)
                                                                                       gagTGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCTTTAAgg  <  2:552857/93‑1 (MQ=255)
                                                                                          |                                                                                         
TGCCGCCGCGCGCGCCAGCGTCTGCTTACCGCCACAGCAGTAATCCATATCATATTTACGAAACAGAGCTGAAGCGCGAGGAATAGAGAGCGCCAGTTCACCTAAAGGTTGGTCGCGATAAGCCATAGCTGATACCTCATTCTTAATAAGATAAGATGTATTTTAAATGCATCTTTAAGG  >  NC_000913/4429436‑4429615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: