Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,004,984 +CG coding (1516/1833 nt) recQ → ATP‑dependent DNA helicase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,004,9831.G99.7% 1171.4 / ‑4.6 315A505A (GCG→GCCrecQATP‑dependent DNA helicase
Reads supporting (aligned to +/- strand):  ref base . (0/1);  major base G (154/159);  minor base C (1/0);  total (155/160)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01
*NC_0009134,004,9832.C99.4% 1180.7 / ‑1.2 315coding (1515/1833 nt)recQATP‑dependent DNA helicase
Reads supporting (aligned to +/- strand):  ref base . (1/1);  new base C (153/159);  total (155/160)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.24e-01

Only 100 of 352 total aligned reads displayed.

GATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTCGCG‑‑G‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA  >  NC_000913/4004890‑4005063
                                                                                               ||                                                                                  
gaaccGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCCACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑g                                                                                   <  2:4575779/93‑1 (MQ=255)
gATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCACAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑g                                                                                   <  2:8833919/96‑1 (MQ=255)
 aTCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gc                                                                                  >  1:7951109/1‑95 (MQ=255)
 aTCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gc                                                                                  <  1:6428477/96‑2 (MQ=255)
    cGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcgaa                                                                               <  1:14416893/96‑5 (MQ=255)
    cGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcgaa                                                                               <  2:7088432/96‑5 (MQ=255)
    cGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcgaa                                                                               <  1:3193293/96‑5 (MQ=255)
    cGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCg‑‑gcgaa                                                                               <  2:4754194/96‑5 (MQ=255)
          cTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCctct                                                                         <  2:11963975/96‑1 (MQ=255)
           tGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCtt                                                                        >  1:8371746/1‑96 (MQ=255)
           tGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCtt                                                                        <  2:8203787/96‑1 (MQ=255)
           tGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACACAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCtt                                                                        >  1:334957/1‑96 (MQ=255)
            gATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCttt                                                                       <  2:2832797/96‑1 (MQ=255)
            gATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCttt                                                                       <  1:12485195/96‑1 (MQ=255)
             aTTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGCCAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTg                                                                      <  1:9383031/96‑1 (MQ=255)
             aTTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTg                                                                      >  1:1596545/1‑96 (MQ=255)
              ttCCCCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGc                                                                     <  2:10073924/96‑1 (MQ=255)
                cACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCaa                                                                   >  1:7426738/1‑96 (MQ=255)
                cACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCaa                                                                   <  2:9536657/96‑1 (MQ=255)
                  ccTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACt                                                                 >  2:13218443/1‑96 (MQ=255)
                   cTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACtt                                                                <  1:10008785/96‑1 (MQ=255)
                    tCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCTCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtg                                                               <  2:4326341/96‑1 (MQ=255)
                    tCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtg                                                               <  1:11986802/96‑1 (MQ=255)
                     cGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgc                                                              <  1:3501905/96‑1 (MQ=255)
                      ggCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgcc                                                             >  2:11180862/1‑96 (MQ=255)
                        ccTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgt                                                           >  2:8927133/1‑96 (MQ=255)
                         cTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtg                                                          >  1:1538234/1‑96 (MQ=255)
                         cTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtg                                                          >  2:3428147/1‑96 (MQ=255)
                         cTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTGTGCAACTtgccgtg                                                          >  1:4302023/1‑96 (MQ=255)
                         cTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCAGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtg                                                          <  1:5921082/96‑1 (MQ=255)
                          tGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtgc                                                         >  1:4243665/1‑96 (MQ=255)
                          tGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtgc                                                         >  2:10368132/1‑96 (MQ=255)
                          tGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGAGCTGCGCGGCG‑‑AATCCTCTTGGTAACTtgcctagc                                                         >  1:11236588/1‑92 (MQ=255)
                           ggTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACATAGGCCGCGCGCCCTGTGCTGCGCGGCG‑‑AATCCTCTTTGCTACTtgccgtgcc                                                        >  2:2332963/1‑96 (MQ=255)
                           ggTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtgcc                                                        >  1:1789320/1‑96 (MQ=255)
                           ggTGACCCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtgcc                                                        <  2:12949930/96‑1 (MQ=255)
                            ctGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTtgccgtgccg                                                       >  1:11372919/2‑96 (MQ=255)
                             tGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCcgc                                                      >  1:5669873/1‑96 (MQ=255)
                             tGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCcgc                                                      >  2:6650636/1‑96 (MQ=255)
                              gACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCcgcg                                                     <  1:6152463/96‑1 (MQ=255)
                              gACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCcgcg                                                     >  2:1511900/1‑96 (MQ=255)
                              gACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCcgcg                                                     >  2:3191359/1‑96 (MQ=255)
                                 gCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTAt                                                  >  2:2746233/1‑96 (MQ=255)
                                 gCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTAt                                                  <  1:927880/96‑1 (MQ=255)
                                 gCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGAGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTAt                                                  >  1:6954605/1‑96 (MQ=255)
                                  cAAAATATTGCCCAGCATGCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATc                                                 <  2:5111951/96‑1 (MQ=255)
                                   aaaaTATTGTCCAGCATTCTGCCCTACAACTGACAGAGGCCGCTCGCCCGGTCCTGCGCGGCG‑‑AATCCTTTTTGCAACTTGCCGTGCCGCGTATCg                                                <  2:11608448/96‑1 (MQ=255)
                                   aaaaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCg                                                >  2:9696238/1‑96 (MQ=255)
                                   aaaaTATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCg                                                >  1:1029567/1‑96 (MQ=255)
                                    aaaTATTGCCCAGCATTCTGCCCTACAACGGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATGCTCTTTGCAACTTGCCGTGCCTCGGATcct                                               >  1:3127587/1‑94 (MQ=255)
                                      atatTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTCCCGCGTATCGTgg                                             <  1:10945729/96‑1 (MQ=255)
                                       tatTGCCCAGCAGTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGgc                                            <  1:4619975/96‑1 (MQ=255)
                                        atTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGgcg                                           <  1:10457116/96‑1 (MQ=255)
                                          tGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCt                                         <  2:4905825/96‑1 (MQ=255)
                                               aGCATTCTTCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAAc                                    <  1:9728625/96‑1 (MQ=255)
                                                gCATTCTGCCCTACAGCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCAGCGTATCGTGGCGCTCAAAcc                                   >  2:13011411/1‑96 (MQ=255)
                                                 cATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCg                                  >  2:9454657/1‑96 (MQ=255)
                                                 cATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCg                                  <  2:13543723/96‑1 (MQ=255)
                                                  aTTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGa                                 >  2:5372313/1‑96 (MQ=255)
                                                  aTTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGa                                 >  2:3080180/1‑96 (MQ=255)
                                                  aTTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTGGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGa                                 >  1:11718777/1‑96 (MQ=255)
                                                   ttCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGaa                                <  1:4991394/96‑1 (MQ=255)
                                                    tCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGaaa                               >  2:12533260/1‑96 (MQ=255)
                                                    tCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGaaa                               >  2:8475983/1‑96 (MQ=255)
                                                      tGCCCTACAACTGTCAGAGGCCGCGGGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGc                             <  2:12315943/96‑1 (MQ=255)
                                                       gCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCg                            <  2:813248/96‑1 (MQ=255)
                                                         ccTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGAt                          >  1:13126613/1‑96 (MQ=255)
                                                         ccTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGAt                          >  1:223139/1‑96 (MQ=255)
                                                          cTACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATg                         >  1:8198698/1‑96 (MQ=255)
                                                           tACAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGc                        <  2:6877027/96‑1 (MQ=255)
                                                            agaaCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCTTATCGTGGCGCTCAAACCGAAAGCGATGCa                       >  1:12746060/3‑96 (MQ=255)
                                                            acctcTGACAGCGGCCGGGCGCCCGGTGCTGCCCT‑‑GCTAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCa                       <  1:6557710/92‑1 (MQ=255)
                                                            aCAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCa                       >  2:2535521/1‑96 (MQ=255)
                                                             cAACTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAg                      <  1:12238404/96‑1 (MQ=255)
                                                              aaCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCCCTCAAACCGAAAGCGATGCAGa                     <  2:9003639/96‑1 (MQ=255)
                                                               aCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaa                    >  1:1070435/1‑96 (MQ=255)
                                                               aCTGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaa                    >  2:9770059/1‑96 (MQ=255)
                                                                cTGGCAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGaaa                   <  2:6336190/96‑1 (MQ=255)
                                                                 tGACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCTTGGCGCTCAAACAGAAAGTGATGCAGAAAt                  >  1:2373118/1‑96 (MQ=255)
                                                                  gACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATc                 <  2:7627453/96‑1 (MQ=255)
                                                                  gACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATc                 <  2:7951109/96‑1 (MQ=255)
                                                                  gACAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATc                 <  1:3734984/96‑1 (MQ=255)
                                                                   aCAGAGGCGACGCGCCCGGTGCTGCGCG‑‑GCTAATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCg                <  1:9630478/96‑1 (MQ=255)
                                                                   aCAGAGGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCg                >  2:9289691/1‑96 (MQ=255)
                                                                     agagGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATTGtt              >  1:6738399/1‑96 (MQ=255)
                                                                     agagGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGtt              <  1:14132401/96‑1 (MQ=255)
                                                                     agagGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGtt              <  2:4164248/96‑1 (MQ=255)
                                                                      gagGCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTc             <  1:7543728/96‑1 (MQ=255)
                                                                        ggCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcgg           <  2:14255352/96‑1 (MQ=255)
                                                                         gCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcggc          <  2:3570227/96‑1 (MQ=255)
                                                                         gCCGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcggc          <  1:8563334/96‑1 (MQ=255)
                                                                          ccGCGCGCCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCATAAATCGTTcggct         <  1:13878588/96‑2 (MQ=255)
                                                                          ccGCGCGCCCAGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTcggcg         <  2:10740541/96‑1 (MQ=255)
                                                                            gcgcgcCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCggcggc       >  2:3818665/1‑96 (MQ=255)
                                                                             cgcgcCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGTCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCa      <  2:13853669/96‑1 (MQ=255)
                                                                              gcgcCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCaa     >  1:5209411/1‑96 (MQ=255)
                                                                               cgcCCGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAAc    <  2:1789320/96‑1 (MQ=255)
                                                                                 cccGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTa  >  2:1648261/1‑96 (MQ=255)
                                                                                 cccGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTa  <  2:11272839/96‑1 (MQ=255)
                                                                                 cccGGTGCTGCGCGGCG‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTa  >  1:2604301/1‑96 (MQ=255)
                                                                                               ||                                                                                  
GATCCGCCAGCTGATTCACCTCGGCCTGGTGACGCAAAATATTGCCCAGCATTCTGCCCTACAACTGACAGAGGCCGCGCGCCCGGTGCTCGCG‑‑G‑‑AATCCTCTTTGCAACTTGCCGTGCCGCGTATCGTGGCGCTCAAACCGAAAGCGATGCAGAAATCGTTCGGCGGCAACTA  >  NC_000913/4004890‑4005063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: