Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,593,336 +G intergenic (‑23/‑208) yjjM ← / → yjjN hypothetical protein/putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,593,3351.G99.8% 1954.0 / ‑4.1 499intergenic (‑22/‑209)yjjM/yjjNhypothetical protein/putative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base . (1/0);  new base G (252/246);  total (253/246)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01

Only 100 of 545 total aligned reads displayed.

ACCTGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT  >  NC_000913/4593240‑4593425
                                                                                                |                                                                                          
aCCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                             <  1:8565467/96‑1 (MQ=255)
aCCTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATATTGTACATTTCCGCCAGCGCACTTTGCGAt                                                                                             >  2:14107785/1‑96 (MQ=255)
 ccTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATg                                                                                           >  2:10050532/1‑96 (MQ=255)
 ccTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATg                                                                                           >  2:7638882/1‑96 (MQ=255)
 ccTGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATg                                                                                           <  1:8849712/96‑1 (MQ=255)
   tGCGTCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATgga                                                                                         <  1:3320120/96‑3 (MQ=255)
       tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTg                                                                                      >  1:14356657/1‑96 (MQ=255)
       tCAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTg                                                                                      <  1:13619345/96‑1 (MQ=255)
        cAAGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCCCTTTGCGATGGAAGTgg                                                                                     <  2:4927566/96‑1 (MQ=255)
         aaGACGCCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGGGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTggg                                                                                    >  2:3451128/1‑96 (MQ=255)
            acgccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGaa                                                                                 >  1:6132187/5‑96 (MQ=255)
            acgccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGaa                                                                                 <  2:5542894/92‑1 (MQ=255)
              gccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAgg                                                                               <  2:12089985/94‑1 (MQ=255)
              gccgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAgg                                                                               >  2:11012252/3‑96 (MQ=255)
                cgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGa                                                                             <  1:1588681/96‑1 (MQ=255)
                cgcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGa                                                                             <  2:687413/96‑1 (MQ=255)
                 ggaTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTTCGATGGAAGTGGGGAAGGGat                                                                            >  1:3102135/3‑96 (MQ=255)
                 gcATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGat                                                                            <  2:11208525/96‑1 (MQ=255)
                  cATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                           >  2:6681914/1‑96 (MQ=255)
                  cATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGata                                                                           >  2:5803948/1‑96 (MQ=255)
                   aTTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGatat                                                                          <  1:12596368/96‑1 (MQ=255)
                    ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATg                                                                         <  1:6290106/96‑1 (MQ=255)
                    ttCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATg                                                                         <  1:4709097/96‑1 (MQ=255)
                     tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGa                                                                        <  1:7952766/96‑1 (MQ=255)
                     tCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGa                                                                        <  1:2679605/96‑1 (MQ=255)
                        cgTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAccc                                                                     >  2:3232087/1‑96 (MQ=255)
                         gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                    <  2:2746012/96‑1 (MQ=255)
                         gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                    <  2:4192284/96‑1 (MQ=255)
                         gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                    <  1:4829351/96‑1 (MQ=255)
                         gTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGAcccc                                                                    >  1:4586019/1‑96 (MQ=255)
                          tAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcg                                                                   <  2:7394233/96‑1 (MQ=255)
                           aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCGCTTTGCGATGGAAGTGGGGAAGGGATATGACCCcgc                                                                  <  2:2428637/96‑1 (MQ=255)
                           aaGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCcgc                                                                  <  2:7813994/96‑1 (MQ=255)
                             gTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCgcgc                                                                >  2:6319103/1‑96 (MQ=255)
                               ggCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCa                                                              >  2:3925046/1‑96 (MQ=255)
                               ggCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCa                                                              >  1:7123714/1‑96 (MQ=255)
                                     gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcat                                                        >  1:8304272/1‑96 (MQ=255)
                                     gaATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTACGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcat                                                        >  1:10895279/1‑96 (MQ=255)
                                      aaTATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATatcatc                                                       >  1:1958957/1‑96 (MQ=255)
                                       atatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGTCATTtcatca                                                      >  1:13343888/1‑96 (MQ=255)
                                        tatGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCaa                                                     >  2:9254822/1‑96 (MQ=255)
                                          tGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATg                                                   <  2:9067243/96‑1 (MQ=255)
                                           gACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGa                                                  >  1:10026737/1‑96 (MQ=255)
                                           gACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGa                                                  >  1:4276904/1‑96 (MQ=255)
                                            aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGGGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAc                                                 >  2:10326279/1‑96 (MQ=255)
                                            aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAc                                                 <  1:8133343/96‑1 (MQ=255)
                                            aCGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAc                                                 <  2:1915302/96‑1 (MQ=255)
                                             cGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGAcc                                                <  1:2555600/96‑1 (MQ=255)
                                               cACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATACGACCCCGCGCCATATCATCAATGACCTg                                              <  1:6867054/96‑1 (MQ=255)
                                                  tgtgGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGGCCCCGCGCCATATCATCAATGACCTGGtt                                           <  2:10833470/96‑1 (MQ=255)
                                                   gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCTCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTa                                          <  2:567642/96‑1 (MQ=255)
                                                   gtggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTa                                          >  2:2715199/1‑96 (MQ=255)
                                                     ggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAAt                                        >  1:5858483/1‑96 (MQ=255)
                                                     ggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAAt                                        <  1:547468/96‑1 (MQ=255)
                                                     ggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAAt                                        <  2:13592999/96‑1 (MQ=255)
                                                     ggtgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAAt                                        >  2:6442556/1‑96 (MQ=255)
                                                       tgCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATca                                      <  1:1026099/96‑1 (MQ=255)
                                                          tgatGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAt                                   <  2:4549588/93‑1 (MQ=255)
                                                          ggCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATAACAt                                   <  2:5111164/96‑1 (MQ=255)
                                                           gCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAtt                                  >  2:11692652/1‑96 (MQ=255)
                                                           gCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACAtt                                  <  1:13547777/96‑1 (MQ=255)
                                                            cTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtg                                 <  2:6132187/96‑1 (MQ=255)
                                                              gATGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATtgtg                               >  2:1434679/1‑96 (MQ=255)
                                                               gtgttgtACATTTCCGCCAGCGCACTTTGCGGTGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTACTCACATTGTgg                              >  1:11310646/2‑96 (MQ=255)
                                                               aTGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                              <  2:13045298/96‑1 (MQ=255)
                                                               aTGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                              <  2:8031074/96‑1 (MQ=255)
                                                               aTGTTGTACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTgg                              >  1:7839635/1‑96 (MQ=255)
                                                                tgttgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGTCCTGGTTAATCACATTGTGGc                             <  1:1167930/96‑1 (MQ=255)
                                                                  ttgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGt                           >  2:8613713/1‑96 (MQ=255)
                                                                   tgtACATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTa                          <  1:9865073/96‑1 (MQ=255)
                                                                       cATTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGGTAATCACATTGTGGCGTAAAtt                      >  1:2337014/1‑96 (MQ=255)
                                                                        aTTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAttt                     <  1:13266814/96‑1 (MQ=255)
                                                                        aTTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAttt                     >  1:6572110/1‑96 (MQ=255)
                                                                        aTTTCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAAttt                     >  2:10464046/1‑96 (MQ=255)
                                                                          ttCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtg                   <  1:7629253/96‑1 (MQ=255)
                                                                          ttCCGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTtg                   <  2:87917/96‑1 (MQ=255)
                                                                             cGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGCCCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa                <  1:752769/96‑1 (MQ=255)
                                                                             cGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa                >  1:12967540/1‑96 (MQ=255)
                                                                             cGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa                <  2:7914852/96‑1 (MQ=255)
                                                                             cGCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGa                <  1:4972006/96‑1 (MQ=255)
                                                                              gCCAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGaa               <  2:12233756/96‑1 (MQ=255)
                                                                               ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc              >  1:9502652/1‑96 (MQ=255)
                                                                               ccAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc              <  2:289395/96‑1 (MQ=255)
                                                                               ccAACGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAAc              >  2:12593041/1‑96 (MQ=255)
                                                                                ctgcgcACTTTGCGATGGAAGTGGGGAAGGGATAGGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATGGTGGCGTAAATTTTGTGAACg             >  1:9339841/3‑96 (MQ=255)
                                                                                cAGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACg             <  2:8286335/96‑1 (MQ=255)
                                                                                 aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCGCATTGTGGCGTAAATTTTGTGAACGa            <  1:12218688/96‑1 (MQ=255)
                                                                                 aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGa            >  1:3977066/1‑96 (MQ=255)
                                                                                 aGCGCACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGa            <  2:2132407/96‑1 (MQ=255)
                                                                                  gcgcACTCTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGAc           <  1:8444944/96‑1 (MQ=255)
                                                                                   cgcACTTTGCGATGGAAGTGGGGAAGGGATATGTCCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACt          <  2:13796463/96‑1 (MQ=255)
                                                                                    gcACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTc         >  1:12825427/1‑96 (MQ=255)
                                                                                    gcACTTTGCGATGGAAGTGGGGAAGGGAGATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTc         >  2:9459605/1‑96 (MQ=255)
                                                                                     cgcTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa        >  1:10513171/3‑96 (MQ=255)
                                                                                     cACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa        >  2:3597092/1‑96 (MQ=255)
                                                                                     cACTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCa        >  2:13514543/1‑96 (MQ=255)
                                                                                      aCTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCat       >  1:5053620/1‑96 (MQ=255)
                                                                                       cTTTGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCata      >  1:13861857/1‑96 (MQ=255)
                                                                                          tGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAttt   <  1:3641668/96‑1 (MQ=255)
                                                                                          tGCGATGGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATAttt   >  2:9803770/1‑96 (MQ=255)
                                                                                                |                                                                                          
ACCTGCGTCAAGACCGCGCATTCGCGTAAGTGGCTGAGAATATGACGCACTGTGGTGCGGCTGATGTTGTACATTTCCGCCAGCGCACTTTGCGATGAAGTGGGGAAGGGATATGACCCCGCGCCATATCATCAATGACCTGGTTAATCACATTGTGGCGTAAATTTTGTGAACGACTCATATTTT  >  NC_000913/4593240‑4593425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: