| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,008,429 | +TG | coding (512/516 nt) | b4555 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,008,429 | 1 | . | T | 98.5% | 1011.6 / 3.6 | 262 | L171W (TTG→TGG) | b4555 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); major base T (129/128); minor base G (2/2); total (131/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.55e-01 | |||||||||||
| * | NC_000913 | 4,008,429 | 2 | . | G | 98.1% | 1007.7 / 8.2 | 261 | coding (512/516 nt) | b4555 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base . (2/3); new base G (128/128); total (130/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.38e-01 | |||||||||||
Only 100 of 291 total aligned reads displayed.
CTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTAC‑AG‑C‑TGAAGGATT‑G‑ATTGC‑G‑TT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑GGGAAA‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAG > NC_000913/4008343‑4008522 || tGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑ttt < 2:2926582/96‑2 (MQ=255) tGTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑ttt < 2:5615949/96‑2 (MQ=255) tGTCTGGAAGTGATGGCGGGCGGAGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑ttt < 1:12583935/96‑2 (MQ=255) gTCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttg < 1:9864495/96‑3 (MQ=255) tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttgg < 2:9061588/96‑4 (MQ=255) tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttgg < 2:8962905/96‑4 (MQ=255) tCTGGAAGTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑tttgg > 2:7833193/1‑93 (MQ=255) gTGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACggg < 2:10822895/96‑1 (MQ=255) tGATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGa > 2:5270993/1‑96 (MQ=255) gATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑GCTTG‑GTGACGGGAt < 1:10980536/96‑1 (MQ=255) gATGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AG‑CATGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGAt < 2:10216733/96‑1 (MQ=255) aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATg < 1:13060395/96‑1 (MQ=255) aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATg < 1:11708699/96‑1 (MQ=255) aTGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATg < 2:161048/96‑1 (MQ=255) tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGa > 2:4766450/1‑96 (MQ=255) tGGCGGGCGGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGa > 2:4463195/1‑96 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGACGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGTTGaa > 1:12912062/1‑96 (MQ=255) ggcgggcgGCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGaa < 1:13237122/96‑1 (MQ=255) gcgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAac < 1:5164257/96‑1 (MQ=255) gcgggcggCGTTTCAAAAGGACATGCCCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAac < 1:7028547/96‑1 (MQ=255) cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGCAGGATT‑GTAGTGC‑G‑TTTGGTGACGGGATGAacg > 1:10184571/1‑96 (MQ=255) cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg < 2:2577626/96‑1 (MQ=255) cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg < 1:13978146/96‑1 (MQ=255) cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg > 1:13181770/1‑96 (MQ=255) cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacg < 1:7580615/96‑1 (MQ=255) cgggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGA‑G‑TTTGGTGACGGGATGAacg > 2:9604794/1‑96 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 2:13250770/1‑96 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 2:10446427/1‑96 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 2:6681137/1‑96 (MQ=255) gggcggCGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga > 1:6278348/1‑96 (MQ=255) gggcggCGTTTCAAAACGCCATGAGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga < 1:10357255/96‑1 (MQ=255) gggcggCGTGTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacga < 1:380389/96‑1 (MQ=255) gtcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgac < 1:12859185/94‑1 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTACAAC‑C‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgac < 2:7490016/96‑1 (MQ=255) ggcggcGTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgac > 1:4300846/1‑96 (MQ=255) gcggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAacgacg < 2:12997738/96‑1 (MQ=255) cggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGc < 2:6956805/96‑1 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc > 1:2674379/1‑96 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc > 1:7394350/1‑96 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc < 1:6889931/96‑1 (MQ=255) ggcgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGATAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGcc < 1:11448052/96‑1 (MQ=255) cgTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGa < 2:11320077/96‑1 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGaa > 1:9484328/1‑96 (MQ=255) gTTTCAAAAGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGaa > 2:7698105/1‑96 (MQ=255) ttcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAAt > 1:3199527/5‑96 (MQ=255) tcaaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGTTT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATg > 1:2924063/4‑96 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGca < 1:4128963/95‑2 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCt > 1:3482551/2‑96 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCt < 2:2208879/95‑1 (MQ=255) aaaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCt < 1:13381048/95‑1 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGTCTAAATGCTg > 1:4755740/1‑96 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTg < 1:14256729/96‑1 (MQ=255) aaaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTg > 1:7888015/1‑96 (MQ=255) aaGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGt < 1:4934091/96‑1 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGtt < 1:8861793/96‑2 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 1:3023630/1‑96 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 2:1856400/1‑96 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc < 1:1745716/96‑1 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 1:4364937/1‑96 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTc > 2:8011587/1‑96 (MQ=255) aGGCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTCACGGGATGAACGACGCCGAAATGCTGTc < 2:13877228/96‑1 (MQ=255) ggCCATGCGCTGGAAGCGGTGGCGAAGAAACTGGGCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCg < 2:8494437/96‑1 (MQ=255) actgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAg < 2:6198175/92‑1 (MQ=255) ctgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGt > 1:7196977/4‑96 (MQ=255) ctgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGt < 2:4202135/93‑1 (MQ=255) tgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTg > 2:14020536/3‑96 (MQ=255) tgggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTg > 1:1895113/3‑96 (MQ=255) gggCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgc < 2:3477950/95‑2 (MQ=255) gCTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgc < 2:3449894/96‑4 (MQ=255) cTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgca < 2:4300846/96‑5 (MQ=255) cTAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTgcgca > 2:198723/1‑92 (MQ=255) tAC‑AGCC‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTAt > 2:14250077/1‑83 (MQ=255) cagcc‑TGAAGGATT‑GTATTGCGG‑TTG‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca > 2:1354987/5‑96 (MQ=255) cagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca < 1:5473224/92‑1 (MQ=255) cagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca < 1:14422890/92‑1 (MQ=255) cagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca < 2:3572644/92‑1 (MQ=255) aagcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCg‑cacca > 1:11336053/5‑96 (MQ=255) agcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAg < 1:9290859/93‑1 (MQ=255) agcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAg > 1:8056151/4‑96 (MQ=255) gcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGc > 2:7169485/3‑96 (MQ=255) gcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGc > 2:7100183/3‑96 (MQ=255) gcc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGc < 2:12303177/94‑1 (MQ=255) cc‑TGAAGGTTT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCg > 1:5969647/2‑96 (MQ=255) cc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCg > 1:4988502/2‑96 (MQ=255) cc‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCg < 1:13504482/95‑1 (MQ=255) c‑TGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGt > 2:9355629/1‑96 (MQ=255) taaaGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc > 1:10632480/3‑96 (MQ=255) tGAAGGTTT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGGCC‑GGCAAAGG‑CTGCATTATGGGCAGTGAG‑CACCAGCGTc > 1:10000040/1‑96 (MQ=255) tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCgcc > 2:5818650/1‑94 (MQ=255) tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc > 2:12779655/1‑96 (MQ=255) tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc < 2:1903279/96‑1 (MQ=255) tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTc > 1:4647802/1‑96 (MQ=255) tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGGGCG‑CACCAGCGTc > 1:330447/1‑96 (MQ=255) tGAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGC‑GAGGCGCACCAGCggc > 1:6507775/1‑94 (MQ=255) gAATGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCt > 2:10116508/1‑96 (MQ=255) gAAGGATTGG‑ATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTAGGGGCAGTGCG‑CACCAGCGTCt > 1:7330067/1‑96 (MQ=255) gAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCt < 2:3199527/96‑1 (MQ=255) gAAGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCt < 2:9543819/96‑1 (MQ=255) aGGATT‑GTATTGC‑G‑TTTGGTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAAGG‑CTGCATTATGGGCAGTGCG‑CACCAGCGTCTGa > 2:11942376/1‑96 (MQ=255) t‑‑gtgACGGGATGAACGACGCCGAAATGCTGTCGATGG‑CGGGGAAA‑GTCTCCATTATGGGCAGTGCG‑CACCAGCGTCTGAAAGACCTTCATCCCGAg < 2:4064943/96‑1 (MQ=255) || CTGTCTGGAAGTGATGGCGGGCGGCGTTTC‑AAAGGCCATGCGCTGGAAG‑GCTGGCG‑‑‑‑AACT‑GGCTAC‑AG‑C‑TGAAGGATT‑G‑ATTGC‑G‑TT‑‑GTGACGGGATGAACGACGCCGAAATGCTGTCGATGG‑C‑GGGAAA‑G‑CTGCATTATGGGCAGTGGC‑CACCAGCGTCTGAAAGACCTTCATCCCGAG > NC_000913/4008343‑4008522 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |