Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,057,759 +C coding (1773/1776 nt) yihK → putative GTP‑binding factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,057,7581.C98.0% 1941.0 / 21.9 495coding (1772/1776 nt)yihKputative GTP‑binding factor
Reads supporting (aligned to +/- strand):  ref base . (1/9);  new base C (207/277);  total (209/286)
Fisher's exact test for biased strand distribution p-value = 5.02e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 546 total aligned reads displayed.

GCCTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA  >  NC_000913/4057663‑4057848
                                                                                                  |                                                                                          
gCCTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCa                                                                                             >  2:4690422/1‑96 (MQ=255)
 ccTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCAc                                                                                           <  1:3965029/96‑1 (MQ=255)
 ccTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCAc                                                                                           >  2:8668146/1‑96 (MQ=255)
 ccTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCAc                                                                                           >  2:3548526/1‑96 (MQ=255)
  cTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCAcc                                                                                          <  2:13102232/96‑2 (MQ=255)
       cGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACg                                                                                      <  1:4724398/96‑1 (MQ=255)
          aTGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaa                                                                                   <  1:12519220/96‑1 (MQ=255)
           tGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGaaa                                                                                  >  1:8689628/1‑96 (MQ=255)
              ctctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACg                                                                               >  1:5086534/1‑96 (MQ=255)
              ctctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACg                                                                               >  1:8034035/1‑96 (MQ=255)
                ctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAt                                                                             <  1:6543261/96‑1 (MQ=255)
                ctGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAt                                                                             <  2:13395831/96‑1 (MQ=255)
                  ggAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcg                                                                           <  2:4383051/96‑1 (MQ=255)
                   gAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgt                                                                          <  2:8843393/96‑1 (MQ=255)
                    aaCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgtc                                                                         <  1:8538071/96‑1 (MQ=255)
                     aCAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgtcg                                                                        <  1:11800665/96‑1 (MQ=255)
                      cAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGAtcgtccc                                                                       <  1:3361039/96‑3 (MQ=255)
                      cAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgc                                                                       <  1:6981180/96‑1 (MQ=255)
                       aaGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGCCTCCCACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgcc                                                                      <  2:5046743/96‑1 (MQ=255)
                       aaGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTcgcc                                                                      >  1:9497867/1‑96 (MQ=255)
                         gCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCTCCTGACGGAAAACGATCGTcgccgc                                                                    <  1:7168766/96‑1 (MQ=255)
                          ctctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCcgcg                                                                   >  1:12453700/1‑96 (MQ=255)
                          ctctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCcgcg                                                                   >  1:8862944/1‑96 (MQ=255)
                           tctGGAGTTCATCGCTGATGACGCACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCgcgc                                                                  <  1:7402400/96‑1 (MQ=255)
                            ctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGcc                                                                 <  1:2806157/96‑1 (MQ=255)
                            ctGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGcc                                                                 >  1:12051520/1‑96 (MQ=255)
                                aGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc                                                             >  1:13646859/1‑96 (MQ=255)
                                aGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc                                                             >  2:1908310/1‑96 (MQ=255)
                                aGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc                                                             <  2:9482887/96‑1 (MQ=255)
                                aGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc                                                             <  2:9782958/96‑1 (MQ=255)
                                aGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTACCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAcc                                                             <  1:5715429/96‑1 (MQ=255)
                                 gTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcg                                                            >  2:2092475/1‑96 (MQ=255)
                                 gTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcg                                                            <  2:11793239/96‑1 (MQ=255)
                                  ttCATCGATGATGACGAACTGGTAGAAGTGCCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAAgcgc                                                           <  2:12563460/96‑1 (MQ=255)
                                  ttCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCCCCTGACGGAAAACGATCGTCGCCGCGCCAACcgc                                                           <  2:6001438/96‑1 (MQ=255)
                                  ttCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACcgc                                                           <  2:8435292/96‑1 (MQ=255)
                                    cATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCgcgc                                                         >  1:2984876/1‑96 (MQ=255)
                                     aTCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCa                                                        <  1:10683265/96‑1 (MQ=255)
                                       cGATGATGACGAACTGGTAGAAGTGACTCCGCCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc                                                      <  2:2509877/96‑1 (MQ=255)
                                       cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc                                                      <  1:1986318/96‑1 (MQ=255)
                                       cGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCAcc                                                      <  1:11536472/96‑1 (MQ=255)
                                        gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACTGCGCACCg                                                     >  1:165694/1‑96 (MQ=255)
                                        gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCg                                                     >  2:4036047/1‑96 (MQ=255)
                                        gatgatGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCg                                                     <  2:14400193/96‑1 (MQ=255)
                                        gatgatGACGAACCGGTAGAAGTGACTCCGACCTCTATGCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCg                                                     >  1:13866543/1‑96 (MQ=255)
                                          tgatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaa                                                   >  2:10551342/1‑96 (MQ=255)
                                           gatgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGaaa                                                  >  2:14246882/1‑96 (MQ=255)
                                            atgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTTACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAg                                                 <  2:10394215/96‑1 (MQ=255)
                                            atgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAg                                                 <  1:4475898/96‑1 (MQ=255)
                                             tgaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGa                                                <  2:9203586/96‑1 (MQ=255)
                                              gaCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAggc                                               <  1:10831539/96‑3 (MQ=255)
                                               atgAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACg                                              <  1:10435056/94‑1 (MQ=255)
                                               aCGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACg                                              >  2:13823785/1‑96 (MQ=255)
                                                 gAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGAt                                            <  1:5505851/96‑1 (MQ=255)
                                                     aggTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAt                                        >  2:7920112/2‑96 (MQ=255)
                                                       gTAGAAGTGCCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAttt                                      <  1:13338294/96‑1 (MQ=255)
                                                       gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAttt                                      <  2:12208236/96‑1 (MQ=255)
                                                       gTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAAttt                                      >  1:12684360/1‑96 (MQ=255)
                                                        tAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTc                                     <  2:3807187/96‑1 (MQ=255)
                                                             gTGCCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttt                                <  2:10061148/96‑1 (MQ=255)
                                                              tGACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGACAGACGATTAATTTCGttttt                               >  2:8297395/1‑96 (MQ=255)
                                                               taCTCCAACCTCTATCCGTATTAGTAAACGTCACCTGACGTAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttttt                              <  1:2632609/95‑1 (MQ=255)
                                                               gACTCCGCCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttttt                              <  1:2375701/96‑1 (MQ=255)
                                                               gACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttttt                              <  2:630366/96‑1 (MQ=255)
                                                               gACTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGtttttt                              <  1:7758966/96‑1 (MQ=255)
                                                                aCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCTTTTTTTa                             >  1:6484870/1‑96 (MQ=255)
                                                                aCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTa                             <  2:2788738/96‑1 (MQ=255)
                                                                aCTCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTa                             <  1:3716826/96‑1 (MQ=255)
                                                                  tCCGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGt                           >  2:6666883/1‑96 (MQ=255)
                                                                    cGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTATTTTCGTTTTTTAGTCa                         >  1:10340463/1‑96 (MQ=255)
                                                                    cGACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCa                         >  2:694047/1‑96 (MQ=255)
                                                                     gACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt                        >  2:4903539/1‑96 (MQ=255)
                                                                     gACCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCAt                        >  2:3184966/1‑96 (MQ=255)
                                                                      aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa                       >  1:4679307/1‑96 (MQ=255)
                                                                      aCCTCTATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGAGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATa                       <  2:12895474/96‑1 (MQ=255)
                                                                       ccTCTATCCGTATTCGTAAACGTCCCCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaa                      <  2:11475837/96‑1 (MQ=255)
                                                                        ctctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaa                     >  1:2225529/1‑96 (MQ=255)
                                                                         tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGTCGATTAATTTCGTTTTTTAGTCATaaaa                    >  1:12252075/1‑96 (MQ=255)
                                                                         tctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaa                    >  1:9312901/1‑96 (MQ=255)
                                                                          ctATCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATaaaaa                   >  1:4869620/1‑96 (MQ=255)
                                                                            aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc                 <  2:2994282/96‑1 (MQ=255)
                                                                            aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc                 <  2:9063100/96‑1 (MQ=255)
                                                                            aTCCGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAAc                 >  1:3163790/1‑96 (MQ=255)
                                                                              ccGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCt               >  2:562498/1‑96 (MQ=255)
                                                                                 tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGcc            >  2:10896802/1‑96 (MQ=255)
                                                                                 tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGcc            >  2:652022/1‑96 (MQ=255)
                                                                                  aTTCGTAAACGTAACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCa           <  2:7202026/96‑1 (MQ=255)
                                                                                   ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg          <  2:12068465/96‑1 (MQ=255)
                                                                                   ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg          <  1:633319/96‑1 (MQ=255)
                                                                                   ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg          <  1:9168534/96‑1 (MQ=255)
                                                                                    tCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGc         >  1:10011767/1‑96 (MQ=255)
                                                                                     cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCg        <  2:7414142/96‑1 (MQ=255)
                                                                                     cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCg        >  2:7546203/1‑96 (MQ=255)
                                                                                       tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt      <  1:5962130/96‑1 (MQ=255)
                                                                                        aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGGAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg     >  1:2127719/1‑96 (MQ=255)
                                                                                        aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATg     <  1:1288685/96‑1 (MQ=255)
                                                                                         aaCGTCACCTGACGGAAAACGATCGTCGCGGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg    >  1:8337130/1‑96 (MQ=255)
                                                                                         aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg    >  2:5261935/1‑96 (MQ=255)
                                                                                         aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg    >  1:14304483/1‑96 (MQ=255)
                                                                                          aCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc   >  1:7574173/1‑96 (MQ=255)
                                                                                                  |                                                                                          
GCCTATCCGCATGACTCTGGAACAAGCTCTGGAGTTCATCGATGATGACGAACTGGTAGAAGTGACTCCGACCTCTATCCGTATTCGTAAACGTCACTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCA  >  NC_000913/4057663‑4057848

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: