Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,573,190 Δ1 bp coding (1487/1542 nt) yjiU → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,573,1890G.99.6% 2319.1 / ‑0.0 488coding (1486/1542 nt)yjiUhypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base . (256/228);  total (259/229)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01

Only 100 of 531 total aligned reads displayed.

ATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA  >  NC_000913/4573094‑4573281
                                                                                               |                                                                                            
atatTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAg                                                                                              >  2:11474427/1‑96 (MQ=255)
 tattatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCGGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                             >  2:3943987/1‑95 (MQ=255)
 tattatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                             <  2:8687433/96‑2 (MQ=255)
 tattatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAga                                                                                             <  2:6049259/96‑2 (MQ=255)
  attatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag                                                                                            <  2:9282856/96‑3 (MQ=255)
  attatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag                                                                                            >  2:1303283/1‑94 (MQ=255)
  attatCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAgag                                                                                            <  1:6343684/96‑3 (MQ=255)
      tCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCata                                                                                       <  1:11195147/96‑1 (MQ=255)
         aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGTCCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGa                                                                                    <  1:4615634/96‑1 (MQ=255)
         aTACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGa                                                                                    <  2:3526242/96‑1 (MQ=255)
          tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc                                                                                   >  2:3711370/1‑96 (MQ=255)
          tACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGAc                                                                                   <  1:13735583/96‑1 (MQ=255)
           aCATGGCTTAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACt                                                                                  >  1:12980970/1‑96 (MQ=255)
            cATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACtt                                                                                 <  1:13232988/96‑1 (MQ=255)
             attgCTGAAAGAAGCATGGTCCCAACTTACCGGACCTCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttt                                                                                <  2:2323604/93‑1 (MQ=255)
             aTGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACttt                                                                                <  2:4722686/96‑1 (MQ=255)
              tGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACtttt                                                                               <  2:121424/96‑1 (MQ=255)
                  tGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCtt                                                                           >  2:4496478/1‑96 (MQ=255)
                   gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCttt                                                                          <  2:8079764/96‑1 (MQ=255)
                   gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCttt                                                                          >  1:6479078/1‑96 (MQ=255)
                   gAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCttt                                                                          <  2:10619245/96‑1 (MQ=255)
                      agaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAt                                                                       <  1:10005313/96‑1 (MQ=255)
                      agaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAAt                                                                       <  2:2662020/96‑1 (MQ=255)
                       gaagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc                                                                      <  1:5838893/96‑1 (MQ=255)
                       gaagCATGGGCCCAACTTACCGGACCCCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc                                                                      <  2:13743635/96‑1 (MQ=255)
                       aaagTATGGGCCCAAATTAACGGACCGGTTGCAGTTCTGAAACCCGAAGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATc                                                                      <  2:7303752/95‑1 (MQ=255)
                        aagCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCa                                                                     >  1:404099/1‑96 (MQ=255)
                         agCATGGGCCCAACTTACCGGACCGCTTGCGGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAGA‑GAGCATATGACTTTTTCTTTAATCAc                                                                    >  2:13597521/1‑96 (MQ=255)
                         agCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAc                                                                    >  2:1605914/1‑96 (MQ=255)
                          gCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACg                                                                   <  2:7552453/96‑1 (MQ=255)
                           cATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACgg                                                                  <  2:5685081/96‑1 (MQ=255)
                            aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGa                                                                 >  2:12593711/1‑96 (MQ=255)
                            aTGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGa                                                                 >  1:7973707/1‑96 (MQ=255)
                              gggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTCTTTCTTTAATCACTGATg                                                               <  1:12613334/96‑1 (MQ=255)
                               ggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGc                                                              <  1:2192549/96‑1 (MQ=255)
                               ggCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGc                                                              <  1:6736769/96‑1 (MQ=255)
                                gCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGcc                                                             >  2:12807881/1‑96 (MQ=255)
                                 cccAACTTCGCGGACCGCTTGCAGTACTGAACCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCt                                                            <  1:5004956/96‑1 (MQ=255)
                                 cccAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCt                                                            >  1:1596041/1‑96 (MQ=255)
                                   caccTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTgg                                                          <  1:309483/93‑1 (MQ=255)
                                     aCTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGAt                                                        >  1:13319422/1‑96 (MQ=255)
                                           cGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGccc                                                  <  1:2647906/96‑1 (MQ=255)
                                            ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCg                                                 >  2:8297421/1‑96 (MQ=255)
                                            ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCg                                                 >  2:11074884/1‑96 (MQ=255)
                                            ggACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCg                                                 <  1:8398392/96‑1 (MQ=255)
                                             gACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGTCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCgg                                                <  1:7586304/96‑1 (MQ=255)
                                              tccGGTTGCAGTACTGGAACCCTGTGTCAAACGTTTTTATTTACC‑AAAAGAGCATTTGGCTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGt                                               <  1:10772409/95‑1 (MQ=255)
                                               ccGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTa                                              <  1:9099785/96‑1 (MQ=255)
                                                 gCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAc                                            >  2:6638050/1‑96 (MQ=255)
                                                  cTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAAcc                                           >  1:10992786/1‑96 (MQ=255)
                                                   ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                          >  2:2806871/1‑96 (MQ=255)
                                                   ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                          >  1:14244966/1‑96 (MQ=255)
                                                   ttGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCa                                          <  2:971886/96‑1 (MQ=255)
                                                    tacAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GTGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCaa                                         >  1:10562842/3‑96 (MQ=255)
                                                    tGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCaa                                         >  1:5642410/1‑96 (MQ=255)
                                                      cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa                                       <  1:13490111/96‑1 (MQ=255)
                                                      cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa                                       <  2:6373371/96‑1 (MQ=255)
                                                      cAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATa                                       >  2:12316988/1‑96 (MQ=255)
                                                       aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCAGGGATGCCTGGATTTGCCCGGTAAGcaacaa                                      >  2:14107578/1‑96 (MQ=255)
                                                       aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaa                                      >  2:500850/1‑96 (MQ=255)
                                                       aGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATaa                                      >  1:8980134/1‑96 (MQ=255)
                                                          aCTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAAt                                   >  2:7149356/1‑96 (MQ=255)
                                                           cTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATc                                  <  1:4325150/96‑1 (MQ=255)
                                                           cTGAAACCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATc                                  <  2:13297590/96‑1 (MQ=255)
                                                              aaaCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTg                               >  2:11912850/1‑96 (MQ=255)
                                                               aaCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                              <  2:10451613/96‑1 (MQ=255)
                                                               aaCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                              >  1:14064360/1‑96 (MQ=255)
                                                               aaCCCGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTgg                              >  2:5843021/1‑96 (MQ=255)
                                                                 cccGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAt                            >  1:3596257/1‑96 (MQ=255)
                                                                 cccGATGCCACCCGTTTTTATTTACCGAAA‑GAGCATACGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGAt                            <  1:996530/96‑1 (MQ=255)
                                                                  ccGATGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATa                           >  2:8907459/1‑96 (MQ=255)
                                                                    gATGGCAACCGTTTTTATTTTCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACg                         >  1:3251181/1‑96 (MQ=255)
                                                                      tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGc                       >  2:6899318/1‑96 (MQ=255)
                                                                      tGGCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGc                       >  1:5389943/1‑96 (MQ=255)
                                                                       ggCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCt                      >  1:11919962/1‑96 (MQ=255)
                                                                       ggCAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCt                      <  2:7766515/96‑1 (MQ=255)
                                                                         cAACCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCttt                    >  2:5392424/1‑96 (MQ=255)
                                                                           aCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa                  >  1:2349472/1‑96 (MQ=255)
                                                                           aCCGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTa                  <  1:2066752/96‑1 (MQ=255)
                                                                            ccGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaa                 <  2:11349882/96‑1 (MQ=255)
                                                                            ccGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTGTTaa                 >  1:10361059/1‑96 (MQ=255)
                                                                             cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa                <  2:2114793/96‑1 (MQ=255)
                                                                             cGTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTaaa                <  2:9066020/96‑1 (MQ=255)
                                                                              gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAg               <  1:11485826/96‑1 (MQ=255)
                                                                              gTTTTTATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAg               >  2:14376140/1‑96 (MQ=255)
                                                                                ttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGc             >  1:7883208/1‑96 (MQ=255)
                                                                                ttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGc             <  1:6047932/96‑1 (MQ=255)
                                                                                ttttATTTACCGAAA‑GAGCATATGACTTTTTCTTTAATAACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGc             >  2:10136538/1‑96 (MQ=255)
                                                                                 tttatttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCt            <  1:12463930/96‑1 (MQ=255)
                                                                                  ttatttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCtt           <  2:10871214/96‑1 (MQ=255)
                                                                                   tatttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATNCNGCTTTTAAAGGNTTa          >  1:2924820/1‑96 (MQ=255)
                                                                                   tatttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa          <  2:11733073/96‑1 (MQ=255)
                                                                                   tatttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa          >  1:7197215/1‑96 (MQ=255)
                                                                                   tatttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTa          >  1:4764566/1‑96 (MQ=255)
                                                                                    atttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa         <  1:7353910/96‑1 (MQ=255)
                                                                                    atttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTaa         <  2:3031333/96‑1 (MQ=255)
                                                                                     tttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAc        >  1:936599/1‑96 (MQ=255)
                                                                                      ttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAcc       <  2:6211636/96‑1 (MQ=255)
                                                                                      ttaCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAcc       >  1:859556/1‑96 (MQ=255)
                                                                                       taCCGAAA‑GAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAAccc      <  1:5229300/96‑1 (MQ=255)
                                                                                               |                                                                                            
ATATTATCAATACATGGCTGAAAGAAGCATGGGCCCAACTTACCGGACCGCTTGCAGTACTGAAACCCGATGGCAACCGTTTTTATTTACCGAAAGGAGCATATGACTTTTTCTTTAATCACGGATGCCTGGATTTGCCCGGTAACCAATAAAATCCTGGATACGGCTTTTAAAGGCTTAACCCCTTA  >  NC_000913/4573094‑4573281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑