Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 4,629,559 | T→C | Y420H (TAC→CAC) | slt → | soluble lytic murein transglycosylase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,629,559 | 0 | T | C | 84.8% | 675.0 / 101.5 | 263 | Y420H (TAC→CAC) | slt | soluble lytic murein transglycosylase |
Reads supporting (aligned to +/- strand): ref base T (19/21); new base C (107/116); total (126/137) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.08e-01 |
Only 100 of 266 total aligned reads displayed.
AAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTAT > NC_000913/4629467‑4629648 | gTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCTAGTTGATGTACTg > 1:463762/1‑93 (MQ=255) gTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTg < 1:5008990/93‑1 (MQ=255) tATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTgg > 1:3301752/1‑93 (MQ=255) aTGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTGAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGa < 2:3561616/93‑1 (MQ=255) aTGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGa < 2:3286927/93‑1 (MQ=255) tGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGaa > 2:624187/1‑93 (MQ=255) gCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAAtct > 2:4714005/1‑93 (MQ=255) cTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAAtctc < 2:4536540/93‑1 (MQ=255) tGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCg > 2:4094430/1‑93 (MQ=255) tGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGCCGCGCGGGCGCGAGTTGATGCACTGTAATCTCg > 2:2562182/1‑93 (MQ=255) aaGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGat > 1:2993303/1‑93 (MQ=255) aGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGata > 1:3199233/1‑93 (MQ=255) gATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGataa > 1:5739248/1‑93 (MQ=255) gATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataa > 2:3079291/1‑93 (MQ=255) gATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataa > 1:5875425/1‑93 (MQ=255) aTTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataat < 1:4125527/93‑1 (MQ=255) aTTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataat < 2:6527305/93‑1 (MQ=255) aTTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataat < 2:1375754/93‑1 (MQ=255) aTTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataat > 1:3337826/1‑93 (MQ=255) ttGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGTCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataata < 1:529957/93‑1 (MQ=255) ttGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGataata > 2:5504433/1‑93 (MQ=255) tGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATAc < 1:5418101/93‑1 (MQ=255) tGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATAc < 1:1370946/93‑1 (MQ=255) gATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATAcc < 2:5808467/93‑1 (MQ=255) tAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACcgc > 2:5107168/1‑93 (MQ=255) tAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACcgc > 1:2494988/1‑93 (MQ=255) tAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACcgc < 1:6632467/93‑1 (MQ=255) aaaGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACcgcg > 1:6261203/1‑93 (MQ=255) aaGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACcgcgc > 1:1057452/1‑93 (MQ=255) aGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACcgcgcg > 1:6049977/1‑93 (MQ=255) gcgcCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGt > 1:196740/1‑93 (MQ=255) gccgcAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGGGATGGCGCGCGTGCGCGAGTTGATGCACTGGCATCTCGATAATACCGCGCGCAg > 1:5591010/1‑93 (MQ=255) gccgcAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAg < 2:2899252/93‑1 (MQ=255) gccgcAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAg < 2:5929203/93‑1 (MQ=255) gccgcAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAg < 2:2992248/93‑1 (MQ=255) ccgcAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGc > 2:752471/1‑93 (MQ=255) cgcAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCg > 2:3813391/1‑93 (MQ=255) cAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAg < 1:1707951/93‑1 (MQ=255) aGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGt < 1:4693870/93‑1 (MQ=255) aGAATGTTGACAGCGCCCTGACTCAGGGAGCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGt > 1:3226753/1‑93 (MQ=255) gAATGTTGCCAGCGCCCTGAATCGGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTg < 1:3910842/93‑1 (MQ=255) gAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTg < 2:1608058/93‑1 (MQ=255) aaTGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTgg < 2:5147157/93‑1 (MQ=255) aaTGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTgg > 1:5784386/1‑93 (MQ=255) tGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGc < 2:4957401/93‑1 (MQ=255) gTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGcc < 1:5363033/93‑1 (MQ=255) gTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGcc > 1:3653149/1‑93 (MQ=255) tGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGCGGGCCaa < 2:2954536/93‑1 (MQ=255) gACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAAt < 1:3721553/93‑1 (MQ=255) aCAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATc < 2:64408/93‑1 (MQ=255) aCAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATc < 2:2647852/93‑1 (MQ=255) cAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCt < 1:491257/93‑1 (MQ=255) aGCGCGCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTg < 2:5597582/93‑1 (MQ=255) gcgcCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTgg < 2:5306958/93‑1 (MQ=255) gcgcCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTgg > 2:3198599/1‑93 (MQ=255) gcgcCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTgg < 2:4838551/93‑1 (MQ=255) cccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGa > 2:4660208/1‑93 (MQ=255) cccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGa > 2:4943500/1‑93 (MQ=255) cccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGa > 2:2139186/1‑93 (MQ=255) cccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGa > 1:3550327/1‑93 (MQ=255) cccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGa > 1:4391040/1‑93 (MQ=255) ccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGaa > 2:3737292/1‑93 (MQ=255) ccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGaa > 2:3389861/1‑93 (MQ=255) ccTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGaa > 2:5962738/1‑93 (MQ=255) cTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAag > 1:2095364/1‑93 (MQ=255) cTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAag < 2:4253856/93‑1 (MQ=255) tGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAaga < 2:5362457/93‑1 (MQ=255) tGAATCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAaga > 1:1952151/1‑93 (MQ=255) gACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAagag > 1:1289434/1‑93 (MQ=255) gACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAagag > 1:2400844/1‑93 (MQ=255) cTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCa > 1:1365131/1‑93 (MQ=255) tCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCaa < 1:2811374/93‑1 (MQ=255) aGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGt > 1:3618203/1‑93 (MQ=255) ggggCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATCCCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCa < 1:5904614/93‑1 (MQ=255) ggCCGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCaa > 1:6383989/1‑93 (MQ=255) gCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCaaa > 1:2726632/1‑93 (MQ=255) cGGAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCaaaaa < 2:3890152/93‑1 (MQ=255) ggAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAAc < 2:4148727/93‑1 (MQ=255) ggAGATGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAAc > 1:6216312/1‑93 (MQ=255) agaTGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACag > 1:3988432/1‑93 (MQ=255) gaTGGCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACaga < 1:1515207/93‑1 (MQ=255) ggCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCa < 2:1156229/93‑1 (MQ=255) ggCGCGCGTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCa < 1:5620639/93‑1 (MQ=255) cgcgcgTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAgg > 2:4454941/1‑93 (MQ=255) cgTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCa < 2:3963366/93‑1 (MQ=255) cgTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCa < 2:1263426/93‑1 (MQ=255) gTGCGCGAGTTGATGCACTGGAGTCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCaa < 2:6650384/93‑1 (MQ=255) gTGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCaa < 1:6333779/93‑1 (MQ=255) tGCGCGAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAAc > 1:5231033/1‑93 (MQ=255) gcgAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTgg > 1:3116392/1‑93 (MQ=255) gcgAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTgg < 1:2673501/93‑1 (MQ=255) cgAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGgc > 1:1668771/1‑93 (MQ=255) gAGTTGATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGgcg > 2:1865293/1‑93 (MQ=255) aGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGgcgc < 1:4750778/93‑1 (MQ=255) gATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTa < 1:929939/93‑1 (MQ=255) gATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCACAAACAGAGCAGGCTCAACTGGCGCGGTa > 2:2627594/1‑93 (MQ=255) gATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTa < 1:3836383/93‑1 (MQ=255) gATGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTa < 1:1139103/93‑1 (MQ=255) aTGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGtgt < 1:3465337/93‑3 (MQ=255) aTGCACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTAt < 2:6256120/93‑1 (MQ=255) | AAGAGTATGAGCTGAAGATTGATAAAGCGCCGCAGAATGTTGACAGCGCCCTGACTCAGGGGCCGGAGATGGCGCGCGTGCGCGAGTTGATGTACTGGAATCTCGATAATACCGCGCGTAGCGAGTGGGCCAATCTGGTGAAGAGCAAGTCAAAAACAGAGCAGGCTCAACTGGCGCGGTAT > NC_000913/4629467‑4629648 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |